iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-054293

Ensembl Protein ID

ENSLAFP00000006334.3

UniProt Accession

G3T069; G3T069_LOXAF

Protein Name

Uncharacterized protein

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000007533.3	ENSLAFT00000007534.3	ENSLAFP00000006334.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.10e-19	69.4	168	205
ULD/UDP/UBQ/UBQ_PIM	1.60e-17	63.6	1	56

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 168  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 205
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 23   veelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           v++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    VKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 56
           899**************************************************997 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

VKALKEKIES EKGKDAFPVA GQKLIYAGKI LNDDTALKEY KIDEKNFVVV MVTKPKAVTT 60
PAPATPQQSN PATTAAVSSS TAAAVAQAPA PAPALAPTST PTSITPASTT ASSEPAPASA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAAAGCAC TGAAGGAGAA GATTGAATCT GAAAAGGGGA AAGATGCCTT TCCGGTAGCA 60
GGCCAGAAAT TAATTTATGC GGGTATGAAT TAAATATTGA AGTTAACATG CTGTTTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	36.55	4.00e-32	132.00
IUUC-Aml-001195	Ailuropoda melanoleuca	94.00	1.00e-87	316.00
IUUC-Atr-003116	Amborella trichopoda	36.40	1.00e-30	127.00
IUUC-Apl-003371	Anas platyrhynchos	75.39	2.00e-115	408.00
IUUC-Aca-004599	Anolis carolinensis	82.70	3.00e-93	335.00
IUUC-Ath-006676	Arabidopsis thaliana	39.36	6.00e-40	158.00
IUUC-Ago-007830	Ashbya gossypii	31.12	3.00e-19	89.40
IUUC-Acl-008212	Aspergillus clavatus	47.01	4.00e-19	89.00
IUUC-Afl-008605	Aspergillus flavus	44.12	2.00e-19	90.50
IUUC-Afu-008877	Aspergillus fumigatus	46.27	1.00e-18	87.40
IUUC-Aor-010032	Aspergillus oryzae	44.12	2.00e-19	89.70
IUUC-Ate-010458	Aspergillus terreus	40.73	7.00e-30	124.00
IUUC-Ame-011107	Astyanax mexicanus	65.43	6.00e-56	211.00
IUUC-Bta-012922	Bos taurus	97.87	3.00e-94	338.00
IUUC-Cja-018772	Callithrix jacchus	94.83	6.00e-128	450.00
IUUC-Cfa-020683	Canis familiaris	81.65	2.00e-116	412.00
IUUC-Cpo-022145	Cavia porcellus	91.73	3.00e-121	428.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	36.87	8.00e-30	124.00
IUUC-Csa-023714	Chlorocebus sabaeus	95.09	3.00e-137	481.00
IUUC-Cho-024814	Choloepus hoffmanni	72.03	1.00e-81	296.00
IUUC-Cin-025741	Ciona intestinalis	41.28	4.00e-36	145.00
IUUC-Dre-028369	Danio rerio	73.66	1.00e-81	296.00
IUUC-Dno-029543	Dasypus novemcinctus	90.18	1.00e-122	432.00
IUUC-Dse-031336	Dothistroma septosporum	47.41	1.00e-17	84.00
IUUC-Ete-032583	Echinops telfairi	84.68	1.00e-66	246.00
IUUC-Eca-034243	Equus caballus	98.30	6.00e-93	333.00
IUUC-Eeu-034721	Erinaceus europaeus	87.26	1.00e-69	256.00
IUUC-Fca-035679	Felis catus	93.54	3.00e-119	421.00
IUUC-Fal-037148	Ficedula albicollis	82.85	8.00e-88	317.00
IUUC-Fox-037960	Fusarium oxysporum	43.28	9.00e-16	77.80
IUUC-Ggr-040116	Gaeumannomyces graminis	46.27	4.00e-16	79.00
IUUC-Gga-040544	Gallus gallus	73.26	3.00e-118	418.00
IUUC-Gma-043835	Glycine max	35.41	8.00e-39	154.00
IUUC-Ggo-045125	Gorilla gorilla	99.20	5.00e-97	347.00
IUUC-Hsa-046519	Homo sapiens	99.20	5.00e-97	347.00
IUUC-Hvu-047832	Hordeum vulgare	37.05	2.00e-32	133.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	92.76	1.00e-115	409.00
IUUC-Kpa-049314	Komagataella pastoris	37.66	1.00e-29	123.00
IUUC-Lch-050553	Latimeria chalumnae	66.15	6.00e-96	343.00
IUUC-Lpe-050801	Leersia perrieri	36.82	4.00e-34	138.00
IUUC-Loc-051748	Lepisosteus oculatus	75.32	7.00e-75	274.00
IUUC-Mcc-055600	Macaca mulatta	97.74	2.00e-103	368.00
IUUC-Meu-056082	Macropus eugenii	65.82	2.00e-68	252.00
IUUC-Mor-057287	Magnaporthe oryzae	46.77	9.00e-15	74.30
IUUC-Mpo-057609	Magnaporthe poae	46.51	2.00e-15	76.30
IUUC-Mtr-058148	Medicago truncatula	38.22	2.00e-40	160.00
IUUC-Mla-058961	Melampsora laricipopulina	46.62	3.00e-26	112.00
IUUC-Mga-060060	Meleagris gallopavo	48.37	2.00e-15	76.30
IUUC-Mvi-060220	Microbotryum violaceum	43.61	2.00e-21	97.40
IUUC-Mmr-061159	Microcebus murinus	97.06	3.00e-95	342.00
IUUC-Mdo-061967	Monodelphis domestica	83.08	2.00e-107	382.00
IUUC-Mmu-063258	Mus musculus	87.59	1.00e-129	456.00
IUUC-Mpu-066389	Mustela putorius furo	94.40	5.00e-88	317.00
IUUC-Mlu-067999	Myotis lucifugus	90.49	4.00e-117	414.00
IUUC-Nfi-068390	Neosartorya fischeri	46.27	8.00e-19	87.80
IUUC-Ncr-068685	Neurospora crassa	44.78	3.00e-24	105.00
IUUC-Nle-069655	Nomascus leucogenys	95.35	6.00e-132	463.00
IUUC-Opr-070234	Ochotona princeps	87.04	4.00e-28	118.00
IUUC-Ont-072484	Oreochromis niloticus	55.17	3.00e-91	328.00
IUUC-Oan-073258	Ornithorhynchus anatinus	90.66	5.00e-51	193.00
IUUC-Ocu-074831	Oryctolagus cuniculus	81.70	4.00e-118	417.00
IUUC-Obr-076909	Oryza brachyantha	37.85	2.00e-37	149.00
IUUC-Ola-086540	Oryzias latipes	61.94	9.00e-64	237.00
IUUC-Olu-087843	Ostreococcus lucimarinus	42.79	1.00e-38	153.00
IUUC-Oga-088023	Otolemur garnettii	87.72	1.00e-122	432.00
IUUC-Oar-089964	Ovis aries	93.54	2.00e-115	408.00
IUUC-Ptr-091165	Pan troglodytes	99.20	8.00e-97	347.00
IUUC-Pan-092009	Papio anubis	94.87	4.00e-131	461.00
IUUC-Psi-093477	Pelodiscus sinensis	85.24	2.00e-83	302.00
IUUC-Ppa-095964	Physcomitrella patens	43.61	1.00e-27	117.00
IUUC-Pfo-097385	Poecilia formosa	64.71	3.00e-70	258.00
IUUC-Pab-097868	Pongo abelii	99.20	3.00e-96	345.00
IUUC-Pop-099416	Populus trichocarpa	34.94	5.00e-39	154.00
IUUC-Pca-100652	Procavia capensis	96.50	9.00e-70	256.00
IUUC-Pva-102137	Pteropus vampyrus	98.31	8.00e-95	340.00
IUUC-Ptt-103717	Puccinia triticina	45.93	1.00e-25	110.00
IUUC-Pte-104303	Pyrenophora teres	50.00	6.00e-20	91.70
IUUC-Pyt-104580	Pyrenophora triticirepentis	49.64	9.00e-20	90.90
IUUC-Rno-104844	Rattus norvegicus	88.58	5.00e-132	464.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.77	4.00e-13	68.90
IUUC-Sha-107073	Sarcophilus harrisii	89.83	6.00e-87	314.00
IUUC-Spo-108298	Schizosaccharomyces pombe	42.04	6.00e-38	151.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.75	6.00e-17	81.60
IUUC-Sar-112925	Sorex araneus	88.01	6.00e-86	310.00
IUUC-Sre-114894	Sporisorium reilianum	50.82	1.00e-10	61.20
IUUC-Ssc-116329	Sus scrofa	95.35	8.00e-122	430.00
IUUC-Tgu-116918	Taeniopygia guttata	75.06	5.00e-114	404.00
IUUC-Tru-118651	Takifugu rubripes	62.76	3.00e-72	265.00
IUUC-Tsy-118836	Tarsius syrichta	99.26	9.00e-49	187.00
IUUC-Tre-121911	Trichoderma reesei	46.51	2.00e-16	79.70
IUUC-Tvi-122617	Trichoderma virens	46.51	1.00e-16	80.10
IUUC-Tae-125620	Triticum aestivum	34.84	6.00e-36	144.00
IUUC-Tur-126610	Triticum urartu	36.55	9.00e-33	134.00
IUUC-Tbe-127493	Tupaia belangeri	82.59	3.00e-70	259.00
IUUC-Ttr-128464	Tursiops truncatus	96.99	1.00e-98	353.00
IUUC-Uma-129484	Ustilago maydis	47.54	1.00e-11	64.30
IUUC-Vda-129946	Verticillium dahliae	47.01	1.00e-17	84.00
IUUC-Vpa-130357	Vicugna pacos	90.57	1.00e-86	313.00
IUUC-Vvi-130842	Vitis vinifera	35.57	1.00e-37	150.00
IUUC-Xtr-132679	Xenopus tropicalis	83.40	8.00e-68	250.00
IUUC-Yli-134615	Yarrowia lipolytica	42.13	1.00e-36	147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence