iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113788

UUCD1 version

UUC-SoB-01482

Ensembl Protein ID

Sb10g009860.1

UniProt Accession

A0A194YIH9; A0A194YIH9_SORBI

Genbank Protein ID

KXG19779.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G113800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g009860	Sb10g009860.1	Sb10g009860.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.20e-07	30.6	86	128

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle f   ++  + lp C H+fha+C+  w       +k+ +CP+Cr
   Q: 86   CAVCLEAFqagDR-CRQLPrCEHCFHAECVDSW------LRKSSKCPVCR 128
           ********77555.888888*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTNPAAILSV ALLIVGVSLM LAVHILVVFW ALRRGLGSRD TGQHANHQDQ ERVEDGHGRR 60
GLSPGELVTL PCHDFKAADG EAAGDCAVCL EAFQAGDRCR QLPRCEHCFH AECVDSWLRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAAACC CAGCCGCGAT CCTCTCCGTG GCGCTGCTCA TCGTGGGCGT CTCTCTGATG 60
CTCGCCGTGC ACATCCTAGT TGTTTTCTGG GCTCTACGAC GGGGACTCGG CTCCCGCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002505	Amborella trichopoda	46.32	5.00e-20	89.70
IUUC-Bdi-014965	Brachypodium distachyon	51.15	3.00e-33	133.00
IUUC-Gma-043953	Glycine max	50.00	2.00e-18	84.30
IUUC-Mtr-058799	Medicago truncatula	39.06	9.00e-22	95.10
IUUC-Mac-064764	Musa acuminata	63.89	9.00e-22	95.10
IUUC-Oba-075422	Oryza barthii	66.97	5.00e-33	132.00
IUUC-Ogu-078627	Oryza glumaepatula	66.97	5.00e-33	132.00
IUUC-Oin-079447	Oryza indica	63.89	9.00e-30	122.00
IUUC-Ome-081232	Oryza meridionalis	66.97	3.00e-33	133.00
IUUC-Oni-083005	Oryza nivara	69.31	6.00e-32	129.00
IUUC-Opu-083323	Oryza punctata	54.95	4.00e-26	110.00
IUUC-Oru-084954	Oryza rufipogon	63.89	9.00e-30	122.00
IUUC-Osa-085651	Oryza sativa	63.89	9.00e-30	122.00
IUUC-Ppe-102044	Prunus persica	41.94	2.00e-25	107.00
IUUC-Sit-110814	Setaria italica	60.00	4.00e-36	143.00
IUUC-Tca-121009	Theobroma cacao	37.58	1.00e-25	110.00
IUUC-Tae-124255	Triticum aestivum	60.65	2.00e-41	160.00
IUUC-Tur-126037	Triticum urartu	56.05	2.00e-37	147.00
IUUC-Vvi-131134	Vitis vinifera	37.01	7.00e-17	79.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence