iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095496

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544926

Gene Name

PHYPADRAFT_22356

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S37_119V6	PP1S37_119V6.1	PP1S37_119V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-30	103.2	262	294
UBD/Beta-Prp	4.60e-50	171.2	225	464

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH + vt+laf ++   l s+s D t+k+W++ 
   Q: 262  GHRGAVTGLAFrQGtQQLMSSSLDRTVKLWSVE 294
           8**********966589*************985 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgd 107
           i ++++s d+++la+g+ d+ i +wd+++ + ++ + gh ++vt + f + ++ l+++s Drt+k+w++++++++ tl gh+++v +++  + ++
   Q: 225  ILSLAVSSDGRYLASGGLDRAIHLWDIRSRQHIQAFNGHRGAVTGLAFRQGTQQLMSSSLDRTVKLWSVEDRSYIDTLYGHQSDVIAIDCLR-QE 318
           5568889************************************************************************************9.99 PP
   S: 108  klvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv.yslsfdsng...kelv.. 196
           +++s ++drt+r+w++++++ l  +++gh++   + ++   +  + sGs+D++v lW+   +k ++   g+h +   y+ls++ ++    +l+  
   Q: 319  RILSVGRDRTLRLWKIPEESQL--VFRGHNAHLESCCFIT-NGEFLSGSDDGCVALWSTLKKKPVYIAHGAHGSTEkYHLSLHTDQsssLDLAng 410
           **********************..5*****9999999988.56689*************999999999887765432677766666556455511 PP
   S: 197  sgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgd 255
            g  +g v+  +++tg+     +g +++v  v++++ +++ +sg+ Dgsi++W l+  +
   Q: 411  NGNGNGHVEEHSVSTGT-----RGAESWVGAVAVCRASDLAASGAGDGSIQLWALKDTN 464
           56678899999999996.....9******************************766544 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MANVRKRTQP NARKDRGKKR KVKEVGEKRD GGSVRKPRRD EEISSEEEEE RIGNEGEAFF 60
SEEEEEEVDL ETADEKRLRI AKAYLDRTRQ AAADAEDDED DETADQRMGA RDSMVADLLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCTGATCTC CATGGCCGAC CTGCGCTTTC ACCTCGCTCG TTCGATGCGA TTGTGCGCCT 60
TGCAAGCATA ATTTCCTCCC CGGGCGATGG TTTGATTGTG CGCTTCCTTC AGATGTTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0006364--P:rRNA processing

KEGG

ppp:PHYPADRAFT_22356

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007710	Ashbya gossypii	27.69	9.00e-42	164.00
IUUC-Afl-008718	Aspergillus flavus	29.77	5.00e-42	165.00
IUUC-Afu-008966	Aspergillus fumigatus	31.27	3.00e-45	176.00
IUUC-Ani-009214	Aspergillus nidulans	30.39	3.00e-47	182.00
IUUC-Aor-009956	Aspergillus oryzae	29.77	5.00e-42	165.00
IUUC-Bci-013973	Botrytis cinerea	32.94	5.00e-53	201.00
IUUC-Cel-018616	Caenorhabditis elegans	31.30	2.00e-52	199.00
IUUC-Cin-025670	Ciona intestinalis	36.77	1.00e-76	279.00
IUUC-Cne-027070	Cryptococcus neoformans	27.43	8.00e-37	147.00
IUUC-Fox-038036	Fusarium oxysporum	32.68	7.00e-59	220.00
IUUC-Fso-038298	Fusarium solani	32.53	1.00e-57	216.00
IUUC-Mvi-060371	Microbotryum violaceum	29.52	3.00e-56	212.00
IUUC-Olu-087891	Ostreococcus lucimarinus	40.45	4.00e-84	304.00
IUUC-Pno-095008	Phaeosphaeria nodorum	27.95	2.00e-41	163.00
IUUC-Pte-104243	Pyrenophora teres	27.08	1.00e-37	150.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	27.41	2.00e-38	153.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	31.08	5.00e-54	204.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	28.76	6.00e-56	211.00
IUUC-Sar-113315	Sorex araneus	36.36	3.00e-20	92.40
IUUC-Tca-121724	Theobroma cacao	51.56	9.00e-123	432.00
IUUC-Tme-126985	Tuber melanosporum	32.79	5.00e-56	211.00
IUUC-Uma-129472	Ustilago maydis	29.62	9.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence