iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-131963

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01051106

Gene Name

rnf38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000006554.2	ENSXETT00000014343.2	ENSXETP00000014343.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-08	35.5	412	453

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C++df+    ++vlpC+H fha+C+ kw       + + +CP+Cr
   Q: 412  CVVCMCDFESRqlLRVLPCNHEFHAKCVDKW------LKANRTCPICR 453
           ********4434599****************......**********8 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MYCNEDSPSP KRQRLSNSVF EYAAASPAPS PPMRPWEMTS NRRPPSARPH QHHFSGERCN 60
TPARNRRSPP VRRQRGRRER LSRHNSISQD ENYHHLSYGQ QQAVEEPRAF HPPNVSPRML 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCAGTTGGA GTGCTAGGTC CAGCCAAGCA GCGCCTACTC TCACCCGCCG GAGCGCCAGG 60
CCTGGTTATT CGGGAGAGGT GACTGTGTAT ATAGCATTAT GTACTGTGTA TGTATATCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

xtr:594927

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001752	Ailuropoda melanoleuca	93.75	0.00e+00	702.00
IUUC-Atr-003122	Amborella trichopoda	45.95	3.00e-15	76.30
IUUC-Apl-003246	Anas platyrhynchos	88.02	0.00e+00	698.00
IUUC-Aca-005355	Anolis carolinensis	95.01	0.00e+00	688.00
IUUC-Aly-005825	Arabidopsis lyrata	39.56	9.00e-14	70.90
IUUC-Ath-007389	Arabidopsis thaliana	40.00	8.00e-14	70.90
IUUC-Bta-012401	Bos taurus	94.21	0.00e+00	674.00
IUUC-Bra-017837	Brassica rapa	40.00	6.00e-14	71.20
IUUC-Cja-018848	Callithrix jacchus	93.13	0.00e+00	733.00
IUUC-Cfa-020501	Canis familiaris	95.14	0.00e+00	673.00
IUUC-Cpo-021722	Cavia porcellus	92.67	0.00e+00	699.00
IUUC-Csa-024088	Chlorocebus sabaeus	95.14	0.00e+00	681.00
IUUC-Cho-024540	Choloepus hoffmanni	75.43	1.00e-149	522.00
IUUC-Dre-028201	Danio rerio	69.40	3.00e-132	465.00
IUUC-Dno-029482	Dasypus novemcinctus	93.53	0.00e+00	704.00
IUUC-Dor-030261	Dipodomys ordii	82.11	0.00e+00	660.00
IUUC-Dse-031302	Dothistroma septosporum	47.73	8.00e-11	62.00
IUUC-Ete-032580	Echinops telfairi	84.05	1.00e-179	622.00
IUUC-Eca-033264	Equus caballus	94.91	0.00e+00	689.00
IUUC-Eeu-035181	Erinaceus europaeus	85.56	0.00e+00	637.00
IUUC-Fca-036484	Felis catus	93.75	0.00e+00	703.00
IUUC-Fal-037568	Ficedula albicollis	94.04	0.00e+00	712.00
IUUC-Gga-040685	Gallus gallus	93.26	0.00e+00	672.00
IUUC-Ggo-044571	Gorilla gorilla	93.75	0.00e+00	712.00
IUUC-Hsa-046118	Homo sapiens	93.75	0.00e+00	712.00
IUUC-Itr-048953	Ictidomys tridecemlineatus	93.71	0.00e+00	703.00
IUUC-Lch-050401	Latimeria chalumnae	92.62	0.00e+00	721.00
IUUC-Loc-052875	Lepisosteus oculatus	84.92	6.00e-161	560.00
IUUC-Lma-052952	Leptosphaeria maculans	32.74	4.00e-11	63.20
IUUC-Laf-054381	Loxodonta africana	94.14	0.00e+00	702.00
IUUC-Mcc-055576	Macaca mulatta	93.75	0.00e+00	712.00
IUUC-Meu-056433	Macropus eugenii	88.92	5.00e-139	487.00
IUUC-Mla-058928	Melampsora laricipopulina	40.91	5.00e-10	57.40
IUUC-Mga-059597	Meleagris gallopavo	90.43	0.00e+00	652.00
IUUC-Mmr-061247	Microcebus murinus	93.53	0.00e+00	710.00
IUUC-Mdo-061822	Monodelphis domestica	95.83	0.00e+00	708.00
IUUC-Mmu-064200	Mus musculus	92.89	0.00e+00	701.00
IUUC-Mpu-066571	Mustela putorius furo	93.75	0.00e+00	704.00
IUUC-Mlu-067948	Myotis lucifugus	93.53	0.00e+00	723.00
IUUC-Nle-069466	Nomascus leucogenys	93.75	0.00e+00	712.00
IUUC-Ont-072424	Oreochromis niloticus	67.06	2.00e-132	465.00
IUUC-Oan-073236	Ornithorhynchus anatinus	83.04	2.00e-180	625.00
IUUC-Ocu-073866	Oryctolagus cuniculus	93.33	0.00e+00	748.00
IUUC-Oga-087997	Otolemur garnettii	93.97	0.00e+00	712.00
IUUC-Oar-090272	Ovis aries	92.89	0.00e+00	704.00
IUUC-Ptr-091566	Pan troglodytes	93.97	0.00e+00	714.00
IUUC-Pan-091884	Papio anubis	93.75	0.00e+00	712.00
IUUC-Psi-093539	Pelodiscus sinensis	96.53	0.00e+00	715.00
IUUC-Pab-098694	Pongo abelii	95.14	0.00e+00	681.00
IUUC-Pca-100704	Procavia capensis	75.47	4.00e-109	388.00
IUUC-Pva-103055	Pteropus vampyrus	93.24	0.00e+00	660.00
IUUC-Pgr-103263	Puccinia graminis	48.98	6.00e-10	59.30
IUUC-Rno-105006	Rattus norvegicus	94.44	0.00e+00	700.00
IUUC-Sly-111677	Solanum lycopersicum	47.95	3.00e-15	75.90
IUUC-Stu-112327	Solanum tuberosum	47.95	2.00e-15	76.60
IUUC-Sar-112966	Sorex araneus	94.89	0.00e+00	687.00
IUUC-Ssc-115502	Sus scrofa	93.97	0.00e+00	706.00
IUUC-Tgu-117480	Taeniopygia guttata	90.26	0.00e+00	690.00
IUUC-Tsy-118844	Tarsius syrichta	88.79	0.00e+00	653.00
IUUC-Tae-123101	Triticum aestivum	38.46	5.00e-16	78.20
IUUC-Tbe-127237	Tupaia belangeri	82.54	4.00e-179	620.00
IUUC-Ttr-129073	Tursiops truncatus	93.24	0.00e+00	659.00
IUUC-Vpa-130240	Vicugna pacos	96.31	2.00e-146	511.00
IUUC-Xma-133395	Xiphophorus maculatus	60.19	6.00e-120	424.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence