DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004746 mmu-miR-409-5p 70392 Asb12 uacgUUUCAACGAGCCCAUUGGa ||| | | ||||||| uccaAAAAUAAACCUGGUAACCc 2 20 40 62 [mm9:X:92665613-92665635:-] 0.5548 147 7 -11.83 -0.8319 MIMAT0003186 mmu-miR-369-3p 70392 Asb12 uuUCUAGUUGGUACAUAAUAa | ||: : : ||||||| uaACAUUUCUGGCGUAUUAUu 2 20 91 111 [mm9:X:92665564-92665584:-] 0.5535 143 7 -6.72 -0.2769 MIMAT0005460 mmu-miR-1224 70392 Asb12 gagguggaggggucAGGAGUg |||||| uuuccacaacaaaaUCCUCAg 2 8 111 131 [mm9:X:92665544-92665564:-] 0.5505 120 6 -19.47 -0.1035 MIMAT0015219 mmu-miR-3475 70392 Asb12 aaGUUUGGUAC-ACGGAGGUcu :|| |||| | |||||| ccUAAUGCAUGAUACCUCCAaa 3 20 24 45 [mm9:X:92665630-92665651:-] 0.5538 138 0 -14.58 -0.2749 MIMAT0003477 mmu-miR-669a 70392 Asb12 uguacuuguacguguGUGUUGa |||||| uggcguauuauuuucCACAACa 2 8 100 121 [mm9:X:92665554-92665575:-] 0.5535 120 6 -9.40 -0.2454 MIMAT0003470 mmu-miR-691 70392 Asb12 aaaAGACGGAGAGA-AGUCCUUa |:| | ||:| ||||||| aagUUUUCAACUUUCUCAGGAAc 2 20 2 24 [mm9:X:92665651-92665673:-] 0.5543 154 7 -19.18 -0.5403 MIMAT0004848 mmu-miR-883a-5p 70392 Asb12 cauugacgaugaagaGAGUCGu |||||| uuccacaacaaaaucCUCAGCa 2 8 112 133 [mm9:X:92665542-92665563:-] 0.5505 120 6 -12.70 -0.1677 MIMAT0005836 mmu-miR-1186 70392 Asb12 guacggaaaUUAAG-GUCGUGag ||| | |||||| ccacaacaaAAUCCUCAGCACag 3 14 114 136 [mm9:X:92665539-92665561:-] 0.5505 128 0 -9.79 -0.1487 MIMAT0007863 mmu-miR-1902 70392 Asb12 uucagUACGGAUGACGUGGAGa :|| || | |||||| cuugaGUGAAUAAUACACCUCa 2 18 69 90 [mm9:X:92665585-92665606:-] 0.5564 125 6 -12.57 -0.2076 MIMAT0007864 mmu-miR-1897-5p 70392 Asb12 gggggagaaagagguAGGUUUc |||||| cuaaugcaugauaccUCCAAAa 2 8 25 46 [mm9:X:92665629-92665650:-] 0.5538 120 6 -8.82 -0.1391 MIMAT0009404 mmu-miR-1940 70392 Asb12 uugacgagguggaagagucaGGAGGUa |||||| caggaaccuaaugcaugauaCCUCCAa 2 8 18 44 [mm9:X:92665631-92665657:-] 0.5538 120 6 -14.89 -0.2297 MIMAT0009418 mmu-miR-669l 70392 Asb12 uguauauguacguguGUGUUGa |||||| uggcguauuauuuucCACAACa 2 8 100 121 [mm9:X:92665554-92665575:-] 0.5535 120 6 -11.83 -0.2476 MIMAT0009421 mmu-miR-669o 70392 Asb12 uguauUUGUACGUGUGUGUUGau | :|| : | |||||| ggcguAUUAUUUUC-CACAACaa 3 19 101 122 [mm9:X:92665553-92665574:-] 0.5535 124 0 -10.73 -0.1203 MIMAT0009440 mmu-miR-1967 70392 Asb12 cgUAGAA-GAGGGGUCCUAGGAGu ||:|| | | || |||||| uuAUUUUCCACAACAAAAUCCUCa 2 22 107 130 [mm9:X:92665545-92665568:-] 0.5535 128 6 -19.20 -0.1132 MIMAT0011217 mmu-miR-2141 70392 Asb12 uugaaaagACUGUGGAGGa |||:|||||| cuaaugcaUGAUACCUCCa 2 12 25 43 [mm9:X:92665632-92665650:-] 0.5538 139 6 -17.52 -0.1801 MIMAT0012771 mmu-miR-432 70392 Asb12 gacGGGUGAC-UA-GAU-GAGGUUcu ||:| || || || |||||| gaaCCUAAUGCAUGAUACCUCCAAaa 3 21 21 46 [mm9:X:92665629-92665654:-] 0.5538 133 0 -16.24 -0.1219 MIMAT0015643 mmu-miR-3472 70392 Asb12 ccaAGGAAGGUCGAAGACCG-AUAAu || | || :||||||| |||| accUCAUAACA-UUUCUGGCGUAUUa 2 23 85 109 [mm9:X:92665566-92665590:-] 0.5564 132 0 -20.26 -0.9564 MIMAT0000235 mmu-miR-202-3p 70392 Asb12 agaaGGGUACGCGAUAUGGAGa |: |||| : ||||||| gaacCUAAUGCAUGAUACCUCc 2 19 21 42 [mm9:X:92665633-92665654:-] 0.5538 158 7 -19.03 -0.7758 MIMAT0000533 mmu-miR-26a 70392 Asb12 ucggAUAGGACCUAAUGAACUu || || |:|||||||| cuggUAACCCAGGUUACUUGAg 2 19 53 74 [mm9:X:92665601-92665622:-] 0.5548 162 7 -17.79 -0.5549 MIMAT0000534 mmu-miR-26b 70392 Asb12 uggAUAGGACUUAAUGAACUu || || ::|||||||| uggUAACCCAGGUUACUUGAg 2 19 54 74 [mm9:X:92665601-92665621:-] 0.5548 158 7 -15.42 -0.5549 MIMAT0000663 mmu-miR-218 70392 Asb12 uguaccaaucuaguUCGUGUu |||||| acaacaaaauccucAGCACAg 2 8 116 136 [mm9:X:92665539-92665559:-] 0.5505 120 6 -9.63 -0.1819 MIMAT0001076 mmu-miR-384-3p 70392 Asb12 uaaCACUUGUU-AAAGA-UCCUUa || ||| ||||| ||||| uaaGUUUUCAACUUUCUCAGGAAc 2 20 1 24 [mm9:X:92665651-92665674:-] 0.5543 126 0 -11.67 -0.6791 MIMAT0001420 mmu-miR-433 70392 Asb12 uguGGCUCCUCGGG-UA-GUACUa |: |||| ||: || ||||| uuuCUCAGGAACCUAAUGCAUGAu 2 20 13 36 [mm9:X:92665639-92665662:-] 0.5538 126 0 -18.16 -0.7024 MIMAT0003780 mmu-miR-490 70392 Asb12 gucguaccUCAGGAGGUCCAAc :|| ||||||| auaaaccuGGUAACCCAGGUUa 2 15 47 68 [mm9:X:92665607-92665628:-] 0.5548 142 7 -17.57 -0.7337

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G091939 Asb12 Mus musculus 70392

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Asb12 mmu-miR-202-3p beg:25 end:42 pic:3' AGAAGGGTACGCGATATGGAGA 5'& |||| ||||||| &5' -------ATGCATGATACCTC- 3' Asb12 mmu-miR-490 beg:51 end:68 pic:3' GTCGTACCTCAGGAGGTCCAAC 5'& ||| | ||||||| &5' -----TGGTAA-C-CCAGGTT- 3' Asb12 mcmv-miR-m108-2-5p.2 beg:62 end:78 pic:3' CACTGGCGAGCGCTGCTCACT 5'& |.| .|||||| &5' ------GTTACT--TGAGTGA 3' Asb12 mmu-miR-145star beg:10 end:24 pic:3' GTTCTTGTCATAAAG-GTCCTTA 5'& |||| |||||| &5' -----------TTTCTCAGGAA- 3' Asb12 mmu-miR-1953 beg:0 end:20 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |||..| |||||||.|| &5' ---AAGTTTTC-AACTTTCTCA 3' Asb12 mmu-miR-1967 beg:99 end:131 pic:3' CGTAG---AAGAGGG---GTCCTAGGAGT 5'& ||.| ||.||| || ||||||| &5' GCGTATTATTTTCCACAACAAAATCCTCA 3' Asb12 mmu-miR-26a beg:57 end:74 pic:3' TCGGATAGGACCTAATGAACTT 5'& || |.||||||||. &5' -------CCCAGGTTACTTGAG 3' Asb12 mmu-miR-26b beg:57 end:74 pic:3' TGGATAGGACTTAATGAACTT 5'& || ..||||||||. &5' ------CCCAGGTTACTTGAG 3' Asb12 mmu-miR-409-3p beg:81 end:99 pic:3' TCCCCAAGTGGCTCGTTGTAAG 5'& |||| .||||||. &5' -------CACCTCATAACATTT 3' Asb12 mmu-miR-450a-3p beg:117 end:132 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& |||| ||||.||. &5' -------CAAA--ATCCTCAG- 3' Asb12 mmu-miR-450a-3p beg:24 end:45 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& |||||| |.|||| &5' ---AATGCATGATACCTCCAA- 3' Asb12 mmu-miR-691 beg:3 end:24 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& ||||| ||.|| ||||||| &5' TTTTCAA-CTTTC-TCAGGAA- 3' Asb12 mmu-miR-883a-5p beg:122 end:134 pic:3' CATTGACGATGAAGAGAGTCGT 5'& || ||||||| &5' ------------TC-CTCAGCA 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Asb12 mmu-miR-202 11 43 AGAAGGG----------UACGCGAUAUGGAGA |||:|: |||| ||||||| ACUUUCUCAGGAACCUAAUGCAUGAUACCUCC Asb12 mmu-miR-203 72 101 GAUCACCA-------GGAU--UUGUAAAGU |||| ||| |||||||| -GAGUGAAUAAUACACCUCAUAACAUUUCU Asb12 mmu-miR-206 87 118 -GGUG-UGUGAAGGA---AUGU---AAGGU- :||: |||:|||: ||: ||||| CUCAUAACAUUUCUGGCGUAUUAUUUUCCAC Asb12 mmu-miR-26a 51 76 CGGAUAGGACC--------UAAUGAACUU- ||||| :||||||||: -----ACCUGGUAACCCAGGUUACUUGAGU Asb12 mmu-miR-26b 49 76 -UUGGAUA---GGACUUAAUGAACUU- |||||: || ::||||||||: AAACCUGGUAACCCAGGUUACUUGAGU Asb12 mmu-miR-331 52 67 AAGAUCCUAUCCGGGUCCCCG ||:| |||||| -CCUGGUAA---CCCAGGU-- Asb12 mmu-miR-351 6 23 GUCCGAGUUUCCCGAGGAGUCCCU :|||| :|:|||||| ---UUUCAAC---UUUCUCAGGA- Asb12 mmu-miR-433-3p 10 38 -UGU--GGCUCCUCGGGUA--GUACUA- || |: |||| ||:| |||||| AACUUUCUCAGGAACCUAAUGCAUGAUA Asb12 mmu-miR-450b 16 34 AUAAGUCCUUGUAUGACGUUUU |||||||| || |||| --CUCAGGAACCUAAUGCAU-- Asb12 mmu-miR-464 38 60 AUAGAGUGUC-UUAUUUGAACCAU- ||| || ||||||| ||||| --CCUC-CAAAAAUAAACCUGGUAA Asb12 mmu-miR-490 29 59 GUCGUACCUCAGGAGGU-----------CCAAC ||||| |||||| ||| -UGCAUGAUA-CCUCCAAAAAUAAACCUGGUA- Asb12 mmu-miR-668 54 79 -CCAUCAC--CCGGCUCGGCUCACUGU |||| ||:: ::|||||| UGGUAACCCAGGUUAC-UUGAGUGAA- Asb12 mmu-miR-676 2 24 -UCG--AGUUGUUGGAGUCCUGCC ||: ||||| :||||||| AAGUUUUCAACUUUCUCAGGAA-- Asb12 mmu-miR-691 4 25 -AAAAGACGGAGAGAAGUCCUUA ||||| ||:|| ||||||| GUUUUCAA-CUUUC-UCAGGAAC Asb12 mmu-miR-804 60 94 AGGUCCA-----CUC-CUUGUU-----GAGUGU- |||||| ||| |||:|| ||||:| CCCAGGUUACUUGAGUGAAUAAUACACCUCAUAA Asb12 mmu-miR-203 93 100 GA-------------UCACCA-------GGAU--UUGUAAAGU |||| ||| |||||||| AACCCAGGUUACUUGAGUGAAUAAUACACCUCAUAACAUUUCU Asb12 mmu-miR-26a 67 74 C-------------------GGAUA---GGACCUAAUGAACUU |||: || |:||||||||: AUGAUACCUCCAAAAAUAAACCUGGUAACCCAGGUUACUUGAGU Asb12 mmu-miR-26b 67 74 ------------------UUGGAUA---GGACUUAAUGAACUU |||||: || ::||||||||: AUGAUACCUCCAAAAAUAAACCUGGUAACCCAGGUUACUUGAGU Asb12 mmu-miR-490 61 68 GU--CGUACCUCAGGA--------------------GGUCCAAC ||||| ||| ||||||| UAAUGCAUGAUA-CCUCCAAAAAUAAACCUGGUAACCCAGGUUA Asb12 mmu-miR-202 20 42 agaaGGG-UACGCGAUAUGGAGa ||: |||| : ||||||| ggaaCCTAATGCATGATACCTCc Asb12 mmu-miR-206 79 100 ggUGUGUGAAGGAAUGUAAGGu |:|||| || | |||||:| taATACACCTCATAACATTTCt Asb12 mmu-miR-26a 54 74 cggAUAGGACCUAAUGAACUu || || |:|||||||| tggTAACCCAGGTTACTTGAg Asb12 mmu-miR-26b 50 74 UUGG---AUAGGACUUAAUGAACUu |||| || || ::|||||||| AACCTGGTAACCCAGGTTACTTGAg Asb12 mmu-miR-331 49 68 aagaucCUAUCCGGGUCCccg |:|| |||||| aaacctGGTA-ACCCAGGtta Asb12 mmu-miR-351 2 23 gUCCGAGUUUCCCGAGGAGUCCcu || :|: || :|:|||||| aAGTTTTCAA--CTTTCTCAGGaa Asb12 mmu-miR-433-3p 13 36 uguGGCUCCUCGGG-UA-GUACUA |: |||| ||: || |||||| tttCTCAGGAACCTAATGCATGAT Asb12 mmu-miR-450b 14 46 auaAGUCCUUG----------UAU-GACGUUUU |||||||| ||| || ||||| ttcTCAGGAACCTAATGCATGATACCTCCAAAA Asb12 mmu-miR-464 36 58 AUAGAGUGUCUUAUUUGAACCAU || ||| | ||||||| ||||| TACCTCCAAAAATAAACCTGGTA Asb12 mmu-miR-490 49 68 gUCGUACCUCAGGAGGUCCAAc | | ||| | ||||||| aAACCTGGTAAC--CCAGGTTa Asb12 mmu-miR-668 55 79 CCAU--CACCCGGCUCGGCUCACUgu |||| ||:: | ::|||||| GGTAACCCAGGTT-ACTTGAGTGAat Asb12 mmu-miR-676 5 25 ucgAGUUGUUGGAGUCCUgcc ||||| :||||||| tttTCAACTTTCTCAGGAacc Asb12 mmu-miR-691 5 24 AAAAGACGGAGAGAAGUCCUUa ||||| ||:|| ||||||| TTTTC-AACTTTC-TCAGGAAc

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Asb12 RAID00087318 mmu-miR-384-3p miRNA MIMAT0001076 Asb12 mRNA 70392 Prediction 0.1828 Asb12 RAID00864294 mmu-miR-7674-5p miRNA MIMAT0029856 Asb12 mRNA 70392 Prediction 0.1828 Asb12 RAID01011836 mmu-miR-26a-5p miRNA MIMAT0000533 Asb12 mRNA 70392 Prediction 0.1828 Asb12 RAID01595746 mmu-miR-433-3p miRNA MIMAT0001420 Asb12 mRNA 70392 Prediction 0.1828 Asb12 RAID02236642 mmu-miR-218-5p miRNA MIMAT0000663 Asb12 mRNA 70392 Prediction 0.1828 Asb12 RAID02456409 mmu-miR-1843b-5p miRNA MIMAT0019345 Asb12 mRNA 70392 Prediction 0.1828 Asb12 RAID02478976 mmu-miR-490-3p miRNA MIMAT0003780 Asb12 mRNA 70392 Prediction 0.1828 Asb12 RAID02773386 mmu-miR-26b-5p miRNA MIMAT0000534 Asb12 mRNA 70392 Prediction 0.1828 Asb12 RAID03151483 mmu-miR-202-3p miRNA MIMAT0000235 Asb12 mRNA 70392 Prediction 0.1828