iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048523

Ensembl Protein ID

ENSSTOP00000021274.1

UniProt Accession

I3NA77; I3NA77_ICTTR

Genbank Protein ID

ENSSTOP00000021274

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01070727

Gene Name

CBX4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000028205.1	ENSSTOT00000024818.1	ENSSTOP00000021274.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	90.37	0.00e+00	862.00	IUUC-Hsa-046374
E3 activity/Other	89.75	0.00e+00	850.00	IUUC-Mmu-063344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MELPAVGEHV FAVESIEKKR IRKGRVEYLV KWRGWSPKYN TWEPEENILD PRLLIAFQNR 60
ERQEQLMGYR KRGPKPKPLV VQVPTFARRS NVLTGLQDSS ADNRTKLELG TPGKGQGHQY 120

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Nucleotide Sequence
(Fasta)

CTGCAGCCTT GCCGGCCCCG GCGCCCCGGC GCGCTCCGGC TCGGCCATGG AGCTGCCAGC 60
TGTTGGCGAG CACGTCTTCG CGGTGGAGAG CATCGAGAAG AAGCGGATCC GCAAGGTAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome

Interpro

IPR033773--CBX7_C
IPR000953--Chromo/chromo_shadow_dom
IPR017984--Chromo_dom_subgr
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR023779--Chromodomain_CS

PROSITE

PS00598--CHROMO_1
PS50013--CHROMO_2

Pfam

PF17218--CBX7_C
PF00385--Chromo

PRINTS

PR00504--CHROMODOMAIN

SMART

SM00298--CHROMO

Gene Ontology

GO:0016604--C:nuclear body
GO:0035102--C:PRC1 complex
GO:0003682--F:chromatin binding
GO:0003727--F:single-stranded RNA binding
GO:0044212--F:transcription regulatory region DNA binding
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0016925--P:protein sumoylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001747	Ailuropoda melanoleuca	86.23	0.00e+00	726.00
IUUC-Atr-003112	Amborella trichopoda	52.94	4.00e-11	62.40
IUUC-Apl-003876	Anas platyrhynchos	64.75	5.00e-76	276.00
IUUC-Aca-004445	Anolis carolinensis	48.70	1.00e-110	392.00
IUUC-Aly-006366	Arabidopsis lyrata	53.33	9.00e-12	64.30
IUUC-Ath-006608	Arabidopsis thaliana	53.33	1.00e-11	64.30
IUUC-Ame-010980	Astyanax mexicanus	42.53	2.00e-98	352.00
IUUC-Bta-013216	Bos taurus	74.11	0.00e+00	635.00
IUUC-Bdi-014604	Brachypodium distachyon	39.74	2.00e-12	66.60
IUUC-Bol-015449	Brassica oleracea	55.56	2.00e-12	66.60
IUUC-Bra-017229	Brassica rapa	55.56	2.00e-12	67.00
IUUC-Cja-018821	Callithrix jacchus	87.69	0.00e+00	808.00
IUUC-Cfa-020457	Canis familiaris	89.41	0.00e+00	676.00
IUUC-Cpo-021550	Cavia porcellus	84.91	0.00e+00	813.00
IUUC-Csa-024090	Chlorocebus sabaeus	87.70	0.00e+00	831.00
IUUC-Dre-027769	Danio rerio	70.35	1.00e-68	253.00
IUUC-Dno-028987	Dasypus novemcinctus	83.72	2.00e-125	441.00
IUUC-Dse-031204	Dothistroma septosporum	40.54	1.30e+00	26.20
IUUC-Eca-033419	Equus caballus	84.91	4.00e-105	374.00
IUUC-Fca-035513	Felis catus	90.95	0.00e+00	766.00
IUUC-Gmo-038639	Gadus morhua	40.43	1.00e-85	310.00
IUUC-Gga-040221	Gallus gallus	62.39	8.00e-162	563.00
IUUC-Gac-042105	Gasterosteus aculeatus	42.05	1.00e-91	330.00
IUUC-Ggo-044433	Gorilla gorilla	83.30	0.00e+00	726.00
IUUC-Hsa-046374	Homo sapiens	88.95	0.00e+00	798.00
IUUC-Hvu-047395	Hordeum vulgare	42.86	3.00e-09	55.80
IUUC-Lch-050606	Latimeria chalumnae	50.18	3.00e-134	471.00
IUUC-Loc-052513	Lepisosteus oculatus	74.60	3.00e-71	260.00
IUUC-Laf-053583	Loxodonta africana	78.86	3.00e-102	363.00
IUUC-Mcc-055070	Macaca mulatta	87.88	0.00e+00	696.00
IUUC-Meu-055954	Macropus eugenii	77.56	8.00e-122	429.00
IUUC-Mga-059417	Meleagris gallopavo	55.20	3.00e-111	395.00
IUUC-Mmr-060774	Microcebus murinus	88.41	0.00e+00	807.00
IUUC-Mdo-062825	Monodelphis domestica	74.90	0.00e+00	701.00
IUUC-Mmu-063344	Mus musculus	89.39	0.00e+00	822.00
IUUC-Mpu-066193	Mustela putorius furo	87.48	0.00e+00	743.00
IUUC-Mlu-067939	Myotis lucifugus	85.88	0.00e+00	745.00
IUUC-Nle-069889	Nomascus leucogenys	92.86	4.00e-34	137.00
IUUC-Ont-071531	Oreochromis niloticus	42.73	2.00e-95	342.00
IUUC-Ocu-074528	Oryctolagus cuniculus	78.63	8.00e-138	483.00
IUUC-Oba-075909	Oryza barthii	37.93	6.00e-12	64.70
IUUC-Obr-076678	Oryza brachyantha	42.86	2.00e-11	63.50
IUUC-Ogl-077833	Oryza glaberrima	37.93	8.00e-12	64.70
IUUC-Ogu-078599	Oryza glumaepatula	37.93	7.00e-12	64.70
IUUC-Oni-082564	Oryza nivara	37.93	6.00e-12	65.10
IUUC-Opu-083875	Oryza punctata	37.93	8.00e-12	64.70
IUUC-Oru-084465	Oryza rufipogon	37.93	7.00e-12	64.70
IUUC-Osa-085995	Oryza sativa	37.93	7.00e-12	64.70
IUUC-Ola-086942	Oryzias latipes	45.39	2.00e-94	339.00
IUUC-Oga-088509	Otolemur garnettii	91.17	0.00e+00	865.00
IUUC-Oar-089503	Ovis aries	89.38	0.00e+00	758.00
IUUC-Ptr-091416	Pan troglodytes	88.95	0.00e+00	798.00
IUUC-Pan-092459	Papio anubis	88.79	0.00e+00	835.00
IUUC-Psi-093173	Pelodiscus sinensis	56.00	1.00e-114	405.00
IUUC-Pfo-096252	Poecilia formosa	42.52	3.00e-96	345.00
IUUC-Pab-097991	Pongo abelii	87.47	0.00e+00	657.00
IUUC-Pca-100744	Procavia capensis	80.18	0.00e+00	743.00
IUUC-Pte-104285	Pyrenophora teres	45.71	3.00e-03	35.00
IUUC-Rno-105878	Rattus norvegicus	96.63	2.00e-110	392.00
IUUC-Sha-107505	Sarcophilus harrisii	76.98	2.00e-160	558.00
IUUC-Spo-108161	Schizosaccharomyces pombe	27.54	7.00e-04	39.30
IUUC-Sit-110439	Setaria italica	53.33	1.00e-11	63.90
IUUC-Sly-111669	Solanum lycopersicum	44.64	5.00e-12	65.50
IUUC-Stu-112251	Solanum tuberosum	39.44	2.00e-12	67.00
IUUC-Ssc-115965	Sus scrofa	90.45	0.00e+00	832.00
IUUC-Tgu-117367	Taeniopygia guttata	53.04	2.00e-127	448.00
IUUC-Tru-118234	Takifugu rubripes	39.66	2.00e-84	305.00
IUUC-Tni-120129	Tetraodon nigroviridis	40.53	3.00e-75	275.00
IUUC-Tae-124603	Triticum aestivum	44.29	2.00e-09	56.60
IUUC-Ttr-128982	Tursiops truncatus	85.88	0.00e+00	724.00
IUUC-Vvi-131282	Vitis vinifera	46.81	4.00e-11	62.40
IUUC-Xtr-132586	Xenopus tropicalis	56.45	2.00e-102	365.00
IUUC-Xma-133102	Xiphophorus maculatus	41.77	1.00e-93	336.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence