iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014994

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100829517; BRADI_3g45380

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G45380	BRADI3G45380.1	BRADI3G45380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.80e-36	122.7	17	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +vp +f+CpIslelM+dPv++++G+tydr+sIe w+a+g++tcPvtr+pl++ +l+Pn+tlrrliq+wc +++s
   Q: 17   QVPWYFRCPISLELMQDPVTVATGQTYDRASIESWVATGNTTCPVTRAPLADFTLIPNHTLRRLIQEWCVAHRS 90
           69*******************************************************************99975 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MPGSVPLALG LDTVGLQVPW YFRCPISLEL MQDPVTVATG QTYDRASIES WVATGNTTCP 60
VTRAPLADFT LIPNHTLRRL IQEWCVAHRS LGVERIPTPK QPADPDLIRS LIAQCPGLPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCAGGGA GCGTGCCGCT GGCGCTGGGG CTGGACACGG TGGGGCTCCA GGTGCCGTGG 60
TACTTCCGGT GCCCGATCTC GCTGGAGCTG ATGCAGGACC CGGTGACGGT GGCCACGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100829517

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000645	Aegilops tauschii	90.05	2.00e-148	517.00
IUUC-Atr-002952	Amborella trichopoda	50.47	3.00e-70	258.00
IUUC-Aly-005606	Arabidopsis lyrata	46.37	2.00e-81	295.00
IUUC-Ath-006933	Arabidopsis thaliana	47.53	3.00e-78	284.00
IUUC-Bol-015539	Brassica oleracea	48.01	1.00e-71	263.00
IUUC-Bra-017123	Brassica rapa	48.24	8.00e-72	263.00
IUUC-Gma-043153	Glycine max	49.17	3.00e-89	321.00
IUUC-Hvu-047378	Hordeum vulgare	90.29	1.00e-149	522.00
IUUC-Lpe-050781	Leersia perrieri	91.22	6.00e-73	266.00
IUUC-Mtr-058307	Medicago truncatula	47.67	4.00e-76	277.00
IUUC-Mvi-060511	Microbotryum violaceum	41.18	3.00e-05	42.00
IUUC-Mac-064526	Musa acuminata	61.87	2.00e-72	265.00
IUUC-Oba-075168	Oryza barthii	90.51	6.00e-64	235.00
IUUC-Obr-076528	Oryza brachyantha	94.44	4.00e-60	224.00
IUUC-Ogl-077566	Oryza glaberrima	91.28	4.00e-71	261.00
IUUC-Ogu-078818	Oryza glumaepatula	91.28	6.00e-71	259.00
IUUC-Oin-079962	Oryza indica	91.28	7.00e-69	256.00
IUUC-Olo-080858	Oryza longistaminata	89.29	2.00e-41	159.00
IUUC-Oni-082172	Oryza nivara	83.49	8.00e-117	412.00
IUUC-Opu-083930	Oryza punctata	92.57	3.00e-73	268.00
IUUC-Oru-084509	Oryza rufipogon	83.49	8.00e-117	412.00
IUUC-Osa-085902	Oryza sativa	83.49	8.00e-117	412.00
IUUC-Pop-100012	Populus trichocarpa	50.84	6.00e-90	323.00
IUUC-Ppe-101571	Prunus persica	50.24	9.00e-77	279.00
IUUC-Smo-108904	Selaginella moellendorffii	44.14	2.00e-69	255.00
IUUC-Sit-110186	Setaria italica	92.52	7.00e-71	260.00
IUUC-Sly-111810	Solanum lycopersicum	50.97	9.00e-85	306.00
IUUC-Stu-112274	Solanum tuberosum	51.79	6.00e-87	313.00
IUUC-Sbi-114366	Sorghum bicolor	93.24	2.00e-73	268.00
IUUC-Tca-121177	Theobroma cacao	50.36	5.00e-100	357.00
IUUC-Tae-123086	Triticum aestivum	90.05	2.00e-148	517.00
IUUC-Tur-126112	Triticum urartu	90.53	7.00e-150	522.00
IUUC-Uma-129520	Ustilago maydis	35.71	3.00e-06	45.10
IUUC-Vvi-131329	Vitis vinifera	50.00	2.00e-82	298.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence