iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Osa-086055

UUCD1 version

UUC-OrS-01271

Ensembl Protein ID

OS04T0686000-01

UniProt Accession

Q7XTM1; Q7XTM1_ORYSJ

Genbank Protein ID

BAF16238.1; BAG98399.1; BAS91734.1; CAD41926.1; EAZ32482.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

AP008210; AK108418; AP014960; AL606686; CM000141

Gene Name

Os04g0686000; Os04g0686000; OsJ_16699; OSJNBa0070M12.4; OSNPB_040686000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OS04G0686000	OS04T0686000-01	OS04T0686000-01

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/U-box	U-box	24486490

Classification

Family	E-value	Score	Start	End
E3 activity/RING/U-box	9.80e-32	109.8	12	84

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawceens 73
           evp++f+CpIsl++MrdPv+lp+Gitydr  Ie+wl + g+ cP+t+qp+  + d +Pn+tlrrliq+wc+ ++
   Q: 12   EVPSYFVCPISLQIMRDPVTLPTGITYDRDGIERWLLTAGT-CPLTKQPVpPDCDPTPNHTLRRLIQSWCALHA 84
           69**************************************9.********777788**************9876 PP

Organism

Oryza sativa

Protein Sequence
(Fasta)

MEEQQQVEVE VEVPSYFVCP ISLQIMRDPV TLPTGITYDR DGIERWLLTA GTCPLTKQPV 60
PPDCDPTPNH TLRRLIQSWC ALHADHGVDL VPTPKPPADR ARVADLVSRL RAATSSAALL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTACTCCCC ATCTCCCATC CACCATTGCT GCCATCTCCA CCACATACAA TACAACAACT 60
ACTACTCAGC TCACCATCAC CGGAGCAAGA GCCAAGAAGA CGACGACGAC GACGAGCTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

osa:4337468

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afl-008721	Aspergillus flavus	38.33	2.00e-09	55.50
IUUC-Aor-010014	Aspergillus oryzae	38.33	2.00e-09	54.70
IUUC-Gma-043606	Glycine max	46.27	7.00e-91	326.00
IUUC-Lpe-050796	Leersia perrieri	72.59	2.00e-120	424.00
IUUC-Mac-065098	Musa acuminata	48.13	7.00e-99	352.00
IUUC-Oba-075095	Oryza barthii	98.03	4.00e-177	612.00
IUUC-Obr-076623	Oryza brachyantha	87.55	9.00e-111	391.00
IUUC-Ogl-077664	Oryza glaberrima	99.50	0.00e+00	639.00
IUUC-Ogu-078137	Oryza glumaepatula	99.75	5.00e-179	619.00
IUUC-Oin-079766	Oryza indica	99.61	3.00e-119	420.00
IUUC-Ome-081839	Oryza meridionalis	98.25	0.00e+00	680.00
IUUC-Oni-082645	Oryza nivara	99.75	5.00e-179	619.00
IUUC-Opu-084067	Oryza punctata	92.75	0.00e+00	661.00
IUUC-Oru-084231	Oryza rufipogon	100.00	1.00e-179	620.00
IUUC-Pop-099765	Populus trichocarpa	46.96	2.00e-108	384.00
IUUC-Ppe-102059	Prunus persica	46.52	2.00e-106	378.00
IUUC-Sja-107957	Schizosaccharomyces japonicus	27.78	5.50e-02	33.50
IUUC-Sit-110571	Setaria italica	76.05	8.00e-153	532.00
IUUC-Sbi-114629	Sorghum bicolor	74.09	2.00e-124	437.00
IUUC-Tca-121107	Theobroma cacao	48.18	6.00e-105	373.00
IUUC-Tae-122829	Triticum aestivum	60.24	2.00e-82	298.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence