iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111856

Ensembl Protein ID

Solyc09g089890.1.1

UniProt Accession

K4CW15; K4CW15_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc09g089890.1	Solyc09g089890.1.1	Solyc09g089890.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.90e-08	34.4	128	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl++f   ++ ++v p C H+fh dC+  w       +++++CPlCr
   Q: 128  CVVCLNEFqenEK-LRVIPnCAHIFHIDCIDVW------LQNNANCPLCR 170
           ********76444.999999*************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MDLVRLKYFE SFSHMKNHTI SPPIFGSPIH SSSNHAGFPI IAVAIIGILA TCVLLVSYYI 60
FVIKCCLNWH RIDLLRRFSI SRNRRVEDPL MIYSPAVENR GLDESVIRSI PVFKYKKREE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCTTG TTAGACTAAA GTATTTTGAA TCTTTTTCAC ATATGAAAAA TCATACAATT 60
AGTCCTCCAA TTTTTGGTTC ACCTATACAT TCTTCATCAA ATCATGCTGG ATTTCCAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101248916

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000279	Aegilops tauschii	35.56	5.00e-37	147.00
IUUC-Atr-003120	Amborella trichopoda	42.34	6.00e-50	190.00
IUUC-Aly-006087	Arabidopsis lyrata	50.00	3.00e-78	284.00
IUUC-Ath-006598	Arabidopsis thaliana	52.41	2.00e-81	294.00
IUUC-Bdi-014676	Brachypodium distachyon	43.38	3.00e-28	117.00
IUUC-Bol-015196	Brassica oleracea	54.77	2.00e-77	282.00
IUUC-Bra-017431	Brassica rapa	52.70	7.00e-80	290.00
IUUC-Gma-043661	Glycine max	53.91	7.00e-79	286.00
IUUC-Hvu-047348	Hordeum vulgare	34.62	1.00e-35	142.00
IUUC-Lpe-051091	Leersia perrieri	38.66	1.00e-39	155.00
IUUC-Mtr-057939	Medicago truncatula	53.75	1.00e-77	282.00
IUUC-Mac-065300	Musa acuminata	41.79	1.00e-59	222.00
IUUC-Oba-075181	Oryza barthii	36.17	4.00e-38	151.00
IUUC-Obr-076646	Oryza brachyantha	38.30	1.00e-42	165.00
IUUC-Ogl-077643	Oryza glaberrima	36.73	2.00e-38	151.00
IUUC-Ogu-078678	Oryza glumaepatula	36.17	5.00e-38	150.00
IUUC-Oin-080156	Oryza indica	36.77	9.00e-39	152.00
IUUC-Olo-080454	Oryza longistaminata	36.63	4.00e-38	151.00
IUUC-Oni-082085	Oryza nivara	35.96	9.00e-38	150.00
IUUC-Opu-083709	Oryza punctata	38.32	7.00e-39	153.00
IUUC-Oru-084579	Oryza rufipogon	36.63	5.00e-37	147.00
IUUC-Osa-085466	Oryza sativa	36.33	2.00e-37	148.00
IUUC-Pop-098991	Populus trichocarpa	60.95	7.00e-85	306.00
IUUC-Ppe-101210	Prunus persica	58.65	6.00e-83	300.00
IUUC-Sit-110640	Setaria italica	33.45	5.00e-33	134.00
IUUC-Stu-111992	Solanum tuberosum	91.01	4.00e-153	533.00
IUUC-Sbi-114204	Sorghum bicolor	35.37	4.00e-27	114.00
IUUC-Tca-121116	Theobroma cacao	59.59	3.00e-98	350.00
IUUC-Tae-123538	Triticum aestivum	36.04	1.00e-37	149.00
IUUC-Tur-126127	Triticum urartu	35.34	8.00e-35	139.00
IUUC-Vvi-131101	Vitis vinifera	61.86	7.00e-87	313.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence