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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Dme-031719
Ensembl Protein ID FBpp0074766
UniProt Accession O16102; Q8SYJ8; Q9VVZ3; CHD3_DROME
Genbank Protein ID AAF49162.2; AAL49125.1; AAB87384.1
Protein Name Chromodomain-helicase-DNA-binding protein 3; ATP-dependent helicase Chd3
Genbank Nucleotide ID AE014296; AY071503; AF007780
Gene Name Chd3; CG9594
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
FBgn0023395 FBtr0074998 FBpp0074766
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IIDPINA
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 8.70e-10 38.7 36 79
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkC 51
           ++C+vC +gg+    l++C+ C +++H +Cl+++  ++ p+ + wiCp+C
   Q: 36   EYCKVCSDGGD----LLCCDSCPSVYHRTCLSPP-LKSIPKGD-WICPRC 79
           79*********....*******************.*******7.****** PP
   
Organism Drosophila melanogaster
Functional Description
(View)

Functional Description


     Possible transcription activator.
 Possible transcription activator.
Protein Sequence
(Fasta)
MSSKRGADPD WKTPGKASKD KRPKTNAKKQ KFRDEEYCKV CSDGGDLLCC DSCPSVYHRT 60
CLSPPLKSIP KGDWICPRCI PLPGKAEKIL SWRWALDRSV ELRTSKGEKR REYFIKWHGM 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Dme-031719|E3,PHD|Drosophila melanogaster
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTACCGTTTT CTTCTGGCGC GCATTTGACA ATTTCCATTT CAGAATCAGT GATTGCAAAA 60
ACTAAACTCA AATAGCATGT CGTCTAAGAG AGGGGCTGAT CCAGACTGGA AAACACCTGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Dme-031719|E3,PHD|Drosophila melanogaster
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0010--Activator
KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0347--Helicase
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF00385--Chromo
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N
SMART

SM00298--CHROMO
SM00487--DEXDc
SM00490--HELICc
SM00249--PHD
Gene Ontology

GO:0005634--C:nucleus
GO:0035327--C:transcriptionally active chromatin
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0004386--F:helicase activity
GO:0031491--F:nucleosome binding
GO:0070615--F:nucleosome-dependent ATPase activity
GO:0008270--F:zinc ion binding
GO:0006333--P:chromatin assembly or disassembly
GO:0042766--P:nucleosome mobilization
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated
KEGG dme:Dmel_CG9594
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000518 Aegilops tauschii 33.40 3.00e-70 259.00
IUUC-Ago-007719 Ashbya gossypii 31.40 1.00e-73 271.00
IUUC-Bci-013603 Botrytis cinerea 32.12 8.00e-67 248.00
IUUC-Cre-022710 Chlamydomonas reinhardtii 29.81 4.00e-54 206.00
IUUC-Cgl-026654 Colletotrichum gloeosporioides 30.68 5.00e-63 235.00
IUUC-Cme-027109 Cyanidioschyzon merolae 36.49 4.00e-78 285.00
IUUC-Dse-031225 Dothistroma septosporum 32.16 6.00e-72 265.00
IUUC-Fox-037667 Fusarium oxysporum 33.33 4.00e-62 232.00
IUUC-Kpa-049261 Komagataella pastoris 32.60 3.00e-70 259.00
IUUC-Mor-057145 Magnaporthe oryzae 32.20 8.00e-68 251.00
IUUC-Mpo-057493 Magnaporthe poae 33.14 6.00e-70 258.00
IUUC-Mtr-057734 Medicago truncatula 32.44 8.00e-69 255.00
IUUC-Mac-064440 Musa acuminata 32.61 3.00e-68 253.00
IUUC-Ncr-068920 Neurospora crassa 31.27 6.00e-67 248.00
IUUC-Ppa-095213 Physcomitrella patens 45.00 0.00e+00 633.00
IUUC-Pte-104217 Pyrenophora teres 30.22 4.00e-63 236.00
IUUC-Ssl-108500 Sclerotinia sclerotiorum 31.63 1.00e-68 254.00
IUUC-Tre-121868 Trichoderma reesei 31.12 1.00e-62 234.00
IUUC-Tvi-122455 Trichoderma virens 31.47 2.00e-60 227.00
IUUC-Tae-123249 Triticum aestivum 33.27 6.00e-71 262.00
IUUC-Tur-126107 Triticum urartu 33.40 3.00e-70 259.00
IUUC-Vda-129884 Verticillium dahliae 33.21 2.00e-71 263.00
Created Date 25-Jun-2017

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