iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099941

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KE703199

Gene Name

POPTRDRAFT_768347; POPTR_0497s00200g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0497s00200	POPTR_0497s00200.1	POPTR_0497s00200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.60e-33	115.0	5	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceen 72
           +vp +flCpIsl+lMrdPv++++Gitydr++Ie+wl s+++ tcPvt+q+l  +dl+Pn+tlrrliqawc  n
   Q: 5    DVPYHFLCPISLQLMRDPVTISTGITYDRENIERWLFSCKNnTCPVTKQELFGKDLTPNHTLRRLIQAWCTLN 77
           6899********************************998888****************************877 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDQIDVPYHF LCPISLQLMR DPVTISTGIT YDRENIERWL FSCKNNTCPV TKQELFGKDL 60
TPNHTLRRLI QAWCTLNASF GIERIPTPKP PIERAQIAKL LNDAKKFPHL QLKSLRRLRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCAAA TCGATGTTCC TTATCATTTT CTTTGCCCAA TTTCGCTTCA ACTCATGAGA 60
GATCCAGTTA CAATCTCTAC TGGGATTACC TATGATAGAG AGAACATTGA GAGATGGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0497s00200g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000941	Aegilops tauschii	47.02	1.00e-89	322.00
IUUC-Atr-002430	Amborella trichopoda	49.76	1.00e-116	412.00
IUUC-Bdi-014627	Brachypodium distachyon	49.18	8.00e-103	366.00
IUUC-Gma-043606	Glycine max	66.59	6.00e-161	559.00
IUUC-Hvu-047293	Hordeum vulgare	47.67	3.00e-91	327.00
IUUC-Mtr-057893	Medicago truncatula	68.51	8.00e-152	529.00
IUUC-Ppa-095659	Physcomitrella patens	38.25	2.00e-69	256.00
IUUC-Ppe-101254	Prunus persica	66.75	1.00e-161	562.00
IUUC-Sly-111791	Solanum lycopersicum	60.67	4.00e-150	523.00
IUUC-Stu-112204	Solanum tuberosum	61.39	2.00e-147	514.00
IUUC-Sbi-114243	Sorghum bicolor	49.88	3.00e-99	354.00
IUUC-Tca-121274	Theobroma cacao	74.22	0.00e+00	637.00
IUUC-Tae-124810	Triticum aestivum	47.97	2.00e-100	358.00
IUUC-Tur-126719	Triticum urartu	45.69	1.00e-96	346.00
IUUC-Vvi-131173	Vitis vinifera	71.08	2.00e-178	617.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence