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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Mmu-063593
Ensembl Protein ID ENSMUSP00000114180.1
UniProt Accession P0CG50; E9QKI0; P02248; P02249; P02250; P62991; Q29120; Q62317; Q64223; Q8VCH1; Q91887; Q91888; Q9CXY4; Q9CZM0; Q9D1R5; Q9D8D9; Q9ET23; Q9ET24; Q9Z0H9; UBC_MOUSE
Genbank Protein ID AAG00512.1; AAG00513.1; BAA09096.1
Protein Name Polyubiquitin-C; Ubiquitin; Ubiquitin-related 1; Ubiquitin-related 2
Genbank Nucleotide ID AF285161; AF285162; AC138613
Gene Name Ubc
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000008348.9 ENSMUST00000136312.1 ENSMUSP00000114180.1
ENSMUSG00000008348.9 ENSMUST00000108707.2 ENSMUSP00000104347.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
microRNATRANSFACRAID2
Protein-protein Interaction
IIDiRefIndexPINAHINT
Mentha
Protein 3D Structure
PDBMMDB
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlusdbPTM
mUbiSiDa
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UBL/NEDD8 0 1199.0 609 684
ULD/UDP/UBQ/UBQ_PIM 5.50e-266 860.4 609 681
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
    m+i+vktLtgk+i++e+e+sdtie++k+++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
    89*************************************************************************9 PP
   


   ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
    m+++vktl+gk+++lev+++dt+e++K+ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++
   Q: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 681
    99********************************************************************986 PP
   

Organism Mus musculus
Functional Description
(View)

Functional Description



     Ubiquitin: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, DNA-damage responses as well as in signaling processes leading to activation of the transcription factor NF-kappa-B. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling.
Ubiquitin: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, DNA-damage responses as well as in signaling processes leading to activation of the transcription factor NF-kappa-B. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling.
Protein Sequence
(Fasta)
MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 60
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVEPSDTIE NVKAKIQDKE GIPPDQQRLI 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Mmu-063593|ULD,NEDD8;ULD,UBQ_PIM|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GAGGTCACCA ATGGGATCCC AGTGTGACAG GAGCCAAAGC CCTGGGTCCC CCTAGCGCGG 60
AAAGAAAACA GGGGGGGTGG GGGGTGGTGG CCTGACTAGG GGCGCCAGGC CGCGAAGCCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Mmu-063593|ULD,NEDD8;ULD,UBQ_PIM|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0832--Ubl conjugation

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0070062--C:extracellular exosome
GO:0005615--C:extracellular space
GO:0043209--C:myelin sheath
GO:0005654--C:nucleoplasm
GO:0005634--C:nucleus
GO:0002020--F:protease binding
GO:0003723--F:RNA binding
GO:0007623--P:circadian rhythm
GO:0007219--P:Notch signaling pathway
GO:0010992--P:ubiquitin homeostasis

KEGG mmu:22190
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Apl-003614 Anas platyrhynchos 99.64 3.00e-157 546.00
IUUC-Aca-004901 Anolis carolinensis 99.74 0.00e+00 751.00
IUUC-Aly-006562 Arabidopsis lyrata 92.48 0.00e+00 978.00
IUUC-Ath-006600 Arabidopsis thaliana 95.84 0.00e+00 873.00
IUUC-Ago-007937 Ashbya gossypii 96.05 0.00e+00 726.00
IUUC-Acl-008108 Aspergillus clavatus 95.74 9.00e-168 582.00
IUUC-Afl-008740 Aspergillus flavus 96.05 1.00e-167 582.00
IUUC-Ang-009646 Aspergillus niger 96.05 1.00e-166 578.00
IUUC-Aor-009964 Aspergillus oryzae 96.05 1.00e-167 582.00
IUUC-Ate-010298 Aspergillus terreus 96.05 1.00e-167 582.00
IUUC-Ame-011696 Astyanax mexicanus 97.63 0.00e+00 730.00
IUUC-Bci-013832 Botrytis cinerea 97.37 3.00e-169 587.00
IUUC-Bdi-015013 Brachypodium distachyon 96.05 0.00e+00 728.00
IUUC-Bol-015598 Brassica oleracea 95.84 0.00e+00 873.00
IUUC-Bra-017586 Brassica rapa 96.05 1.00e-124 438.00
IUUC-Cel-018571 Caenorhabditis elegans 97.75 0.00e+00 1366.00
IUUC-Cja-019812 Callithrix jacchus 99.74 0.00e+00 751.00
IUUC-Cfa-020579 Canis familiaris 99.74 0.00e+00 752.00
IUUC-Csa-024086 Chlorocebus sabaeus 100.00 5.00e-129 453.00
IUUC-Cin-025600 Ciona intestinalis 96.06 0.00e+00 731.00
IUUC-Csv-026265 Ciona savignyi 94.47 0.00e+00 1289.00
IUUC-Cne-026938 Cryptococcus neoformans 97.37 0.00e+00 878.00
IUUC-Dre-028641 Danio rerio 100.00 0.00e+00 1201.00
IUUC-Dno-029812 Dasypus novemcinctus 99.74 0.00e+00 752.00
IUUC-Dme-031690 Drosophila melanogaster 99.30 0.00e+00 1390.00
IUUC-Fso-038454 Fusarium solani 95.72 2.00e-167 581.00
IUUC-Ggr-040118 Gaeumannomyces graminis 96.05 1.00e-167 582.00
IUUC-Gac-042568 Gasterosteus aculeatus 99.34 0.00e+00 1192.00
IUUC-Gma-043881 Glycine max 95.87 0.00e+00 1016.00
IUUC-Ggo-044799 Gorilla gorilla 99.48 0.00e+00 749.00
IUUC-Hsa-046405 Homo sapiens 99.85 0.00e+00 1350.00
IUUC-Itr-048563 Ictidomys tridecemlineatus 95.60 8.00e-45 171.00
IUUC-Kpa-049199 Komagataella pastoris 96.05 7.00e-168 582.00
IUUC-Lma-053015 Leptosphaeria maculans 94.84 7.00e-168 583.00
IUUC-Laf-053548 Loxodonta africana 99.74 0.00e+00 752.00
IUUC-Mcc-055561 Macaca mulatta 99.51 0.00e+00 1200.00
IUUC-Mor-056991 Magnaporthe oryzae 96.05 1.00e-167 582.00
IUUC-Mpo-057384 Magnaporthe poae 96.05 1.00e-167 582.00
IUUC-Mtr-058240 Medicago truncatula 95.36 0.00e+00 1342.00
IUUC-Mla-058957 Melampsora laricipopulina 95.86 0.00e+00 1016.00
IUUC-Mmr-061259 Microcebus murinus 94.32 1.00e-118 418.00
IUUC-Mdo-062630 Monodelphis domestica 99.81 0.00e+00 1051.00
IUUC-Mlu-068100 Myotis lucifugus 99.67 5.00e-174 603.00
IUUC-Nfi-068475 Neosartorya fischeri 95.74 9.00e-168 582.00
IUUC-Nle-069526 Nomascus leucogenys 99.67 5.00e-174 603.00
IUUC-Oan-073470 Ornithorhynchus anatinus 99.74 0.00e+00 751.00
IUUC-Obr-076236 Oryza brachyantha 96.05 0.00e+00 873.00
IUUC-Ogl-077274 Oryza glaberrima 90.53 0.00e+00 674.00
IUUC-Oin-079920 Oryza indica 96.05 0.00e+00 1017.00
IUUC-Ome-081397 Oryza meridionalis 33.99 6.00e-41 161.00
IUUC-Osa-085789 Oryza sativa 96.05 0.00e+00 1018.00
IUUC-Ola-087192 Oryzias latipes 93.04 0.00e+00 1180.00
IUUC-Olu-087888 Ostreococcus lucimarinus 95.80 0.00e+00 728.00
IUUC-Oar-089386 Ovis aries 95.04 0.00e+00 972.00
IUUC-Ptr-091261 Pan troglodytes 99.74 0.00e+00 752.00
IUUC-Pan-092134 Papio anubis 99.78 0.00e+00 902.00
IUUC-Psi-093239 Pelodiscus sinensis 77.63 0.00e+00 648.00
IUUC-Pma-094556 Petromyzon marinus 99.01 0.00e+00 791.00
IUUC-Pno-095087 Phaeosphaeria nodorum 96.05 3.00e-124 437.00
IUUC-Ppa-095548 Physcomitrella patens 94.74 0.00e+00 1002.00
IUUC-Pfo-096371 Poecilia formosa 95.44 1.00e-130 458.00
IUUC-Pab-097884 Pongo abelii 99.84 0.00e+00 1200.00
IUUC-Pop-099396 Populus trichocarpa 96.05 0.00e+00 728.00
IUUC-Pca-100992 Procavia capensis 100.00 0.00e+00 687.00
IUUC-Ppe-102064 Prunus persica 95.84 0.00e+00 874.00
IUUC-Pgr-103301 Puccinia graminis 95.89 0.00e+00 1162.00
IUUC-Rno-105199 Rattus norvegicus 99.46 0.00e+00 1446.00
IUUC-Sce-106142 Saccharomyces cerevisiae 96.05 0.00e+00 726.00
IUUC-Sha-106780 Sarcophilus harrisii 98.69 1.00e-170 592.00
IUUC-Sja-107825 Schizosaccharomyces japonicus 96.05 0.00e+00 726.00
IUUC-Spo-108219 Schizosaccharomyces pombe 95.80 0.00e+00 727.00
IUUC-Ssl-108565 Sclerotinia sclerotiorum 97.04 2.00e-168 584.00
IUUC-Smo-109259 Selaginella moellendorffii 94.74 0.00e+00 1290.00
IUUC-Sit-109965 Setaria italica 96.05 0.00e+00 1017.00
IUUC-Sly-111224 Solanum lycopersicum 96.05 0.00e+00 1018.00
IUUC-Stu-112256 Solanum tuberosum 96.05 0.00e+00 1017.00
IUUC-Sbi-114776 Sorghum bicolor 95.98 0.00e+00 858.00
IUUC-Ssc-115672 Sus scrofa 99.44 0.00e+00 1047.00
IUUC-Tgu-116620 Taeniopygia guttata 95.86 7.00e-155 539.00
IUUC-Tca-120959 Theobroma cacao 95.62 0.00e+00 871.00
IUUC-Tre-122012 Trichoderma reesei 96.05 1.00e-167 582.00
IUUC-Tvi-122369 Trichoderma virens 96.05 1.00e-167 582.00
IUUC-Tae-123654 Triticum aestivum 96.05 0.00e+00 873.00
IUUC-Tur-126025 Triticum urartu 95.87 0.00e+00 1016.00
IUUC-Tme-126952 Tuber melanosporum 96.07 1.00e-167 582.00
IUUC-Ttr-128311 Tursiops truncatus 99.34 0.00e+00 897.00
IUUC-Uma-129417 Ustilago maydis 97.37 0.00e+00 879.00
IUUC-Vvi-130874 Vitis vinifera 86.21 0.00e+00 1183.00
IUUC-Xtr-132052 Xenopus tropicalis 99.23 0.00e+00 1258.00
IUUC-Yli-134420 Yarrowia lipolytica 96.05 0.00e+00 870.00
Created Date 25-Jun-2017

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