iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043505

Ensembl Protein ID

GLYMA10G32340.1

UniProt Accession

D2DGW4; D2DGW4_SOYBN

Genbank Protein ID

ACR39367.1; KRH34377.1

Protein Name

Auxin-induced protein

Genbank Nucleotide ID

FJ534642; CM000843

Gene Name

SLR1; GLYMA_10G180100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA10G32340	GLYMA10G32340.1	GLYMA10G32340.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	9.10e-16	59.4	123	220

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsllas 72
           +vkvs++g+++++++dl  + +++dL +a+++ +                         l+ se+ ++YeD+dGD++ l++D++++++v     
   Q: 123  FVKVSMDGAPYLRKVDLTMYKSYKDLSDALAKmFSsftmgnygaqgmidfmnesklmdLLNSSEYVPTYEDKDGDWM-LVGDVPWEMFVG---- 211
           8*******************************62256699*****************88888***************.************.... PP
   S: 73   kksllrlliqk 83
             s++rl+i+k
   Q: 212  --SCKRLRIMK 220
           ..********8 PP

Organism

Glycine max

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MTTMLTNEHG LSLNLKETEL CLGLPGGGSE VETPRATGKR GFSETVDLKL NLQTKEDLNE 60
NLKNVSKEKT LLKDPAKPPA KAQVVGWPPV RSYRKNMMAV QKVSNEEVAE KTTSSTIANS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTAACCTGA TATGACATAC GCATGCAGCC ACAAGCACAA GTTCCTCAAA GCTATATTAT 60
TGAGGGCTAT CACACACGTT CTCTCTCTCT TGTAATCTAT ATAGCCAAAC AAACCAAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

gmx:547949

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	62.96	2.00e-51	194.00
IUUC-Atr-002559	Amborella trichopoda	64.73	4.00e-81	293.00
IUUC-Aly-005852	Arabidopsis lyrata	75.86	9.00e-97	345.00
IUUC-Ath-006734	Arabidopsis thaliana	74.27	6.00e-96	343.00
IUUC-Bol-015767	Brassica oleracea	75.00	1.00e-95	342.00
IUUC-Bra-017555	Brassica rapa	75.42	3.00e-96	343.00
IUUC-Lpe-050724	Leersia perrieri	48.51	4.00e-46	177.00
IUUC-Mtr-058575	Medicago truncatula	87.07	5.00e-101	360.00
IUUC-Mac-065450	Musa acuminata	65.78	4.00e-74	270.00
IUUC-Pop-099950	Populus trichocarpa	77.78	3.00e-104	370.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence