iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110258

Ensembl Protein ID

Si009327m

UniProt Accession

K3Y539; K3Y539_SETIT

Genbank Protein ID

KQK98702.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003534

Gene Name

LOC101758037; SETIT_009327mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si009327m.g	Si009327m	Si009327m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-57	188.8	157	196
UBD/Beta-Prp	4.50e-114	381.6	420	675

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt+ vt + f   +   ll sGs Dgt++vW+l t +++
   Q: 157  GHTGIVTTIMFhkdPKrLLLFSGSEDGTVRVWNLETKKCV 196
           8***********76555668**************999986 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvw.......dls...tgkcvhtlkghedsvlslsfspsgd 107
           s +k+l++tgs+d+t+++wd+++  ++ + +gh ++v +v fs+++k ++v+gs+Drtik+w       d +         ++ +h++++ sls+sp++ 
   Q: 420  SSGKTLVVTGSKDNTVRLWDAERRRCIGTGKGHLGAVGSVAFSKKSKnFFVSGSSDRTIKIWtwddtldDADdevPLRAKAVVAAHDKDINSLSVSPNDG 519
           56899**************************************99888**************77765544444443334445669*************** PP
   S: 108  klvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklw 207
            + sGs+drt+ +w+l++   +  +l+gh++ +++v+++  +++++++s Drt+++W+++ g++l+t++g ht+sv   sf s g++++s++ dg vklw
   Q: 520  LVCSGSEDRTACIWKLPNLVSSV-VLKGHKRGIWSVEFSLVEQCVMTSSGDRTIKIWSVADGTCLKTFEG-HTSSVLRASFLSRGTQVISCGSDGLVKLW 617
           ***********************.*********************************************9.***************************** PP
   S: 208  dlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdllktlqlhn 264
            ++t+ec+ t+  h+  v+ +++ +++e l++g+ D  +++W d++  d    + +++
   Q: 618  TIKTNECIATYDKHDGKVWALAVGRKTEMLATGGTDSILNLWhDCTMEDKQEDFRKKE 675
           *******************************************999888887777766 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MASTQALKKN YRCDRSLQQF YTGGPFAVGR PPAGEGEGEG GAEADPFLAC ACGGEVRVVS 60
AADASAIGEP VDGDSEAITA LTLSPDSRLL FAAGHSRLIR VWDLATRTCI RSWKGHDGPI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCGACGAC CCACCGCCGT TGCCGCGGCC GCCGAAATTA GCTATGGCGT CGACGCAGGC 60
GCTTAAGAAG AACTACCGCT GCGACCGCTC GCTGCAGCAG TTCTACACGG GCGGGCCGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0051301--P:cell division
GO:0009793--P:embryo development ending in seed dormancy
GO:0009880--P:embryonic pattern specification
GO:0006364--P:rRNA processing

KEGG

sita:101758037

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	78.67	0.00e+00	1333.00
IUUC-Aml-002376	Ailuropoda melanoleuca	37.42	6.00e-156	543.00
IUUC-Atr-002486	Amborella trichopoda	62.25	0.00e+00	1085.00
IUUC-Apl-003519	Anas platyrhynchos	31.60	2.00e-107	382.00
IUUC-Aca-004363	Anolis carolinensis	33.33	6.00e-73	267.00
IUUC-Aly-006152	Arabidopsis lyrata	62.38	0.00e+00	1061.00
IUUC-Ath-006966	Arabidopsis thaliana	61.99	0.00e+00	1061.00
IUUC-Ago-007746	Ashbya gossypii	31.22	6.00e-107	381.00
IUUC-Acl-008009	Aspergillus clavatus	28.77	1.00e-103	370.00
IUUC-Afl-008681	Aspergillus flavus	29.78	5.00e-99	355.00
IUUC-Afu-008798	Aspergillus fumigatus	28.19	2.00e-96	346.00
IUUC-Ani-009278	Aspergillus nidulans	29.66	1.00e-110	393.00
IUUC-Ang-009640	Aspergillus niger	31.98	1.00e-111	397.00
IUUC-Aor-010160	Aspergillus oryzae	29.74	1.00e-98	353.00
IUUC-Ate-010320	Aspergillus terreus	29.81	7.00e-107	381.00
IUUC-Ame-010930	Astyanax mexicanus	34.60	4.00e-37	146.00
IUUC-Bgr-012054	Blumeria graminis	30.37	2.00e-101	362.00
IUUC-Bta-012611	Bos taurus	37.90	7.00e-151	527.00
IUUC-Bci-013797	Botrytis cinerea	29.52	8.00e-108	384.00
IUUC-Bdi-014384	Brachypodium distachyon	84.60	0.00e+00	1469.00
IUUC-Bol-016483	Brassica oleracea	60.14	0.00e+00	1055.00
IUUC-Bra-017798	Brassica rapa	61.20	0.00e+00	1034.00
IUUC-Cel-018664	Caenorhabditis elegans	27.46	2.00e-93	336.00
IUUC-Cja-019092	Callithrix jacchus	36.96	7.00e-155	540.00
IUUC-Cfa-021040	Canis familiaris	36.95	8.00e-155	540.00
IUUC-Cpo-022529	Cavia porcellus	37.44	2.00e-148	518.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	55.47	1.00e-47	180.00
IUUC-Csa-024205	Chlorocebus sabaeus	37.32	1.00e-156	546.00
IUUC-Cin-025560	Ciona intestinalis	36.59	1.00e-150	526.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	31.74	2.00e-121	429.00
IUUC-Cne-027082	Cryptococcus neoformans	30.67	2.00e-119	423.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.29	2.00e-36	147.00
IUUC-Dre-028138	Danio rerio	36.41	8.00e-153	533.00
IUUC-Dno-029914	Dasypus novemcinctus	35.47	1.00e-105	376.00
IUUC-Dor-030685	Dipodomys ordii	40.32	3.00e-101	362.00
IUUC-Dse-031429	Dothistroma septosporum	29.87	4.00e-113	402.00
IUUC-Dme-031995	Drosophila melanogaster	30.29	4.00e-93	335.00
IUUC-Ete-033086	Echinops telfairi	41.03	7.00e-93	334.00
IUUC-Eca-034354	Equus caballus	37.41	8.00e-148	516.00
IUUC-Eeu-034832	Erinaceus europaeus	39.82	4.00e-89	322.00
IUUC-Fca-036136	Felis catus	34.85	8.00e-129	453.00
IUUC-Fal-036859	Ficedula albicollis	37.74	4.00e-158	551.00
IUUC-Fox-037863	Fusarium oxysporum	30.47	7.00e-106	377.00
IUUC-Fso-038389	Fusarium solani	29.35	3.00e-114	405.00
IUUC-Gmo-038711	Gadus morhua	35.02	8.00e-138	483.00
IUUC-Ggr-039820	Gaeumannomyces graminis	29.98	6.00e-109	388.00
IUUC-Gga-040263	Gallus gallus	37.53	5.00e-160	557.00
IUUC-Gac-041291	Gasterosteus aculeatus	37.72	3.00e-164	571.00
IUUC-Gma-044026	Glycine max	64.67	0.00e+00	1121.00
IUUC-Ggo-044693	Gorilla gorilla	36.97	2.00e-153	535.00
IUUC-Hsa-046048	Homo sapiens	36.85	2.00e-153	535.00
IUUC-Hvu-047608	Hordeum vulgare	84.39	0.00e+00	1458.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	37.65	2.00e-162	565.00
IUUC-Kpa-049209	Komagataella pastoris	31.35	4.00e-118	418.00
IUUC-Lch-050085	Latimeria chalumnae	37.30	9.00e-149	520.00
IUUC-Lpe-050945	Leersia perrieri	82.53	0.00e+00	1387.00
IUUC-Loc-052679	Lepisosteus oculatus	38.48	3.00e-176	611.00
IUUC-Laf-053685	Loxodonta africana	36.92	1.00e-143	503.00
IUUC-Mcc-055861	Macaca mulatta	37.68	1.00e-153	536.00
IUUC-Meu-056820	Macropus eugenii	35.06	2.00e-117	415.00
IUUC-Mor-057234	Magnaporthe oryzae	30.61	2.00e-101	363.00
IUUC-Mpo-057456	Magnaporthe poae	30.25	3.00e-81	295.00
IUUC-Mtr-058122	Medicago truncatula	62.75	0.00e+00	1087.00
IUUC-Mla-058980	Melampsora laricipopulina	30.26	1.00e-86	313.00
IUUC-Mga-060080	Meleagris gallopavo	36.16	5.00e-157	547.00
IUUC-Mvi-060338	Microbotryum violaceum	34.95	1.00e-144	506.00
IUUC-Mmr-060762	Microcebus murinus	37.67	2.00e-151	529.00
IUUC-Mdo-061975	Monodelphis domestica	38.26	1.00e-155	542.00
IUUC-Mmu-064038	Mus musculus	37.20	3.00e-152	531.00
IUUC-Mac-065189	Musa acuminata	67.21	0.00e+00	1181.00
IUUC-Mpu-066526	Mustela putorius furo	37.41	2.00e-149	522.00
IUUC-Mlu-067716	Myotis lucifugus	38.02	4.00e-167	580.00
IUUC-Nfi-068474	Neosartorya fischeri	28.69	1.00e-100	360.00
IUUC-Ncr-068826	Neurospora crassa	28.19	1.00e-100	360.00
IUUC-Nle-069832	Nomascus leucogenys	36.96	3.00e-156	545.00
IUUC-Opr-071183	Ochotona princeps	37.39	1.00e-148	519.00
IUUC-Ont-072371	Oreochromis niloticus	38.89	2.00e-167	582.00
IUUC-Oan-073491	Ornithorhynchus anatinus	36.61	5.00e-128	451.00
IUUC-Ocu-074894	Oryctolagus cuniculus	28.67	5.00e-26	112.00
IUUC-Oba-075963	Oryza barthii	84.70	0.00e+00	1460.00
IUUC-Obr-076173	Oryza brachyantha	86.11	0.00e+00	1436.00
IUUC-Ogl-077692	Oryza glaberrima	84.58	0.00e+00	1456.00
IUUC-Ogu-078965	Oryza glumaepatula	84.70	0.00e+00	1460.00
IUUC-Oin-079708	Oryza indica	84.23	0.00e+00	1453.00
IUUC-Olo-080679	Oryza longistaminata	84.58	0.00e+00	1460.00
IUUC-Oni-082960	Oryza nivara	84.11	0.00e+00	1452.00
IUUC-Opu-083282	Oryza punctata	84.07	0.00e+00	1422.00
IUUC-Oru-085224	Oryza rufipogon	84.46	0.00e+00	1456.00
IUUC-Osa-085320	Oryza sativa	84.46	0.00e+00	1456.00
IUUC-Ola-086370	Oryzias latipes	31.21	2.00e-75	276.00
IUUC-Olu-087814	Ostreococcus lucimarinus	35.05	2.00e-122	433.00
IUUC-Oga-088458	Otolemur garnettii	37.18	3.00e-160	558.00
IUUC-Oar-090032	Ovis aries	36.64	3.00e-113	401.00
IUUC-Ptr-090749	Pan troglodytes	36.82	4.00e-153	534.00
IUUC-Pan-091691	Papio anubis	36.11	2.00e-143	502.00
IUUC-Psi-093200	Pelodiscus sinensis	36.01	7.00e-156	543.00
IUUC-Pma-094165	Petromyzon marinus	35.92	1.00e-111	397.00
IUUC-Pno-095048	Phaeosphaeria nodorum	31.50	5.00e-94	338.00
IUUC-Ppa-095336	Physcomitrella patens	51.52	0.00e+00	873.00
IUUC-Pfo-096132	Poecilia formosa	38.44	7.00e-163	566.00
IUUC-Pab-097855	Pongo abelii	36.80	8.00e-156	543.00
IUUC-Pop-099434	Populus trichocarpa	61.63	0.00e+00	1048.00
IUUC-Pca-100232	Procavia capensis	34.69	7.00e-55	208.00
IUUC-Ppe-101665	Prunus persica	61.71	0.00e+00	1095.00
IUUC-Pva-102178	Pteropus vampyrus	37.30	4.00e-156	544.00
IUUC-Pgr-103288	Puccinia graminis	27.97	2.00e-86	313.00
IUUC-Ptt-103808	Puccinia triticina	31.14	3.00e-83	302.00
IUUC-Pte-104205	Pyrenophora teres	31.93	1.00e-112	400.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	30.43	4.00e-104	371.00
IUUC-Rno-105617	Rattus norvegicus	38.04	9.00e-157	546.00
IUUC-Sce-106281	Saccharomyces cerevisiae	31.39	1.00e-108	386.00
IUUC-Sha-107378	Sarcophilus harrisii	38.27	5.00e-155	541.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	33.41	1.00e-119	423.00
IUUC-Spo-108361	Schizosaccharomyces pombe	31.62	8.00e-120	424.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	30.80	2.00e-115	409.00
IUUC-Smo-109257	Selaginella moellendorffii	53.42	0.00e+00	885.00
IUUC-Sly-111521	Solanum lycopersicum	62.36	0.00e+00	1063.00
IUUC-Stu-112718	Solanum tuberosum	68.61	2.00e-50	190.00
IUUC-Sar-113586	Sorex araneus	42.76	8.00e-26	111.00
IUUC-Sbi-114768	Sorghum bicolor	91.18	0.00e+00	1564.00
IUUC-Sre-115159	Sporisorium reilianum	31.32	3.00e-89	323.00
IUUC-Ssc-116342	Sus scrofa	28.67	3.00e-70	259.00
IUUC-Tgu-117320	Taeniopygia guttata	37.01	8.00e-146	510.00
IUUC-Tru-118024	Takifugu rubripes	38.29	1.00e-162	566.00
IUUC-Tsy-119360	Tarsius syrichta	28.67	5.00e-26	112.00
IUUC-Tni-119971	Tetraodon nigroviridis	38.31	4.00e-164	571.00
IUUC-Tca-121248	Theobroma cacao	66.91	0.00e+00	1080.00
IUUC-Tre-122079	Trichoderma reesei	29.44	5.00e-111	394.00
IUUC-Tvi-122554	Trichoderma virens	28.95	2.00e-110	393.00
IUUC-Tae-125865	Triticum aestivum	85.70	0.00e+00	1451.00
IUUC-Tur-126436	Triticum urartu	78.75	0.00e+00	1171.00
IUUC-Tme-126942	Tuber melanosporum	32.99	2.00e-118	419.00
IUUC-Tbe-128000	Tupaia belangeri	34.65	3.00e-20	93.20
IUUC-Ttr-128964	Tursiops truncatus	35.94	6.00e-151	527.00
IUUC-Uma-129473	Ustilago maydis	30.44	7.00e-98	351.00
IUUC-Vda-129749	Verticillium dahliae	30.51	2.00e-105	376.00
IUUC-Vvi-131511	Vitis vinifera	64.70	0.00e+00	1088.00
IUUC-Xtr-132816	Xenopus tropicalis	32.86	1.00e-130	459.00
IUUC-Xma-133672	Xiphophorus maculatus	38.72	2.00e-168	586.00
IUUC-Yli-134602	Yarrowia lipolytica	34.68	3.00e-133	468.00
IUUC-Zma-135976	Zea mays	85.83	0.00e+00	1501.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence