iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014859

Ensembl Protein ID

BRADI4G02600.1

UniProt Accession

I1IGR8; I1IGR8_BRADI

Genbank Protein ID

KQJ85961.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000883

Gene Name

LOC100833839; BRADI_4g02600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G02600	BRADI4G02600.1	BRADI4G02600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.20e-17	64.4	134	230

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt......................elknsevalkYeDedGDlvtlksDedldkavsllaskk 74
           +vkvs++g+++++++dl+ + +++dL +a+ + +                        l++se+ ++YeD+dGD++ l++D++++++v+      
   Q: 134  FVKVSMDGAPYLRKVDLNMYKTYQDLSMALHKmFSsftigncgsqgmngmnesklmdLLNGSEYVPTYEDKDGDWM-LVGDVPWEMFVE------ 221
           8*******************************6225669999**************99999***************.************...... PP
   S: 75   sllrlliqk 83
           s++rl+i+k
   Q: 222  SCKRLRIMK 230
           ********8 PP

Organism

Brachypodium distachyon

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MAAADLGFEA TELRLGLPGG DGGEQARKRG FAETIDLKLK LEPAGEEEPA AAEEEVEVKA 60
EVPESEEEKA ADGGKMKRSP SQSSVVTAAA AAMADPAEKP RAPKAQVVGW PPVRSFRKNI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG CGGACCTGGG CTTCGAGGCG ACCGAGCTCC GGCTCGGGCT GCCCGGCGGC 60
GACGGAGGAG AGCAAGCGAG GAAGAGGGGC TTCGCGGAGA CCATCGACCT GAAGCTCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

bdi:100833839

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002559	Amborella trichopoda	60.00	2.00e-76	278.00
IUUC-Aly-006188	Arabidopsis lyrata	53.31	1.00e-64	238.00
IUUC-Ath-007356	Arabidopsis thaliana	54.78	2.00e-70	258.00
IUUC-Bol-016371	Brassica oleracea	55.43	2.00e-70	257.00
IUUC-Bra-016936	Brassica rapa	54.31	4.00e-68	249.00
IUUC-Cel-018552	Caenorhabditis elegans	56.25	9.70e-01	25.40
IUUC-Gma-043280	Glycine max	55.60	2.00e-69	254.00
IUUC-Hvu-047087	Hordeum vulgare	93.15	3.00e-77	279.00
IUUC-Lpe-050724	Leersia perrieri	61.61	1.00e-55	208.00
IUUC-Mtr-058641	Medicago truncatula	58.87	1.00e-72	265.00
IUUC-Mac-065450	Musa acuminata	64.38	5.00e-73	266.00
IUUC-Oba-075945	Oryza barthii	64.24	3.00e-78	283.00
IUUC-Obr-076745	Oryza brachyantha	73.83	2.00e-87	313.00
IUUC-Ogl-077429	Oryza glaberrima	65.73	2.00e-73	267.00
IUUC-Ogu-078911	Oryza glumaepatula	64.36	1.00e-84	305.00
IUUC-Oin-079136	Oryza indica	63.70	4.00e-81	293.00
IUUC-Olo-080519	Oryza longistaminata	62.41	5.00e-45	172.00
IUUC-Oni-082674	Oryza nivara	64.41	4.00e-78	283.00
IUUC-Osa-086164	Oryza sativa	63.70	4.00e-81	293.00
IUUC-Ppa-095740	Physcomitrella patens	41.42	3.00e-31	128.00
IUUC-Pop-099516	Populus trichocarpa	62.66	1.00e-72	265.00
IUUC-Ppe-101719	Prunus persica	60.87	1.00e-67	248.00
IUUC-Smo-109586	Selaginella moellendorffii	48.02	1.00e-35	142.00
IUUC-Sit-110063	Setaria italica	71.79	8.00e-89	318.00
IUUC-Sly-111769	Solanum lycopersicum	58.08	6.00e-75	272.00
IUUC-Stu-112038	Solanum tuberosum	58.08	1.00e-72	265.00
IUUC-Sbi-114725	Sorghum bicolor	70.37	8.00e-77	279.00
IUUC-Tca-121261	Theobroma cacao	62.85	8.00e-77	279.00
IUUC-Tre-122196	Trichoderma reesei	34.62	6.40e-01	28.50
IUUC-Tae-124253	Triticum aestivum	78.43	2.00e-88	318.00
IUUC-Tur-126762	Triticum urartu	64.88	2.00e-76	278.00
IUUC-Vvi-131458	Vitis vinifera	61.81	7.00e-76	275.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence