iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-064611

Ensembl Protein ID

GSMUA_Achr9P24330_001

UniProt Accession

M0U340; M0U340_MUSAM

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_Achr9G24330_001	GSMUA_Achr9T24330_001	GSMUA_Achr9P24330_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.10e-19	69.8	77	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrll 80
           + vkv ++g+++++++dl++++++++L++a+++ ++        + ++s +a++YeD+dGD++ l++D+++++++s      s++r++
   Q: 77   IYVKVGMDGAPYLRKVDLRVYTGYKELMEALNDmFKcfslggaeGHEESGYAITYEDKDGDWM-LVGDVPWEMFIS------SCKRMR 157
           789******************************733678888878888***************.************......****** PP
   S: 81   iqk 83
           i+k
   Q: 158  IMK 160
           **8 PP

Organism

Musa acuminata

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEDLDNLKAT ELTLGLPGTD APEKPSPAST TGANKRANEE CCLPVAKKQV VGWPPLRSYR 60
MNSIRIRKMD AEDNTGIYVK VGMDGAPYLR KVDLRVYTGY KELMEALNDM FKCFSLGGAE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGGATCTA TCTTGGGGAG ACATGGAAGA TCTCGACAAC CTCAAGGCAA CCGAGTTGAC 60
ACTTGGTCTC CCTGGCACCG ACGCCCCGGA GAAGCCATCG CCGGCCAGCA CCACTGGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

mus:103998844

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afl-008703	Aspergillus flavus	27.54	5.30e-01	30.00
IUUC-Ame-010784	Astyanax mexicanus	25.33	1.20e+00	26.90
IUUC-Cel-018552	Caenorhabditis elegans	62.50	9.40e-02	28.90
IUUC-Gac-041585	Gasterosteus aculeatus	25.64	1.60e+00	26.60
IUUC-Mla-059044	Melampsora laricipopulina	29.73	1.80e-02	34.70
IUUC-Ocu-074512	Oryctolagus cuniculus	23.61	4.00e-01	28.10

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence