iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129674

Ensembl Protein ID

EGY17647

UniProt Accession

G2WU56; G2WU56_VERDV

Genbank Protein ID

EGY17647.1

Protein Name

U4/U6.U5 tri-snRNP-associated protein

Genbank Nucleotide ID

DS572696

Gene Name

VDAG_01329

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_01329	EGY17647	EGY17647

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.30e-27	95.1	210	526

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsgyeqqDaqEflaf 98
           +G++Nl    Y+N +LQ+Ls++ +lr+++l    e+++         el+k    l++++w     k +vsp+ell++++  +++ f+ ++q D  Efl++
   Q: 210  VGMNNLKENDYLNVILQALSHVVPLRNYFLL---EDFSS------RSELAKRTSILVRKIWnpRAFKAHVSPHELLQQIALDSNKrFTLTNQSDPIEFLSW 301
           69*****************************...66654......468*************9888999***********9876666*************** PP
   S: 99   lldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlk.............sqikclecdnvssreepfldlslpvpgkeetkkes 186
           +l++l+  l                         +k+k ++s+i+++Fqg+lk             ++++ ++ + v +  + fl l+l++p     + e+
   Q: 302  FLNNLHLGL-----------------------GGSKTKPGSSMIHRIFQGKLKvesqaitaradagDRLRFEDAADVHVAVSRFLLLTLDLPAAPLFQDEN 379
           *********.......................568999******************************************************999999999 PP
   S: 187  lqdcLesftkeeelegenkyycekckkkqe.aekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldlspfctspeekqke..kkkYeLiav 283
            ++++ +   +  l +   y  ++ +++    ++   l+ lP++L++h kRf  s+++ ++e++ + v+f  + Ld++p+++ +  +     +  Y+L+a 
   Q: 380  NRNIIPQVPLTTILAK---YDGRHAQEHLAqRKRYRLLHPLPPYLVMHVKRF--SQNKFVSERNPTIVTFDARnLDMAPYVEPNPAEHPPgePIWYDLVAN 475
           9*************95...777666665550455567899************..88899************999*******99554443255999****** PP
   S: 284  vvHsG.slssGHYvayvkn.............ekgk..WllfdDskVtevkeee 321
           vvH+   ++    va++                  +  W+ + D  V +v+ e 
   Q: 476  VVHEAvRARRED-VADAVGeerktwkvqlkdkG--RdeWVVCQDLFVDKVQSEL 526
           ****96666655.44443335555555554222..2558888888888887654 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MEQARRKRQA LDALDEVAGV DSPRSKRSRT GDATMSEGSP PPHGLNGDAT DKAEANGGKS 60
VEEEDEDDDF EDETPAAPIR QSAPTSGYDD LYLDTIDRNV LDFDFEKLCS ISLSNINVYA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAACAGG CTCGCCGCAA GCGACAGGCG CTCGATGCCC TCGATGAGGT TGCAGGAGTC 60
GACTCGCCAA GGTCGAAGAG GTCGAGGACT GGCGACGCGA CAATGTCGGA GGGGTCACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0000245--P:spliceosomal complex assembly

KEGG

vda:VDAG_01329

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000483	Aegilops tauschii	44.40	3.00e-102	363.00
IUUC-Aml-001846	Ailuropoda melanoleuca	45.49	3.00e-112	396.00
IUUC-Atr-002758	Amborella trichopoda	45.45	2.00e-111	394.00
IUUC-Apl-003336	Anas platyrhynchos	44.29	1.00e-54	205.00
IUUC-Aca-004846	Anolis carolinensis	44.81	4.00e-108	383.00
IUUC-Aly-005683	Arabidopsis lyrata	43.57	2.00e-97	347.00
IUUC-Ath-007661	Arabidopsis thaliana	43.74	8.00e-99	352.00
IUUC-Ago-007802	Ashbya gossypii	35.53	5.00e-73	266.00
IUUC-Acl-008304	Aspergillus clavatus	55.74	1.00e-161	561.00
IUUC-Afl-008735	Aspergillus flavus	74.05	7.00e-59	219.00
IUUC-Afu-009100	Aspergillus fumigatus	60.50	5.00e-157	545.00
IUUC-Ani-009138	Aspergillus nidulans	54.35	7.00e-163	565.00
IUUC-Ang-009661	Aspergillus niger	63.37	3.00e-159	553.00
IUUC-Aor-010235	Aspergillus oryzae	57.03	7.00e-146	508.00
IUUC-Ate-010346	Aspergillus terreus	54.34	5.00e-133	466.00
IUUC-Ame-011688	Astyanax mexicanus	45.17	3.00e-113	400.00
IUUC-Bgr-011998	Blumeria graminis	69.03	0.00e+00	734.00
IUUC-Bta-013407	Bos taurus	45.49	3.00e-112	396.00
IUUC-Bci-013977	Botrytis cinerea	76.91	0.00e+00	724.00
IUUC-Bdi-014361	Brachypodium distachyon	43.72	1.00e-107	381.00
IUUC-Bol-016317	Brassica oleracea	43.83	2.00e-96	344.00
IUUC-Bra-017190	Brassica rapa	43.83	1.00e-96	345.00
IUUC-Cel-018491	Caenorhabditis elegans	42.98	3.00e-106	377.00
IUUC-Cja-019134	Callithrix jacchus	45.49	2.00e-112	397.00
IUUC-Cfa-020098	Canis familiaris	45.49	2.00e-112	397.00
IUUC-Cpo-021595	Cavia porcellus	45.49	6.00e-112	396.00
IUUC-Csa-024121	Chlorocebus sabaeus	45.49	4.00e-112	396.00
IUUC-Cho-025057	Choloepus hoffmanni	44.33	1.00e-42	165.00
IUUC-Cin-025473	Ciona intestinalis	37.08	6.00e-27	112.00
IUUC-Csv-025815	Ciona savignyi	54.17	3.00e-76	277.00
IUUC-Cgl-026416	Colletotrichum gloeosporioides	79.57	0.00e+00	818.00
IUUC-Cne-026802	Cryptococcus neoformans	46.00	4.00e-117	413.00
IUUC-Dre-027870	Danio rerio	45.34	3.00e-113	400.00
IUUC-Dno-029655	Dasypus novemcinctus	45.49	3.00e-112	397.00
IUUC-Dor-030762	Dipodomys ordii	45.49	4.00e-112	396.00
IUUC-Dse-031441	Dothistroma septosporum	65.61	0.00e+00	658.00
IUUC-Dme-032101	Drosophila melanogaster	43.27	3.00e-111	393.00
IUUC-Ete-032841	Echinops telfairi	42.27	2.00e-102	363.00
IUUC-Eca-033463	Equus caballus	45.49	4.00e-112	396.00
IUUC-Eeu-034438	Erinaceus europaeus	52.38	1.00e-60	225.00
IUUC-Fca-035774	Felis catus	45.49	3.00e-112	397.00
IUUC-Fal-036988	Ficedula albicollis	44.63	2.00e-114	404.00
IUUC-Fox-037895	Fusarium oxysporum	77.16	0.00e+00	833.00
IUUC-Fso-038450	Fusarium solani	76.98	0.00e+00	815.00
IUUC-Gmo-038874	Gadus morhua	44.13	5.00e-109	386.00
IUUC-Ggr-040115	Gaeumannomyces graminis	68.18	0.00e+00	769.00
IUUC-Gac-041650	Gasterosteus aculeatus	44.68	1.00e-110	391.00
IUUC-Gma-043697	Glycine max	45.65	4.00e-106	376.00
IUUC-Ggo-044707	Gorilla gorilla	42.55	2.00e-96	344.00
IUUC-Hsa-046041	Homo sapiens	45.49	4.00e-112	396.00
IUUC-Hvu-047816	Hordeum vulgare	42.27	5.00e-98	350.00
IUUC-Itr-048945	Ictidomys tridecemlineatus	51.72	4.00e-90	322.00
IUUC-Lch-050419	Latimeria chalumnae	45.49	3.00e-116	410.00
IUUC-Lpe-051593	Leersia perrieri	46.32	1.00e-109	388.00
IUUC-Loc-052930	Lepisosteus oculatus	45.09	1.00e-112	398.00
IUUC-Lma-053256	Leptosphaeria maculans	64.31	0.00e+00	688.00
IUUC-Laf-053555	Loxodonta africana	45.28	4.00e-111	393.00
IUUC-Mcc-055630	Macaca mulatta	45.49	4.00e-112	396.00
IUUC-Meu-056579	Macropus eugenii	38.37	1.00e-54	205.00
IUUC-Mor-057078	Magnaporthe oryzae	70.97	0.00e+00	755.00
IUUC-Mpo-057607	Magnaporthe poae	59.48	0.00e+00	666.00
IUUC-Mtr-058644	Medicago truncatula	43.76	6.00e-104	369.00
IUUC-Mla-059120	Melampsora laricipopulina	43.98	3.00e-119	420.00
IUUC-Mvi-060429	Microbotryum violaceum	55.63	4.00e-90	323.00
IUUC-Mmr-061313	Microcebus murinus	45.49	4.00e-112	396.00
IUUC-Mdo-062801	Monodelphis domestica	45.28	7.00e-112	395.00
IUUC-Mmu-064424	Mus musculus	45.49	3.00e-116	410.00
IUUC-Mac-065115	Musa acuminata	45.18	2.00e-106	377.00
IUUC-Mpu-065980	Mustela putorius furo	41.82	6.00e-90	322.00
IUUC-Mlu-067007	Myotis lucifugus	45.49	2.00e-112	397.00
IUUC-Nfi-068274	Neosartorya fischeri	55.14	5.00e-160	555.00
IUUC-Ncr-068829	Neurospora crassa	74.91	0.00e+00	781.00
IUUC-Nle-069171	Nomascus leucogenys	45.49	5.00e-112	396.00
IUUC-Opr-070494	Ochotona princeps	40.98	5.00e-87	313.00
IUUC-Ont-072290	Oreochromis niloticus	44.94	1.00e-114	404.00
IUUC-Oan-073099	Ornithorhynchus anatinus	45.71	4.00e-112	396.00
IUUC-Ocu-074642	Oryctolagus cuniculus	45.49	4.00e-112	396.00
IUUC-Oba-075886	Oryza barthii	45.67	1.00e-108	384.00
IUUC-Obr-076220	Oryza brachyantha	45.22	4.00e-108	383.00
IUUC-Ogl-077682	Oryza glaberrima	45.67	9.00e-109	385.00
IUUC-Ogu-078492	Oryza glumaepatula	45.45	1.00e-108	385.00
IUUC-Oin-079956	Oryza indica	45.87	1.00e-108	385.00
IUUC-Olo-080239	Oryza longistaminata	41.44	2.00e-87	316.00
IUUC-Ome-081573	Oryza meridionalis	45.45	6.00e-108	382.00
IUUC-Oni-082975	Oryza nivara	45.87	1.00e-108	385.00
IUUC-Opu-083724	Oryza punctata	45.45	2.00e-108	384.00
IUUC-Oru-084566	Oryza rufipogon	45.67	1.00e-108	385.00
IUUC-Osa-086008	Oryza sativa	45.67	9.00e-109	385.00
IUUC-Ola-086967	Oryzias latipes	44.11	7.00e-113	399.00
IUUC-Olu-087614	Ostreococcus lucimarinus	38.29	8.00e-77	278.00
IUUC-Oga-088047	Otolemur garnettii	43.24	9.00e-77	278.00
IUUC-Oar-089393	Ovis aries	45.49	3.00e-112	397.00
IUUC-Ptr-090561	Pan troglodytes	45.49	4.00e-112	396.00
IUUC-Pan-091812	Papio anubis	45.49	4.00e-112	396.00
IUUC-Psi-093507	Pelodiscus sinensis	40.00	9.00e-55	204.00
IUUC-Pno-095104	Phaeosphaeria nodorum	63.26	0.00e+00	696.00
IUUC-Ppa-095995	Physcomitrella patens	46.38	4.00e-112	396.00
IUUC-Pfo-096754	Poecilia formosa	44.56	4.00e-114	403.00
IUUC-Pab-098053	Pongo abelii	45.49	4.00e-112	396.00
IUUC-Pop-099230	Populus trichocarpa	44.78	1.00e-106	378.00
IUUC-Pca-100407	Procavia capensis	40.98	2.00e-86	311.00
IUUC-Ppe-101699	Prunus persica	44.28	9.00e-103	365.00
IUUC-Pva-103159	Pteropus vampyrus	44.42	3.00e-104	370.00
IUUC-Pgr-103433	Puccinia graminis	45.25	6.00e-122	429.00
IUUC-Ptt-103701	Puccinia triticina	41.67	3.00e-105	373.00
IUUC-Pte-104281	Pyrenophora teres	64.81	0.00e+00	687.00
IUUC-Pyt-104714	Pyrenophora triticirepentis	64.81	0.00e+00	689.00
IUUC-Rno-105531	Rattus norvegicus	45.28	1.00e-115	408.00
IUUC-Sce-106368	Saccharomyces cerevisiae	32.31	6.00e-65	239.00
IUUC-Sha-107093	Sarcophilus harrisii	45.28	2.00e-111	394.00
IUUC-Sja-108004	Schizosaccharomyces japonicus	52.84	2.00e-145	506.00
IUUC-Spo-108018	Schizosaccharomyces pombe	49.67	1.00e-138	484.00
IUUC-Ssl-108460	Sclerotinia sclerotiorum	74.10	0.00e+00	703.00
IUUC-Smo-108892	Selaginella moellendorffii	46.05	5.00e-107	379.00
IUUC-Sit-110782	Setaria italica	45.82	7.00e-111	392.00
IUUC-Sly-111308	Solanum lycopersicum	46.03	2.00e-116	410.00
IUUC-Stu-112447	Solanum tuberosum	46.65	1.00e-117	415.00
IUUC-Sar-113352	Sorex araneus	44.96	1.00e-82	298.00
IUUC-Sbi-114806	Sorghum bicolor	46.78	7.00e-110	389.00
IUUC-Sre-115059	Sporisorium reilianum	42.86	6.00e-103	366.00
IUUC-Ssc-115677	Sus scrofa	51.10	2.00e-89	321.00
IUUC-Tru-118478	Takifugu rubripes	44.33	5.00e-113	399.00
IUUC-Tsy-119082	Tarsius syrichta	40.87	8.00e-73	265.00
IUUC-Tni-120419	Tetraodon nigroviridis	44.19	2.00e-106	377.00
IUUC-Tca-121294	Theobroma cacao	44.89	1.00e-114	405.00
IUUC-Tre-121962	Trichoderma reesei	78.41	0.00e+00	801.00
IUUC-Tvi-122280	Trichoderma virens	77.63	0.00e+00	820.00
IUUC-Tae-124442	Triticum aestivum	44.06	1.00e-106	378.00
IUUC-Tur-126551	Triticum urartu	44.71	8.00e-106	375.00
IUUC-Tme-126959	Tuber melanosporum	64.88	0.00e+00	650.00
IUUC-Tbe-127737	Tupaia belangeri	44.88	2.00e-108	384.00
IUUC-Ttr-129211	Tursiops truncatus	57.14	5.00e-77	280.00
IUUC-Uma-129591	Ustilago maydis	41.81	1.00e-107	381.00
IUUC-Vpa-130793	Vicugna pacos	41.92	7.00e-97	346.00
IUUC-Xtr-132430	Xenopus tropicalis	43.28	7.00e-108	382.00
IUUC-Xma-133515	Xiphophorus maculatus	44.35	2.00e-113	400.00
IUUC-Yli-134488	Yarrowia lipolytica	46.81	5.00e-106	375.00
IUUC-Zma-134748	Zea mays	46.35	2.00e-109	387.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence