iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076343

Ensembl Protein ID

OB02G16320.1

UniProt Accession

J3LAG5; J3LAG5_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB02G16320	OB02G16320.1	OB02G16320.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	8.30e-09	36.2	1047	1092

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkC 51
           vC+vCg   +d+ s++ C+kC++ +H  Cl+++     p+ + w+Cp+C
   Q: 1047 VCKVCGIDRDDD-SVLLCDKCDSEYHTYCLNPP-LARIPEGN-WYCPSC 1092
           8******99987.7*******************.*******6.****** PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MEFGMSLGCG SCRVKTLWLW SSGDVHLVYQ QLWICISVRT NAPDGAYLTE FTVQLPNFEG 60
LHLKNTTLYA DGNQLIPTFG LAHCLSMKQQ FTSMDRDIMA DGNIAQRSVH LRRKRRDLPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTTTG GCATGTGAGA ATTGTAGCTC TCTGCACAGT GGCATTTTAG AAAAAAAATT 60
CAATTAGGTC CCTGCAATTT ATTATTTACA TTCAACCAAG TTTTGTCAGA TTATATGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR003889--FYrich_C
IPR003888--FYrich_N
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50014--BROMODOMAIN_2
PS51543--FYRC
PS51542--FYRN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00439--Bromodomain
PF00628--PHD
PF15612--WHIM1

SMART

SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0009506--C:plasmodesma
GO:0004402--F:histone acetyltransferase activity
GO:0008270--F:zinc ion binding
GO:0043966--P:histone H3 acetylation
GO:0043967--P:histone H4 acetylation
GO:0048573--P:photoperiodism, flowering
GO:0006355--P:regulation of transcription, DNA-templated
GO:0010223--P:secondary shoot formation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000077	Aegilops tauschii	72.48	0.00e+00	1356.00
IUUC-Atr-002838	Amborella trichopoda	41.07	0.00e+00	1183.00
IUUC-Aly-006097	Arabidopsis lyrata	37.71	0.00e+00	1015.00
IUUC-Ath-007218	Arabidopsis thaliana	37.70	0.00e+00	991.00
IUUC-Bdi-014742	Brachypodium distachyon	72.58	0.00e+00	1341.00
IUUC-Bol-015336	Brassica oleracea	36.91	0.00e+00	1083.00
IUUC-Bra-017998	Brassica rapa	37.39	0.00e+00	1035.00
IUUC-Cre-022637	Chlamydomonas reinhardtii	50.00	4.00e-08	48.10
IUUC-Gma-042823	Glycine max	41.75	0.00e+00	1176.00
IUUC-Hvu-047583	Hordeum vulgare	62.58	0.00e+00	1150.00
IUUC-Lpe-050785	Leersia perrieri	85.37	0.00e+00	3291.00
IUUC-Mtr-058285	Medicago truncatula	39.39	0.00e+00	1154.00
IUUC-Mac-065069	Musa acuminata	48.87	0.00e+00	1016.00
IUUC-Oba-075854	Oryza barthii	90.50	0.00e+00	3531.00
IUUC-Ogl-077886	Oryza glaberrima	90.53	0.00e+00	1817.00
IUUC-Ogu-078887	Oryza glumaepatula	90.50	0.00e+00	3528.00
IUUC-Olo-080668	Oryza longistaminata	89.89	0.00e+00	3546.00
IUUC-Ome-081800	Oryza meridionalis	90.36	0.00e+00	3516.00
IUUC-Oni-082593	Oryza nivara	90.59	0.00e+00	3528.00
IUUC-Opu-083363	Oryza punctata	90.34	0.00e+00	3535.00
IUUC-Oru-084298	Oryza rufipogon	90.38	0.00e+00	3490.00
IUUC-Osa-085487	Oryza sativa	89.77	0.00e+00	1733.00
IUUC-Ppa-095893	Physcomitrella patens	39.64	1.00e-104	375.00
IUUC-Ppe-101198	Prunus persica	46.62	0.00e+00	921.00
IUUC-Sit-110633	Setaria italica	71.22	0.00e+00	2646.00
IUUC-Tca-121595	Theobroma cacao	39.34	0.00e+00	1207.00
IUUC-Tae-123821	Triticum aestivum	68.61	0.00e+00	2617.00
IUUC-Tur-126242	Triticum urartu	69.87	0.00e+00	1378.00
IUUC-Vvi-130929	Vitis vinifera	41.78	0.00e+00	1000.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence