iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006913

UUCD1 version

UUC-ArT-00221

Ensembl Protein ID

AT2G22680.1

UniProt Accession

Q9ZQ46; Q9ZQ46_ARATH

Genbank Protein ID

AAD15576.1; AAM14062.1; AAN13147.1; AAZ14056.1; AEC07340.1

Protein Name

At2g22680; Copia-like retroelement pol polyprotein; Putative copia-like retroelement pol polyprotein; Zinc finger (C3HC4-type RING finger) family protein

Genbank Nucleotide ID

AC006340; AY091112; AY142578; DQ086852; CP002685

Gene Name

WAVH1; WAV3 homolog 1; At2g22680; T9I22.12; T9I22_12

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G22680	AT2G22680.1	AT2G22680.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein-protein Interaction
iRefIndex	Mentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	15644464

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	0.0014	20.0	130	176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg....plvlpCgHvfhadCl.qkwpglknssskefrCPlC 45
           C iCl++ k g     ++  C H+fh+ C+  +      + ++ ++CP+C
   Q: 130  CGICLQSVKSGqgtaIFTAECSHTFHFPCVtSRA---AANHNRLASCPVC 176
           9*******555555599999*********96333...355777889**** PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MLNGWRRAFC TSIPKETNQN DVDDDGLVGL RHKSTSRFGF FSTPSTPRSD SGTGTYSLRC 60
RTSTATAVST TSSLPGTPKL KCKTTTTGET TPRNRSLVSL LTPSSSSISP ASFTLLKSKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAGACTC CTTTTTAAAT TCAACCTCTC CCACCTTCTC TCTGCAACTC TCTCATTTTC 60
TTAAAATCTC TTTCTCACAG AACCAAAAAC CAAAATCTCA GTCTCAAACA AACAACAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002035--VWF_A
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50234--VWFA
PS50089--ZF_RING_2

Pfam

PF13519--VWA_2
PF17123--zf-RING_11

SMART

SM00184--RING
SM00327--VWA

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ath:AT2G22680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002481	Amborella trichopoda	40.19	2.00e-87	316.00
IUUC-Bol-015437	Brassica oleracea	73.31	0.00e+00	845.00
IUUC-Bra-016884	Brassica rapa	79.30	0.00e+00	794.00
IUUC-Gma-043422	Glycine max	46.29	7.00e-125	440.00
IUUC-Mtr-058319	Medicago truncatula	44.28	6.00e-131	460.00
IUUC-Oba-075241	Oryza barthii	36.97	1.00e-55	210.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence