iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014160

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100832041; BRADI_3g52160

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G52160	BRADI3G52160.1	BRADI3G52160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	32.7	164	206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f+dg  +++lp C H+fh+ C+  w       + + +CPlCr
   Q: 164  CSVCLGEFRDGesLRLLPkCSHAFHLPCIDPW------LKSHSSCPLCR 206
           ********7766699999**************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAAMVNPPPA ALVPQPTWVP YEPTRDCSQG LCSMYCPQWC YFIFPPPPPA FDIAGPSGDD 60
DSSGPAFSPL VIAIIGVLAS AFLLVSYYTI ISKYCGTFSS LWTRLFGPGS GSGAGGGHGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCAA TGGTCAACCC TCCTCCAGCA GCTCTGGTGC CGCAGCCAAC GTGGGTGCCC 60
TACGAGCCAA CGAGGGATTG CTCGCAGGGC CTGTGCAGCA TGTACTGCCC GCAGTGGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100832041

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002971	Amborella trichopoda	56.12	2.00e-56	212.00
IUUC-Ath-006705	Arabidopsis thaliana	55.44	1.00e-46	179.00
IUUC-Bol-015911	Brassica oleracea	51.10	1.00e-38	152.00
IUUC-Bra-017128	Brassica rapa	51.46	9.00e-48	182.00
IUUC-Gma-042838	Glycine max	45.57	2.00e-59	221.00
IUUC-Hvu-047701	Hordeum vulgare	70.75	5.00e-116	410.00
IUUC-Lpe-051459	Leersia perrieri	65.05	1.00e-114	405.00
IUUC-Mtr-058411	Medicago truncatula	56.46	2.00e-57	215.00
IUUC-Oba-075056	Oryza barthii	63.82	1.00e-103	369.00
IUUC-Obr-076483	Oryza brachyantha	59.63	6.00e-99	353.00
IUUC-Ogl-077644	Oryza glaberrima	64.09	3.00e-105	374.00
IUUC-Ogu-078989	Oryza glumaepatula	63.32	3.00e-103	367.00
IUUC-Oin-079716	Oryza indica	63.82	1.00e-103	369.00
IUUC-Olo-081066	Oryza longistaminata	64.91	6.00e-103	366.00
IUUC-Ome-081279	Oryza meridionalis	64.58	4.00e-99	354.00
IUUC-Oni-082896	Oryza nivara	63.82	1.00e-103	369.00
IUUC-Opu-083796	Oryza punctata	64.75	9.00e-99	352.00
IUUC-Oru-084594	Oryza rufipogon	63.57	3.00e-103	367.00
IUUC-Osa-086004	Oryza sativa	63.84	8.00e-105	372.00
IUUC-Ppa-095182	Physcomitrella patens	48.67	7.00e-28	117.00
IUUC-Ppe-101720	Prunus persica	56.06	2.00e-58	218.00
IUUC-Smo-108989	Selaginella moellendorffii	46.53	7.00e-24	102.00
IUUC-Sit-109894	Setaria italica	67.96	8.00e-107	379.00
IUUC-Sly-111110	Solanum lycopersicum	57.22	2.00e-50	191.00
IUUC-Sbi-114789	Sorghum bicolor	65.40	1.00e-113	402.00
IUUC-Tca-120979	Theobroma cacao	43.30	1.00e-63	236.00
IUUC-Tae-124557	Triticum aestivum	71.09	7.00e-116	409.00
IUUC-Vvi-130829	Vitis vinifera	39.88	1.00e-45	176.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence