iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058241

Ensembl Protein ID

KEH29207

UniProt Accession

A0A072UHQ2; A0A072UHQ2_MEDTR

Genbank Protein ID

KEH29207.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g028960

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g028960	KEH29207	KEH29207

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-31	109.7	280	352

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++++CpIslelMr+Pvv+++G+tydr sI+ w++sg++tcP+t+q+l++ +l+Pn++lr++i  wc+e+++
   Q: 280  VPADYRCPISLELMREPVVVATGQTYDRCSIKLWMDSGHNTCPKTGQTLAHMELIPNHALRNMIAIWCKEQKI 352
           89*******************************************************************9976 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAISPQTFPT TKPPSSETSS FITPNITNFN LLHSLLHLTN QICSLNAAPW CRFLLNKISS 60
STIRKTHLLG VVFDDLIRNS VSSSNSTRQN SYVLCLEEMY IVLHRVKTLL EDCSNGSKFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCATTTTCTT CTAATAATTC TTTCATACCC TTAAGTTCTT CCAATCATCA ATTACCAAAA 60
AATATGGCAA TATCACCTCA AACATTCCCA ACTACTAAAC CACCATCATC AGAAACGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

KEGG

mtr:MTR_4g028960

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000493	Aegilops tauschii	46.96	1.00e-70	259.00
IUUC-Atr-002566	Amborella trichopoda	43.21	3.00e-119	422.00
IUUC-Aly-005828	Arabidopsis lyrata	53.16	0.00e+00	627.00
IUUC-Ath-007101	Arabidopsis thaliana	52.70	9.00e-180	622.00
IUUC-Bdi-014870	Brachypodium distachyon	44.88	3.00e-116	411.00
IUUC-Bol-015511	Brassica oleracea	51.79	0.00e+00	650.00
IUUC-Bra-017197	Brassica rapa	51.65	0.00e+00	649.00
IUUC-Gma-043531	Glycine max	72.82	0.00e+00	833.00
IUUC-Hvu-047557	Hordeum vulgare	45.79	7.00e-112	397.00
IUUC-Lpe-051445	Leersia perrieri	43.21	2.00e-106	379.00
IUUC-Mac-065033	Musa acuminata	43.64	1.00e-105	376.00
IUUC-Oba-075591	Oryza barthii	43.32	8.00e-109	387.00
IUUC-Obr-076550	Oryza brachyantha	43.06	2.00e-97	349.00
IUUC-Ogl-076947	Oryza glaberrima	44.14	4.00e-108	385.00
IUUC-Ogu-078626	Oryza glumaepatula	43.32	6.00e-109	387.00
IUUC-Oin-080113	Oryza indica	43.17	8.00e-109	387.00
IUUC-Olo-080301	Oryza longistaminata	40.49	2.00e-70	259.00
IUUC-Ome-081924	Oryza meridionalis	44.39	1.00e-111	396.00
IUUC-Oni-082284	Oryza nivara	43.32	6.00e-109	387.00
IUUC-Opu-083971	Oryza punctata	44.34	5.00e-107	381.00
IUUC-Oru-084898	Oryza rufipogon	43.17	1.00e-116	413.00
IUUC-Osa-085986	Oryza sativa	45.26	1.00e-106	380.00
IUUC-Pop-099292	Populus trichocarpa	58.12	0.00e+00	760.00
IUUC-Ppe-101643	Prunus persica	60.17	0.00e+00	783.00
IUUC-Sit-110652	Setaria italica	44.95	3.00e-123	435.00
IUUC-Sly-111346	Solanum lycopersicum	59.89	0.00e+00	757.00
IUUC-Stu-112435	Solanum tuberosum	59.80	0.00e+00	729.00
IUUC-Sbi-114567	Sorghum bicolor	44.05	2.00e-108	385.00
IUUC-Tca-121203	Theobroma cacao	63.19	0.00e+00	798.00
IUUC-Tae-124205	Triticum aestivum	44.80	5.00e-102	364.00
IUUC-Vvi-131545	Vitis vinifera	61.93	0.00e+00	705.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence