iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018083

Ensembl Protein ID

Bra011290.1-P

UniProt Accession

M4D486; M4D486_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra011290	Bra011290.1	Bra011290.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.90e-73	248.6	150	455

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEf 95
           +Gl N gN+C+ N +LQcLs +++l  +lle  +++++ +     ++ ++ +++q+ +e   ++++  +sp ++++ l ++   +   +q+Da+Ef
   Q: 150  CGLMNCGNSCFANVILQCLSWTRPLVAYLLErGHRSECMR-----DDWCFFCAFQTHVERA-SQSRYPFSPVNIISRLTNIGGTLGYGRQEDAHEF 239
           7******************************555666655.....578**********999.88899***************************** PP
   S: 96   laflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcL 191
           +++ +d++++ +         +e++ +       +   +  ++++l++ +F+g l+sq++c  c+nvs+++e+++dl+++++g+      sl++cL
   Q: 240  MRYAIDTMQSVC--------LDEFGGE-------KMVPPRCQETTLVQYIFGGVLQSQVQCTVCNNVSEQYENMMDLTVEIHGDAV----SLEECL 316
           ************........3444444.......6788899999*****************************************7....8***** PP
   S: 192  esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHs 287
           ++ft++e l+g+n+y+c++c ++++a k+l++++ P+vL++ LkRf    ++++  k+nk+++fp++Ldl+p++++  e+   ++ Y L+av+vH 
   Q: 317  DQFTAREWLQGDNMYKCDRCSDYVKACKRLTIRRPPNVLTIALKRF----KGGRYGKLNKRISFPETLDLRPYMSQGGEG---SDVYTLYAVIVHL 405
           **********************************************....778999********************6655...79**********9 PP
   S: 288  Gslss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
             l+    GHY++y+k+ +g+W+++dDs++++v+ e+vl+   + aY+l+Y r
   Q: 406  DMLNAsffGHYICYIKDFSGNWYRIDDSEIESVELEDVLS---QRAYMLLYSR 455
           95554455********************************...9*******87 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MHEVGFPLDL SVLTRLIPSL FFLAVGVFYF LRNTAAKYFD IGAAAAGGFD RELVAEDCTT 60
KCSRCNSVRY CSEECQTSDW SSGHQRRCRE IGITTLTPSA RNSLRFRASR FGDCPERDQN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCATGAGG TTGGCTTTCC GCTGGATCTC TCTGTCCTCA CTCGCCTGAT ACCGTCTCTC 60
TTCTTCCTCG CCGTCGGTGT CTTTTACTTC CTCAGAAACA CCGCCGCTAA GTACTTCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002997	Amborella trichopoda	53.09	1.00e-152	533.00
IUUC-Aly-005863	Arabidopsis lyrata	76.34	0.00e+00	933.00
IUUC-Ath-007277	Arabidopsis thaliana	77.36	0.00e+00	945.00
IUUC-Bol-016178	Brassica oleracea	95.62	0.00e+00	1130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence