iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131474

Ensembl Protein ID

VIT_09s0002g01390.t01

UniProt Accession

F6HXX7; F6HXX7_VITVI

Genbank Protein ID

CCB59300.1

Protein Name

Ubiquitin-like protein ATG12

Genbank Nucleotide ID

FN596494

Gene Name

VIT_09s0002g01390

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_09s0002g01390	VIT_09s0002g01390.t01	VIT_09s0002g01390.t01

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UBL/ATG12	34.57	1.00e-08	56.20	IUUC-Hsa-046903

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Vitis vinifera

Functional Description
(View)

Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.

Protein Sequence
(Fasta)

MASESPSSAR KVVVHLRATG DAPILKQAKF KIPGTDKFAK VIEFLRRQLH RDTLFVYVNS 60
AFSPNPDELV IDLYNNFTGF IMAWIFQGYK TKRRGNALKF PKQLCNPGLA FNGKESATLV 120

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Nucleotide Sequence
(Fasta)

AATTTAGAAA ACCGGCACAA GCTTATCCCC GTCCCGGCCG GCGGCTGCGA GGTCTCCCCA 60
TCTCTCCTAA ACTTCTCCCG GTCTTCGGCC GGAGCTATAT GAGGCAGAAA CTCATCCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR007242--Atg12
IPR029071--Ubiquitin-rel_dom

Pfam

PF04110--APG12

Gene Ontology

GO:0034274--C:Atg12-Atg5-Atg16 complex
GO:0034045--C:pre-autophagosomal structure membrane
GO:0019776--F:Atg8 ligase activity
GO:0000045--P:autophagosome assembly
GO:0006501--P:C-terminal protein lipidation
GO:0000422--P:mitophagy
GO:0044804--P:nucleophagy

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001177	Aegilops tauschii	72.97	8.00e-30	120.00
IUUC-Aml-002116	Ailuropoda melanoleuca	35.80	6.00e-10	55.80
IUUC-Atr-002615	Amborella trichopoda	87.50	7.00e-37	143.00
IUUC-Apl-003753	Anas platyrhynchos	52.17	3.00e-03	32.00
IUUC-Aca-005231	Anolis carolinensis	35.00	5.00e-07	45.80
IUUC-Aly-006172	Arabidopsis lyrata	85.71	6.00e-35	137.00
IUUC-Ath-006953	Arabidopsis thaliana	80.00	2.00e-34	135.00
IUUC-Ago-007970	Ashbya gossypii	31.34	1.20e-01	28.50
IUUC-Acl-008072	Aspergillus clavatus	44.29	4.00e-10	55.50
IUUC-Afl-008725	Aspergillus flavus	44.29	3.00e-10	57.00
IUUC-Afu-008967	Aspergillus fumigatus	44.29	1.00e-09	55.10
IUUC-Ani-009248	Aspergillus nidulans	42.86	2.00e-09	53.90
IUUC-Ang-009684	Aspergillus niger	43.48	2.00e-09	54.30
IUUC-Aor-009947	Aspergillus oryzae	44.29	3.00e-10	57.00
IUUC-Ame-011656	Astyanax mexicanus	35.21	6.00e-08	48.50
IUUC-Bgr-012174	Blumeria graminis	41.25	4.00e-12	62.80
IUUC-Bta-012483	Bos taurus	34.57	3.00e-10	56.20
IUUC-Bci-013755	Botrytis cinerea	36.36	4.00e-09	52.40
IUUC-Bdi-014156	Brachypodium distachyon	77.22	4.00e-32	127.00
IUUC-Bol-015683	Brassica oleracea	75.82	5.00e-35	137.00
IUUC-Bra-016802	Brassica rapa	85.92	4.00e-32	127.00
IUUC-Cel-018242	Caenorhabditis elegans	41.67	4.00e-08	49.30
IUUC-Cja-019514	Callithrix jacchus	35.00	5.00e-10	56.20
IUUC-Cfa-020748	Canis familiaris	35.80	4.00e-10	56.20
IUUC-Cpo-021965	Cavia porcellus	35.80	5.00e-10	56.60
IUUC-Cre-023009	Chlamydomonas reinhardtii	41.10	3.00e-12	62.00
IUUC-Csa-023494	Chlorocebus sabaeus	34.57	2.00e-10	57.00
IUUC-Cho-024631	Choloepus hoffmanni	34.57	1.00e-09	55.50
IUUC-Cin-025609	Ciona intestinalis	45.71	1.00e-11	60.50
IUUC-Cgl-026722	Colletotrichum gloeosporioides	42.50	4.00e-11	59.70
IUUC-Dre-027479	Danio rerio	35.90	3.00e-09	52.80
IUUC-Dno-029693	Dasypus novemcinctus	30.14	1.00e-05	41.20
IUUC-Dse-031440	Dothistroma septosporum	38.57	7.00e-09	52.00
IUUC-Dme-031892	Drosophila melanogaster	29.49	1.00e-07	47.40
IUUC-Ete-032550	Echinops telfairi	34.18	6.00e-09	52.00
IUUC-Eca-033553	Equus caballus	34.57	3.00e-10	56.60
IUUC-Fca-036524	Felis catus	35.00	9.00e-10	55.50
IUUC-Fal-036942	Ficedula albicollis	36.23	3.00e-09	52.00
IUUC-Fox-037753	Fusarium oxysporum	41.25	8.00e-12	62.00
IUUC-Gmo-039498	Gadus morhua	38.03	2.00e-08	50.40
IUUC-Ggr-039852	Gaeumannomyces graminis	39.44	1.00e-08	52.00
IUUC-Gga-041263	Gallus gallus	34.57	1.00e-09	55.10
IUUC-Gac-042346	Gasterosteus aculeatus	40.30	1.00e-08	50.80
IUUC-Gma-042896	Glycine max	88.75	2.00e-37	145.00
IUUC-Ggo-045601	Gorilla gorilla	34.57	6.00e-10	56.20
IUUC-Hsa-046903	Homo sapiens	34.57	2.00e-10	57.00
IUUC-Hvu-047239	Hordeum vulgare	78.87	2.00e-30	122.00
IUUC-Itr-048445	Ictidomys tridecemlineatus	35.80	2.00e-10	57.40
IUUC-Kpa-049355	Komagataella pastoris	27.50	2.00e-05	40.80
IUUC-Lch-050619	Latimeria chalumnae	36.62	2.00e-10	57.00
IUUC-Loc-052102	Lepisosteus oculatus	45.83	1.10e-02	30.00
IUUC-Lma-053299	Leptosphaeria maculans	37.31	2.00e-07	46.60
IUUC-Laf-054205	Loxodonta africana	35.80	2.00e-10	57.40
IUUC-Meu-056804	Macropus eugenii	35.80	4.00e-10	56.20
IUUC-Mor-057052	Magnaporthe oryzae	35.44	2.00e-08	50.80
IUUC-Mtr-057961	Medicago truncatula	88.61	2.00e-37	145.00
IUUC-Mla-059045	Melampsora laricipopulina	47.89	2.00e-15	72.80
IUUC-Mvi-060360	Microbotryum violaceum	51.43	7.00e-16	75.10
IUUC-Mmr-061654	Microcebus murinus	35.62	3.00e-10	56.20
IUUC-Mdo-062649	Monodelphis domestica	36.25	2.00e-10	57.40
IUUC-Mmu-064105	Mus musculus	34.57	4.00e-10	56.20
IUUC-Mac-065532	Musa acuminata	88.75	2.00e-38	149.00
IUUC-Mpu-066269	Mustela putorius furo	35.80	3.00e-10	56.60
IUUC-Mlu-067631	Myotis lucifugus	34.57	1.00e-09	55.10
IUUC-Nfi-068468	Neosartorya fischeri	44.29	4.00e-10	55.50
IUUC-Ncr-068750	Neurospora crassa	38.03	6.00e-10	55.80
IUUC-Nle-069483	Nomascus leucogenys	34.57	6.00e-10	56.20
IUUC-Opr-070936	Ochotona princeps	36.25	6.00e-10	56.20
IUUC-Obr-076322	Oryza brachyantha	69.86	6.00e-29	117.00
IUUC-Ogl-077226	Oryza glaberrima	74.60	2.00e-26	108.00
IUUC-Oin-079220	Oryza indica	74.47	2.00e-18	82.80
IUUC-Olo-080688	Oryza longistaminata	74.60	2.00e-26	108.00
IUUC-Ome-081265	Oryza meridionalis	74.60	2.00e-26	108.00
IUUC-Oru-084342	Oryza rufipogon	75.00	4.00e-28	117.00
IUUC-Osa-086212	Oryza sativa	74.60	2.00e-26	108.00
IUUC-Ola-087277	Oryzias latipes	34.62	1.00e-08	50.80
IUUC-Olu-087780	Ostreococcus lucimarinus	37.68	4.00e-10	55.10
IUUC-Oga-088175	Otolemur garnettii	34.57	2.00e-10	57.00
IUUC-Oar-089477	Ovis aries	34.57	1.00e-09	55.50
IUUC-Ptr-091129	Pan troglodytes	34.57	6.00e-10	56.20
IUUC-Psi-093351	Pelodiscus sinensis	34.62	4.00e-10	56.20
IUUC-Pno-094948	Phaeosphaeria nodorum	31.11	7.00e-08	48.50
IUUC-Ppa-095788	Physcomitrella patens	71.79	9.00e-29	117.00
IUUC-Pfo-096993	Poecilia formosa	32.50	3.00e-08	49.70
IUUC-Pab-098502	Pongo abelii	34.57	6.00e-10	56.20
IUUC-Pop-098819	Populus trichocarpa	76.62	1.00e-32	129.00
IUUC-Pca-100144	Procavia capensis	29.17	1.40e-02	31.60
IUUC-Ppe-101560	Prunus persica	98.46	1.00e-33	133.00
IUUC-Pva-102810	Pteropus vampyrus	36.23	7.00e-09	52.40
IUUC-Pgr-103531	Puccinia graminis	50.68	5.00e-16	75.10
IUUC-Ptt-103753	Puccinia triticina	50.70	2.00e-15	73.60
IUUC-Pyt-104733	Pyrenophora triticirepentis	40.58	1.00e-09	54.70
IUUC-Rno-106072	Rattus norvegicus	37.04	8.00e-11	58.50
IUUC-Sce-106275	Saccharomyces cerevisiae	32.35	3.00e-07	47.40
IUUC-Sha-107554	Sarcophilus harrisii	35.80	3.00e-10	56.60
IUUC-Sja-107682	Schizosaccharomyces japonicus	40.00	2.00e-10	57.00
IUUC-Spo-108275	Schizosaccharomyces pombe	40.85	2.00e-12	63.50
IUUC-Smo-109151	Selaginella moellendorffii	53.62	9.00e-17	77.00
IUUC-Sit-110270	Setaria italica	80.52	2.00e-32	129.00
IUUC-Sly-111862	Solanum lycopersicum	85.00	2.00e-34	135.00
IUUC-Stu-112663	Solanum tuberosum	50.00	2.00e-10	57.00
IUUC-Sbi-114148	Sorghum bicolor	80.52	2.00e-32	129.00
IUUC-Sre-115216	Sporisorium reilianum	43.06	5.00e-13	65.50
IUUC-Ssc-116051	Sus scrofa	34.57	3.00e-10	56.60
IUUC-Tgu-117008	Taeniopygia guttata	31.58	9.00e-03	30.80
IUUC-Tru-118466	Takifugu rubripes	38.46	1.00e-08	49.70
IUUC-Tsy-119334	Tarsius syrichta	33.33	1.00e-05	42.00
IUUC-Tni-119792	Tetraodon nigroviridis	38.46	1.00e-08	50.10
IUUC-Tca-121861	Theobroma cacao	93.75	5.00e-40	154.00
IUUC-Tvi-122499	Trichoderma virens	47.14	1.00e-12	64.30
IUUC-Tae-123431	Triticum aestivum	72.97	8.00e-30	120.00
IUUC-Tme-126934	Tuber melanosporum	38.57	2.00e-09	53.90
IUUC-Ttr-129001	Tursiops truncatus	31.25	1.00e-05	42.40
IUUC-Uma-129324	Ustilago maydis	44.44	2.00e-13	67.00
IUUC-Vda-129846	Verticillium dahliae	42.86	5.00e-11	59.30
IUUC-Vpa-130202	Vicugna pacos	52.17	1.10e-02	32.00
IUUC-Xtr-132782	Xenopus tropicalis	38.27	9.00e-11	58.20
IUUC-Xma-134140	Xiphophorus maculatus	33.33	5.00e-08	48.90
IUUC-Yli-134517	Yarrowia lipolytica	41.27	3.00e-07	47.80
IUUC-Zma-134764	Zea mays	80.52	1.00e-32	129.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence