iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026730

Ensembl Protein ID

ELA27209

UniProt Accession

L2FLC3; L2FLC3_COLGN

Genbank Protein ID

ELA27209.1

Protein Name

DNA repair protein rad16

Genbank Nucleotide ID

KB020999

Gene Name

CGGC5_11928

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_11928	ELA27209	ELA27209

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	52.73	0.00e+00	730.00	IUUC-Sce-106159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MTGRRGRGRP SLAESLASTR TNSPNLASTT GRLTRSASSK NLPGPQAPEV DTSTPTSAPR 60
GRGRPRKSVA ATAESVSSAP SAAASADFTS ASEDSTPATS NVATPAPSVA AGGGLRQTTR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCGGCC GTCGTGGTCG TGGTCGTCCT TCTCTTGCTG AGAGCTTGGC TTCCACCCGA 60
ACCAGTGAGT ACCCCGATCT GAGTCTCTTA TTGTTTCTAT CGCAACTCCA TCTTCCATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017956--AT_hook_DNA-bd_motif
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N
PF00097--zf-C3HC4

SMART

SM00384--AT_hook
SM00487--DEXDc
SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000449	Aegilops tauschii	39.92	3.00e-105	374.00
IUUC-Atr-002602	Amborella trichopoda	41.32	2.00e-105	375.00
IUUC-Aly-005572	Arabidopsis lyrata	41.43	1.00e-112	399.00
IUUC-Ath-007571	Arabidopsis thaliana	42.24	2.00e-115	408.00
IUUC-Ago-007980	Ashbya gossypii	51.64	0.00e+00	699.00
IUUC-Acl-008061	Aspergillus clavatus	67.81	0.00e+00	952.00
IUUC-Afl-008389	Aspergillus flavus	68.27	0.00e+00	959.00
IUUC-Afu-008775	Aspergillus fumigatus	66.87	0.00e+00	927.00
IUUC-Ani-009475	Aspergillus nidulans	67.88	8.00e-157	545.00
IUUC-Ang-009813	Aspergillus niger	67.19	0.00e+00	950.00
IUUC-Aor-009994	Aspergillus oryzae	68.27	0.00e+00	954.00
IUUC-Ate-010405	Aspergillus terreus	69.52	0.00e+00	977.00
IUUC-Bgr-012279	Blumeria graminis	74.18	0.00e+00	1020.00
IUUC-Bci-013844	Botrytis cinerea	79.06	0.00e+00	1063.00
IUUC-Bdi-015009	Brachypodium distachyon	39.92	4.00e-105	374.00
IUUC-Bol-016388	Brassica oleracea	37.65	8.00e-122	430.00
IUUC-Bra-017729	Brassica rapa	36.62	4.00e-122	430.00
IUUC-Cne-026934	Cryptococcus neoformans	47.77	4.00e-169	587.00
IUUC-Dse-031540	Dothistroma septosporum	69.01	0.00e+00	951.00
IUUC-Fox-037709	Fusarium oxysporum	81.50	0.00e+00	1130.00
IUUC-Fso-038218	Fusarium solani	82.16	0.00e+00	1181.00
IUUC-Ggr-040094	Gaeumannomyces graminis	74.49	0.00e+00	1039.00
IUUC-Gma-042935	Glycine max	40.77	2.00e-114	405.00
IUUC-Hvu-047660	Hordeum vulgare	40.32	4.00e-106	376.00
IUUC-Kpa-049222	Komagataella pastoris	50.78	0.00e+00	687.00
IUUC-Lpe-050970	Leersia perrieri	37.91	2.00e-92	331.00
IUUC-Lma-053125	Leptosphaeria maculans	68.11	0.00e+00	963.00
IUUC-Meu-056270	Macropus eugenii	29.89	3.00e-58	218.00
IUUC-Mor-056942	Magnaporthe oryzae	74.33	0.00e+00	1048.00
IUUC-Mpo-057611	Magnaporthe poae	75.59	0.00e+00	1043.00
IUUC-Mtr-058123	Medicago truncatula	35.53	2.00e-119	422.00
IUUC-Mla-059170	Melampsora laricipopulina	45.80	2.00e-175	607.00
IUUC-Mvi-060400	Microbotryum violaceum	47.85	0.00e+00	661.00
IUUC-Mdo-062919	Monodelphis domestica	30.70	1.00e-61	229.00
IUUC-Nfi-068347	Neosartorya fischeri	68.58	0.00e+00	967.00
IUUC-Ncr-068941	Neurospora crassa	81.22	0.00e+00	1149.00
IUUC-Obr-076549	Oryza brachyantha	40.98	1.00e-107	381.00
IUUC-Ogl-077889	Oryza glaberrima	40.70	2.00e-106	377.00
IUUC-Ogu-078593	Oryza glumaepatula	38.89	4.00e-100	357.00
IUUC-Oin-080110	Oryza indica	36.93	4.00e-82	297.00
IUUC-Olo-080282	Oryza longistaminata	37.65	3.00e-94	337.00
IUUC-Ome-081180	Oryza meridionalis	37.00	5.00e-94	337.00
IUUC-Oni-082941	Oryza nivara	39.09	4.00e-100	357.00
IUUC-Opu-083720	Oryza punctata	37.20	5.00e-89	320.00
IUUC-Oru-085272	Oryza rufipogon	37.24	1.00e-90	325.00
IUUC-Osa-085537	Oryza sativa	40.90	1.00e-106	378.00
IUUC-Olu-087669	Ostreococcus lucimarinus	39.05	1.00e-107	383.00
IUUC-Pno-094792	Phaeosphaeria nodorum	67.65	0.00e+00	958.00
IUUC-Pop-099503	Populus trichocarpa	42.42	6.00e-114	403.00
IUUC-Ppe-102071	Prunus persica	40.28	1.00e-112	399.00
IUUC-Pgr-103403	Puccinia graminis	47.36	0.00e+00	625.00
IUUC-Ptt-103966	Puccinia triticina	46.25	2.00e-174	604.00
IUUC-Pte-104264	Pyrenophora teres	68.12	0.00e+00	961.00
IUUC-Pyt-104815	Pyrenophora triticirepentis	68.12	0.00e+00	962.00
IUUC-Sce-106159	Saccharomyces cerevisiae	52.73	0.00e+00	731.00
IUUC-Sja-107959	Schizosaccharomyces japonicus	51.55	0.00e+00	694.00
IUUC-Spo-108338	Schizosaccharomyces pombe	50.31	0.00e+00	675.00
IUUC-Ssl-108523	Sclerotinia sclerotiorum	78.87	0.00e+00	1065.00
IUUC-Smo-109139	Selaginella moellendorffii	39.63	1.00e-124	438.00
IUUC-Sit-110565	Setaria italica	40.65	2.00e-106	378.00
IUUC-Sly-111735	Solanum lycopersicum	36.28	1.00e-121	429.00
IUUC-Stu-112856	Solanum tuberosum	38.93	1.00e-108	385.00
IUUC-Sbi-114800	Sorghum bicolor	40.52	9.00e-106	376.00
IUUC-Sre-114938	Sporisorium reilianum	49.39	0.00e+00	650.00
IUUC-Tca-121230	Theobroma cacao	40.94	1.00e-111	395.00
IUUC-Tre-122065	Trichoderma reesei	83.88	0.00e+00	1168.00
IUUC-Tvi-122398	Trichoderma virens	83.41	0.00e+00	1172.00
IUUC-Tae-125864	Triticum aestivum	40.12	3.00e-106	377.00
IUUC-Tur-126489	Triticum urartu	35.52	2.00e-82	298.00
IUUC-Uma-129441	Ustilago maydis	49.08	0.00e+00	645.00
IUUC-Vda-129735	Verticillium dahliae	76.83	0.00e+00	1069.00
IUUC-Vvi-131253	Vitis vinifera	42.16	1.00e-112	399.00
IUUC-Yli-134350	Yarrowia lipolytica	52.19	0.00e+00	702.00
IUUC-Zma-135113	Zea mays	40.12	5.00e-103	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence