iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058239

Ensembl Protein ID

KEH39667

UniProt Accession

G7ZYZ1; G7ZYZ1_MEDTR

Genbank Protein ID

KEH39667.1

Protein Name

DNA repair protein RAD23-1, putative

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g105410

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g105410	KEH39667	KEH39667

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	6.40e-21	75.2	144	185
ULD/UDP/UBQ/UBQ_PIM	1.10e-22	81.1	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e+ ++ql++MG   +dr+++ +aLraa+nn+e+Av+yL++g
   Q: 144  LEQTIQQLIDMGggsWDRDTVNRALRAAFNNPERAVDYLYSG 185
           799************************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkltvktlkg++fe++v ++d++ ++K++i++ +g   +p+ qq LI++Gk+LkD+ttL +++++++ +++++++ksk
   Q: 1    MKLTVKTLKGSHFEIRVHPSDSIMAVKKNIEDIQGkdnYPCGQQLLIHNGKVLKDETTLADNKVSEDGFLVVMLSKSK 78
           99*************************************************************************987 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MKLTVKTLKG SHFEIRVHPS DSIMAVKKNI EDIQGKDNYP CGQQLLIHNG KVLKDETTLA 60
DNKVSEDGFL VVMLSKSKVL GSAGTSSTQT ASNPPITVPT PDSTSVVQTQ SANNNASPAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTCGTAGT ATACAGAAGG AAAAAGAAGA AAAGAAAAGA GAAGGGAAGA GAAGGGCGTG 60
GTGAAAAAGA GGAAAGTATA CGACTAATTG CTAGGGTTTG TACATTCCAT TCCAATCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

mtr:MTR_2g105410

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000088	Aegilops tauschii	54.48	4.00e-88	317.00
IUUC-Atr-002756	Amborella trichopoda	66.58	5.00e-127	446.00
IUUC-Aly-006159	Arabidopsis lyrata	62.63	1.00e-130	458.00
IUUC-Ath-006674	Arabidopsis thaliana	71.90	2.00e-89	321.00
IUUC-Acl-008212	Aspergillus clavatus	36.82	9.00e-28	117.00
IUUC-Afl-008605	Aspergillus flavus	37.89	6.00e-31	127.00
IUUC-Afu-008877	Aspergillus fumigatus	38.74	6.00e-28	117.00
IUUC-Ani-009460	Aspergillus nidulans	38.37	1.00e-28	119.00
IUUC-Aor-010032	Aspergillus oryzae	33.67	2.00e-37	149.00
IUUC-Ate-010458	Aspergillus terreus	39.69	2.00e-33	135.00
IUUC-Ame-011342	Astyanax mexicanus	30.42	4.00e-33	134.00
IUUC-Bgr-012056	Blumeria graminis	33.58	5.00e-31	127.00
IUUC-Bta-012377	Bos taurus	33.67	2.00e-44	172.00
IUUC-Bdi-014355	Brachypodium distachyon	62.90	4.00e-110	390.00
IUUC-Bol-015272	Brassica oleracea	65.52	2.00e-125	441.00
IUUC-Bra-016970	Brassica rapa	65.18	4.00e-126	443.00
IUUC-Cel-018364	Caenorhabditis elegans	26.58	7.00e-16	77.00
IUUC-Cja-018946	Callithrix jacchus	32.74	3.00e-39	155.00
IUUC-Cpo-021850	Cavia porcellus	33.25	2.00e-47	182.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	42.52	5.00e-23	101.00
IUUC-Cin-025741	Ciona intestinalis	26.74	1.00e-31	129.00
IUUC-Csv-025823	Ciona savignyi	29.00	5.00e-24	103.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	31.22	3.00e-17	82.00
IUUC-Cne-027056	Cryptococcus neoformans	39.29	5.00e-12	64.70
IUUC-Dre-028209	Danio rerio	30.45	1.00e-39	156.00
IUUC-Dme-032027	Drosophila melanogaster	27.08	5.00e-40	157.00
IUUC-Eca-033599	Equus caballus	31.81	5.00e-37	147.00
IUUC-Gma-044077	Glycine max	86.61	2.00e-157	547.00
IUUC-Lpe-051168	Leersia perrieri	63.74	4.00e-116	410.00
IUUC-Loc-051758	Lepisosteus oculatus	32.28	3.00e-43	168.00
IUUC-Lma-053328	Leptosphaeria maculans	38.16	3.00e-10	55.50
IUUC-Laf-054589	Loxodonta africana	31.82	3.00e-41	161.00
IUUC-Mcc-055860	Macaca mulatta	32.82	9.00e-44	170.00
IUUC-Mor-057287	Magnaporthe oryzae	45.90	7.00e-17	80.90
IUUC-Mla-058961	Melampsora laricipopulina	42.65	4.00e-23	101.00
IUUC-Mvi-060220	Microbotryum violaceum	43.18	3.00e-22	99.00
IUUC-Mdo-062742	Monodelphis domestica	33.42	5.00e-50	191.00
IUUC-Mac-064468	Musa acuminata	62.31	1.00e-119	422.00
IUUC-Mpu-066684	Mustela putorius furo	34.35	4.00e-46	177.00
IUUC-Mlu-067787	Myotis lucifugus	34.09	4.00e-43	167.00
IUUC-Nfi-068390	Neosartorya fischeri	39.13	7.00e-28	117.00
IUUC-Ont-072484	Oreochromis niloticus	30.77	8.00e-43	167.00
IUUC-Oan-073572	Ornithorhynchus anatinus	35.66	1.00e-42	166.00
IUUC-Ocu-073793	Oryctolagus cuniculus	27.59	4.00e-29	121.00
IUUC-Oba-074972	Oryza barthii	64.56	3.00e-117	413.00
IUUC-Obr-076909	Oryza brachyantha	66.30	2.00e-120	424.00
IUUC-Ogl-077067	Oryza glaberrima	66.22	5.00e-121	426.00
IUUC-Ogu-078023	Oryza glumaepatula	64.69	1.00e-101	362.00
IUUC-Oin-079203	Oryza indica	66.40	1.00e-120	425.00
IUUC-Olo-080559	Oryza longistaminata	67.21	4.00e-122	430.00
IUUC-Oni-082812	Oryza nivara	64.56	9.00e-117	412.00
IUUC-Opu-083963	Oryza punctata	61.62	7.00e-111	392.00
IUUC-Oru-084942	Oryza rufipogon	62.64	7.00e-106	376.00
IUUC-Osa-085951	Oryza sativa	66.40	1.00e-120	425.00
IUUC-Ola-086540	Oryzias latipes	29.61	2.00e-38	152.00
IUUC-Olu-087843	Ostreococcus lucimarinus	35.45	2.00e-43	169.00
IUUC-Oar-090387	Ovis aries	33.16	2.00e-43	169.00
IUUC-Ppa-095654	Physcomitrella patens	56.96	1.00e-102	365.00
IUUC-Pfo-096607	Poecilia formosa	34.14	1.00e-42	166.00
IUUC-Pab-097738	Pongo abelii	32.35	1.00e-38	152.00
IUUC-Pop-100054	Populus trichocarpa	72.92	2.00e-135	474.00
IUUC-Ppe-101522	Prunus persica	70.13	8.00e-141	492.00
IUUC-Pva-102412	Pteropus vampyrus	32.74	1.00e-43	169.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	33.60	2.00e-40	158.00
IUUC-Spo-108298	Schizosaccharomyces pombe	34.35	1.00e-43	169.00
IUUC-Smo-109518	Selaginella moellendorffii	55.79	1.00e-98	352.00
IUUC-Sit-109813	Setaria italica	58.60	4.00e-105	374.00
IUUC-Sly-111349	Solanum lycopersicum	68.62	2.00e-130	458.00
IUUC-Stu-112306	Solanum tuberosum	66.58	1.00e-121	428.00
IUUC-Sbi-114459	Sorghum bicolor	62.13	2.00e-113	401.00
IUUC-Ssc-115460	Sus scrofa	33.59	2.00e-43	169.00
IUUC-Tgu-116918	Taeniopygia guttata	31.23	1.00e-40	159.00
IUUC-Tru-118651	Takifugu rubripes	29.88	1.00e-41	162.00
IUUC-Tca-121594	Theobroma cacao	76.68	4.00e-141	493.00
IUUC-Tvi-122617	Trichoderma virens	34.21	1.00e-35	143.00
IUUC-Tae-125620	Triticum aestivum	64.13	4.00e-111	393.00
IUUC-Xtr-132679	Xenopus tropicalis	29.88	4.00e-30	125.00
IUUC-Xma-133647	Xiphophorus maculatus	34.23	9.00e-42	163.00
IUUC-Yli-134615	Yarrowia lipolytica	30.59	1.00e-34	139.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence