iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015574

Ensembl Protein ID

Bo3g149870.1

UniProt Accession

A0A0D3BJD1; A0A0D3BJD1_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g149870	Bo3g149870.1	Bo3g149870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.00e-08	34.8	142	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C  C+ +++ ++ +v+Ce+C+ewfHp C + ++e  ++ ++ ++C++C+
   Q: 142  FC-KCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEAAKKLDH-FYCEECS 189
           78.7999**************************888888887.******7 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MPKQKAQKKQ LKSYKLKHIN RTIQEGDAVL MRSSEPGKPS YVARVEAIEA TDARGSNARV 60
RVRWYYRPEE SMGGRRQFHG AKEVFLSDHF DLQSADTIEG KCKVHSFSSY TKLSSVGNDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCAAGC AAAAAGCTCA AAAGAAGCAA CTCAAATCCT ACAAACTCAA ACACATCAAC 60
AGAACGATTC AAGGTAACCT CCCTTCTTCT TCTTCTTTTT GAATTTTTTT ATTTTATTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0035067--P:negative regulation of histone acetylation
GO:0009791--P:post-embryonic development
GO:2000028--P:regulation of photoperiodism, flowering
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004346	Anolis carolinensis	36.05	8.00e-11	62.80
IUUC-Aly-005443	Arabidopsis lyrata	89.08	5.00e-117	412.00
IUUC-Ath-006906	Arabidopsis thaliana	87.34	9.00e-115	405.00
IUUC-Ago-007912	Ashbya gossypii	43.33	3.30e-02	32.70
IUUC-Bra-017900	Brassica rapa	97.82	2.00e-128	451.00
IUUC-Cel-018283	Caenorhabditis elegans	28.57	3.00e-09	58.90
IUUC-Cne-026894	Cryptococcus neoformans	44.62	6.00e-10	58.90
IUUC-Gma-043965	Glycine max	72.77	1.00e-90	325.00
IUUC-Hvu-047723	Hordeum vulgare	60.39	1.00e-75	275.00
IUUC-Lpe-051138	Leersia perrieri	66.67	1.00e-83	301.00
IUUC-Mtr-058621	Medicago truncatula	71.57	3.00e-88	317.00
IUUC-Oba-075855	Oryza barthii	68.84	2.00e-84	304.00
IUUC-Obr-076353	Oryza brachyantha	70.59	5.00e-82	298.00
IUUC-Ogl-077547	Oryza glaberrima	71.05	4.00e-83	300.00
IUUC-Oin-079179	Oryza indica	68.47	2.00e-85	308.00
IUUC-Olo-080461	Oryza longistaminata	70.16	5.00e-83	300.00
IUUC-Ome-081714	Oryza meridionalis	69.15	1.00e-85	308.00
IUUC-Oni-082099	Oryza nivara	69.15	1.00e-85	308.00
IUUC-Osa-085620	Oryza sativa	68.47	2.00e-85	308.00
IUUC-Olu-087802	Ostreococcus lucimarinus	44.64	4.00e-42	163.00
IUUC-Pop-099324	Populus trichocarpa	71.29	1.00e-86	311.00
IUUC-Pca-100779	Procavia capensis	34.48	7.00e-11	63.20
IUUC-Sce-106421	Saccharomyces cerevisiae	34.67	3.00e-06	45.40
IUUC-Sja-107734	Schizosaccharomyces japonicus	40.43	1.00e-06	49.30
IUUC-Tca-121689	Theobroma cacao	73.74	2.00e-88	317.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence