iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099432

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

UBIQUITIN-SPECIFIC PROTEASE 27 family protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_718963; POPTR_0007s07040g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s07040	POPTR_0007s07040.1	POPTR_0007s07040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.20e-39	136.2	61	258

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle..kkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgye 88
           Gl+NlgN C++N +LQ+L ++++++++l +  ++ e+++ e+  +++ +l+ +l+ l+eel   ++++ + spr+++ a++++ ++f+ ++
   Q: 61   GLQNLGNNCFLNVILQALGSCSNFQSFLQKviEEWESFAGEE-WNESLQLTVALAALLEELSviSRESIVLSPRKVMLAMAHYIQNFNLTS 150
           9***************************99986666666665.68999*************988999999********************* PP
   S: 89   qqDaqEflaflldqleeelkk...eknkpkeeeeeedkselsde........aeekkkkknkslisdlFqgqlksqikclecdnvssreep 168
           qqDa+E + +ll++l++e++     k+++  +++     ++++         + ++++++ ++     F+g l+s ++c++c +       
   Q: 151  QQDAEEAFLHLLSSLRDEFSDsylPKHHSLADAF-----ASPNCriltpnriEIQSEQERWQQHFLGPFDGILSSILTCQSCST------- 229
           *******************442222222222222.....222223344444455555555566666667777777777777765....... PP
   S: 169  fldlslpvpgkeetkke....slqdcLesftkeeelegenkyycekck 212
                           e     l+dcL++ft  e++e+   y+c++c 
   Q: 230  ----------------ErvgcRLEDCLRQFTVSEQVEN---YSCSHCW 258
           ................3333367777777777777774...7777775 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKTNWVSASG LAAVLGVAGL VLALIKDPKS WNLKLSVLPS WLELNQRENN NRPKKLFLLP 60
GLQNLGNNCF LNVILQALGS CSNFQSFLQK VIEEWESFAG EEWNESLQLT VALAALLEEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCAATACT CATAGACAAT CTTTTATCTC ACATGAAGAC GAATTGGGTT TCAGCATCTG 60
GGCTTGCAGC TGTTTTGGGG GTTGCTGGTT TGGTGTTGGC TCTAATAAAA GATCCCAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0007s07040g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000204	Aegilops tauschii	38.03	2.00e-28	119.00
IUUC-Atr-002510	Amborella trichopoda	42.31	5.00e-42	165.00
IUUC-Aly-005754	Arabidopsis lyrata	46.10	6.00e-58	217.00
IUUC-Ath-007622	Arabidopsis thaliana	45.10	5.00e-62	231.00
IUUC-Bdi-014795	Brachypodium distachyon	35.78	7.00e-31	127.00
IUUC-Bol-015637	Brassica oleracea	44.98	5.00e-61	228.00
IUUC-Bra-016801	Brassica rapa	43.99	8.00e-59	220.00
IUUC-Gma-043364	Glycine max	54.27	1.00e-66	246.00
IUUC-Hvu-047422	Hordeum vulgare	48.67	5.00e-25	105.00
IUUC-Lpe-051078	Leersia perrieri	39.02	7.00e-43	167.00
IUUC-Mtr-057976	Medicago truncatula	54.30	2.00e-70	259.00
IUUC-Mac-065296	Musa acuminata	42.86	1.00e-38	152.00
IUUC-Oba-075765	Oryza barthii	39.31	2.00e-43	169.00
IUUC-Obr-076005	Oryza brachyantha	41.98	1.00e-49	190.00
IUUC-Ogl-077916	Oryza glaberrima	42.69	1.00e-51	196.00
IUUC-Ogu-078263	Oryza glumaepatula	39.31	2.00e-43	169.00
IUUC-Oin-080096	Oryza indica	42.76	1.00e-26	114.00
IUUC-Olo-080702	Oryza longistaminata	31.19	1.00e-17	85.10
IUUC-Ome-081928	Oryza meridionalis	40.71	1.00e-45	177.00
IUUC-Oni-082424	Oryza nivara	39.31	5.00e-43	168.00
IUUC-Opu-083371	Oryza punctata	43.10	2.00e-45	177.00
IUUC-Oru-085117	Oryza rufipogon	39.31	5.00e-43	168.00
IUUC-Ppa-096015	Physcomitrella patens	32.13	5.00e-25	108.00
IUUC-Ppe-101898	Prunus persica	58.94	1.00e-77	283.00
IUUC-Smo-109191	Selaginella moellendorffii	36.86	4.00e-52	197.00
IUUC-Sit-110442	Setaria italica	43.43	4.00e-42	165.00
IUUC-Sly-110928	Solanum lycopersicum	50.84	5.00e-35	141.00
IUUC-Stu-112223	Solanum tuberosum	52.83	1.00e-32	133.00
IUUC-Sbi-114645	Sorghum bicolor	47.62	3.00e-36	144.00
IUUC-Tca-121660	Theobroma cacao	61.94	1.00e-75	277.00
IUUC-Tae-125383	Triticum aestivum	43.65	3.00e-45	176.00
IUUC-Tur-126458	Triticum urartu	43.65	4.00e-45	175.00
IUUC-Vvi-131177	Vitis vinifera	59.13	2.00e-70	259.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence