iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111679

Ensembl Protein ID

Solyc08g067040.2.1

UniProt Accession

K4CLT0; K4CLT0_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc08g067040.2	Solyc08g067040.2.1	Solyc08g067040.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-36	122.0	268	302
UBD/Beta-Prp	2.50e-69	234.5	179	383

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           H++s++ l+f  +d  ++s+sdD t+k+WD+ ++ 
   Q: 268  HKESIRELSFcsTDLKFCSCSDDTTVKIWDFARCQ 302
           99*********655889*************87665 PP

UBD/Beta-Prp

   S: 46   rslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsgh 136
            sl ++   ++++ + p+g  lvtgs+ +   +w+ +++   ++l++h++ v+s+ +s +++++v+G++  ti+ w+ + + +    ++ h
   Q: 179  TSLNKNRCSINCLAWTPSGRRLVTGSQSGEFTLWNGQSFNFEMILQAHDQAVRSMVWSHNDNWMVTGDDGGTIKYWQNNMNNVKA-HKNAH 268
           467888999*******************************************************************999999998.***** PP
   S: 137  dgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks 227
           +++++ +++ +++  + s+s+D+tv++Wd ++ +  r l+g h  +v+s+++++++  lvsg++d+ vklwd ++g+ + +++gh+++v++
   Q: 269  KESIRELSFCSTDLKFCSCSDDTTVKIWDFARCQEERSLSG-HGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKSGKELSSFHGHKNTVLC 358
           ***************************************99.************************************************* PP
   S: 228  vrfspnderlvsgssDgsiriWdlr 252
           v+  +n+++++++s+D+ i+++d+r
   Q: 359  VKWNQNGNWVLTASKDQIIKLYDIR 383
           **********************986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MASGDPHQHQ QHQHPPLPQQ QFQQQHQQQP QQQPQQQHQQ QPQQQHQQQH QQLHQQQHPP 60
HFGEFPRGPQ PLPGPPPMMR QPSASSTTLN SQLPGPPPHP SYDAHADSFA AKRMRKIGQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAGTG GTGATCCTCA TCAGCATCAG CAGCACCAGC ACCCACCGCT GCCACAGCAA 60
CAATTCCAGC AACAACACCA GCAACAACCC CAGCAACAGC CGCAGCAACA ACATCAGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0006379--P:mRNA cleavage

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001064	Aegilops tauschii	73.50	0.00e+00	687.00
IUUC-Aml-001363	Ailuropoda melanoleuca	57.82	3.00e-136	479.00
IUUC-Atr-003030	Amborella trichopoda	78.20	0.00e+00	727.00
IUUC-Apl-003409	Anas platyrhynchos	57.52	1.00e-134	474.00
IUUC-Aca-004694	Anolis carolinensis	57.56	1.00e-135	477.00
IUUC-Aly-006063	Arabidopsis lyrata	75.99	0.00e+00	716.00
IUUC-Ath-006583	Arabidopsis thaliana	71.69	0.00e+00	713.00
IUUC-Ago-007805	Ashbya gossypii	44.69	2.00e-89	321.00
IUUC-Acl-008075	Aspergillus clavatus	39.85	5.00e-94	337.00
IUUC-Afl-008582	Aspergillus flavus	40.91	3.00e-91	328.00
IUUC-Afu-008817	Aspergillus fumigatus	38.50	5.00e-81	294.00
IUUC-Ani-009391	Aspergillus nidulans	38.40	2.00e-83	302.00
IUUC-Ang-009750	Aspergillus niger	43.00	4.00e-76	277.00
IUUC-Aor-010085	Aspergillus oryzae	39.30	2.00e-93	336.00
IUUC-Ate-010397	Aspergillus terreus	40.10	3.00e-93	335.00
IUUC-Ame-010741	Astyanax mexicanus	56.35	1.00e-83	304.00
IUUC-Bgr-012169	Blumeria graminis	47.27	7.00e-102	363.00
IUUC-Bta-013265	Bos taurus	57.82	2.00e-136	479.00
IUUC-Bci-013762	Botrytis cinerea	44.78	3.00e-103	368.00
IUUC-Bdi-014849	Brachypodium distachyon	76.73	0.00e+00	724.00
IUUC-Bol-015325	Brassica oleracea	73.87	0.00e+00	728.00
IUUC-Bra-017064	Brassica rapa	76.11	0.00e+00	724.00
IUUC-Cel-018378	Caenorhabditis elegans	45.00	1.00e-114	407.00
IUUC-Cja-019547	Callithrix jacchus	57.82	1.00e-136	480.00
IUUC-Cfa-020031	Canis familiaris	57.82	2.00e-136	479.00
IUUC-Cpo-021554	Cavia porcellus	57.97	4.00e-132	465.00
IUUC-Cre-022830	Chlamydomonas reinhardtii	41.69	8.00e-76	276.00
IUUC-Csa-023146	Chlorocebus sabaeus	57.56	4.00e-136	479.00
IUUC-Cho-024679	Choloepus hoffmanni	53.32	3.00e-122	432.00
IUUC-Cin-025415	Ciona intestinalis	51.07	7.00e-125	440.00
IUUC-Csv-026003	Ciona savignyi	53.21	2.00e-120	424.00
IUUC-Cgl-026391	Colletotrichum gloeosporioides	44.35	2.00e-97	348.00
IUUC-Cne-026983	Cryptococcus neoformans	44.88	5.00e-98	351.00
IUUC-Cme-027147	Cyanidioschyzon merolae	50.52	7.00e-116	409.00
IUUC-Dre-028545	Danio rerio	57.82	1.00e-135	477.00
IUUC-Dno-029677	Dasypus novemcinctus	57.82	1.00e-136	480.00
IUUC-Dse-031371	Dothistroma septosporum	43.77	1.00e-95	343.00
IUUC-Dme-031663	Drosophila melanogaster	54.67	2.00e-137	482.00
IUUC-Ete-032511	Echinops telfairi	51.19	8.00e-115	408.00
IUUC-Eca-034152	Equus caballus	57.82	3.00e-136	479.00
IUUC-Eeu-034560	Erinaceus europaeus	44.50	1.00e-47	184.00
IUUC-Fca-035820	Felis catus	57.82	3.00e-136	479.00
IUUC-Fox-037958	Fusarium oxysporum	42.54	2.00e-98	352.00
IUUC-Fso-038162	Fusarium solani	44.32	2.00e-97	349.00
IUUC-Gmo-039708	Gadus morhua	57.52	8.00e-135	474.00
IUUC-Ggr-040031	Gaeumannomyces graminis	40.60	4.00e-91	328.00
IUUC-Gga-040963	Gallus gallus	57.82	3.00e-136	479.00
IUUC-Gac-041541	Gasterosteus aculeatus	57.11	8.00e-132	464.00
IUUC-Gma-043757	Glycine max	84.49	0.00e+00	803.00
IUUC-Ggo-045564	Gorilla gorilla	57.82	2.00e-136	479.00
IUUC-Hsa-045833	Homo sapiens	57.82	1.00e-136	480.00
IUUC-Hvu-047848	Hordeum vulgare	76.36	2.00e-151	528.00
IUUC-Itr-048083	Ictidomys tridecemlineatus	57.82	2.00e-136	479.00
IUUC-Kpa-049308	Komagataella pastoris	40.78	2.00e-88	318.00
IUUC-Lch-050525	Latimeria chalumnae	57.82	6.00e-136	478.00
IUUC-Lpe-051364	Leersia perrieri	73.33	0.00e+00	689.00
IUUC-Loc-052696	Lepisosteus oculatus	57.82	1.00e-137	483.00
IUUC-Lma-052951	Leptosphaeria maculans	45.19	1.00e-99	356.00
IUUC-Laf-053653	Loxodonta africana	57.82	3.00e-136	479.00
IUUC-Mcc-055797	Macaca mulatta	57.82	2.00e-136	479.00
IUUC-Meu-056331	Macropus eugenii	54.66	7.00e-105	375.00
IUUC-Mor-057168	Magnaporthe oryzae	40.97	1.00e-93	336.00
IUUC-Mpo-057510	Magnaporthe poae	43.35	8.00e-65	239.00
IUUC-Mtr-058032	Medicago truncatula	80.72	0.00e+00	771.00
IUUC-Mla-058852	Melampsora laricipopulina	50.13	6.00e-111	393.00
IUUC-Mga-059311	Meleagris gallopavo	57.82	3.00e-136	479.00
IUUC-Mvi-060544	Microbotryum violaceum	50.00	4.00e-114	404.00
IUUC-Mmr-061143	Microcebus murinus	57.82	2.00e-136	479.00
IUUC-Mdo-061977	Monodelphis domestica	57.82	3.00e-136	479.00
IUUC-Mmu-063922	Mus musculus	57.82	2.00e-136	479.00
IUUC-Mac-064961	Musa acuminata	79.87	0.00e+00	791.00
IUUC-Mpu-066079	Mustela putorius furo	61.25	4.00e-120	425.00
IUUC-Mlu-067247	Myotis lucifugus	57.82	3.00e-136	479.00
IUUC-Nfi-068255	Neosartorya fischeri	40.82	1.00e-88	319.00
IUUC-Ncr-068909	Neurospora crassa	43.39	9.00e-102	363.00
IUUC-Nle-068994	Nomascus leucogenys	57.82	1.00e-136	480.00
IUUC-Opr-071079	Ochotona princeps	57.82	1.00e-136	481.00
IUUC-Ont-071971	Oreochromis niloticus	57.56	7.00e-135	474.00
IUUC-Oan-073135	Ornithorhynchus anatinus	58.88	4.00e-122	432.00
IUUC-Ocu-073982	Oryctolagus cuniculus	57.82	6.00e-136	478.00
IUUC-Oba-075297	Oryza barthii	73.33	0.00e+00	703.00
IUUC-Obr-076641	Oryza brachyantha	78.39	0.00e+00	733.00
IUUC-Ogl-077539	Oryza glaberrima	77.64	7.00e-160	556.00
IUUC-Ogu-078807	Oryza glumaepatula	73.33	0.00e+00	703.00
IUUC-Oin-079229	Oryza indica	78.00	0.00e+00	758.00
IUUC-Olo-080371	Oryza longistaminata	73.74	0.00e+00	686.00
IUUC-Ome-081149	Oryza meridionalis	73.33	0.00e+00	700.00
IUUC-Oni-082970	Oryza nivara	73.56	0.00e+00	704.00
IUUC-Opu-083415	Oryza punctata	72.02	0.00e+00	693.00
IUUC-Oru-085236	Oryza rufipogon	73.56	0.00e+00	704.00
IUUC-Ola-087421	Oryzias latipes	57.82	4.00e-135	474.00
IUUC-Olu-087821	Ostreococcus lucimarinus	55.22	2.00e-121	428.00
IUUC-Oga-088132	Otolemur garnettii	57.82	2.00e-136	479.00
IUUC-Oar-089513	Ovis aries	57.82	2.00e-136	479.00
IUUC-Ptr-090717	Pan troglodytes	57.82	1.00e-136	480.00
IUUC-Pan-092108	Papio anubis	57.82	2.00e-136	479.00
IUUC-Psi-093892	Pelodiscus sinensis	57.82	6.00e-136	478.00
IUUC-Pma-094561	Petromyzon marinus	59.15	2.00e-138	486.00
IUUC-Pno-094943	Phaeosphaeria nodorum	41.55	2.00e-100	358.00
IUUC-Ppa-095359	Physcomitrella patens	71.33	0.00e+00	644.00
IUUC-Pfo-096516	Poecilia formosa	57.41	6.00e-134	471.00
IUUC-Pab-097759	Pongo abelii	57.82	1.00e-136	480.00
IUUC-Pop-099553	Populus trichocarpa	80.67	0.00e+00	791.00
IUUC-Ppe-101957	Prunus persica	84.32	0.00e+00	771.00
IUUC-Pva-102918	Pteropus vampyrus	57.82	5.00e-136	478.00
IUUC-Pgr-103594	Puccinia graminis	50.67	2.00e-113	402.00
IUUC-Ptt-103879	Puccinia triticina	46.38	4.00e-97	348.00
IUUC-Pte-104419	Pyrenophora teres	43.20	6.00e-101	360.00
IUUC-Pyt-104718	Pyrenophora triticirepentis	44.86	2.00e-98	352.00
IUUC-Rno-105838	Rattus norvegicus	57.82	1.00e-136	480.00
IUUC-Sce-106331	Saccharomyces cerevisiae	40.29	3.00e-84	304.00
IUUC-Sha-107435	Sarcophilus harrisii	57.52	1.00e-134	474.00
IUUC-Sja-107796	Schizosaccharomyces japonicus	40.40	4.00e-98	350.00
IUUC-Spo-108163	Schizosaccharomyces pombe	43.03	8.00e-102	363.00
IUUC-Smo-109602	Selaginella moellendorffii	70.38	0.00e+00	647.00
IUUC-Sit-109729	Setaria italica	74.58	0.00e+00	724.00
IUUC-Sar-113157	Sorex araneus	57.82	8.00e-136	478.00
IUUC-Sbi-114853	Sorghum bicolor	77.95	0.00e+00	746.00
IUUC-Sre-115085	Sporisorium reilianum	43.58	2.00e-95	342.00
IUUC-Ssc-116286	Sus scrofa	57.67	6.00e-135	474.00
IUUC-Tgu-117219	Taeniopygia guttata	57.82	3.00e-136	479.00
IUUC-Tru-117550	Takifugu rubripes	57.82	2.00e-134	472.00
IUUC-Tsy-119294	Tarsius syrichta	57.82	1.00e-136	480.00
IUUC-Tni-120561	Tetraodon nigroviridis	52.73	2.00e-136	479.00
IUUC-Tca-121347	Theobroma cacao	83.97	0.00e+00	840.00
IUUC-Tre-122018	Trichoderma reesei	42.36	4.00e-101	361.00
IUUC-Tvi-122413	Trichoderma virens	42.36	1.00e-99	356.00
IUUC-Tae-123904	Triticum aestivum	76.17	0.00e+00	726.00
IUUC-Tme-127077	Tuber melanosporum	49.21	5.00e-107	380.00
IUUC-Tbe-127744	Tupaia belangeri	39.66	5.00e-71	262.00
IUUC-Ttr-128777	Tursiops truncatus	50.66	2.00e-108	387.00
IUUC-Uma-129568	Ustilago maydis	42.82	2.00e-93	336.00
IUUC-Vda-129834	Verticillium dahliae	40.75	1.00e-92	333.00
IUUC-Vpa-130563	Vicugna pacos	58.24	1.00e-29	124.00
IUUC-Vvi-131360	Vitis vinifera	85.04	0.00e+00	842.00
IUUC-Xtr-132630	Xenopus tropicalis	57.56	2.00e-138	486.00
IUUC-Xma-133665	Xiphophorus maculatus	57.82	2.00e-135	476.00
IUUC-Yli-134556	Yarrowia lipolytica	41.29	8.00e-83	300.00
IUUC-Zma-135787	Zea mays	78.22	0.00e+00	753.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence