iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA02G46570	GLYMA02G46570.2	GLYMA02G46570.2
GLYMA02G46570	GLYMA02G46570.3	GLYMA02G46570.3
GLYMA02G46570	GLYMA02G46570.4	GLYMA02G46570.4
GLYMA02G46570	GLYMA02G46570.5	GLYMA02G46570.5
GLYMA02G46570	GLYMA02G46570.1	GLYMA02G46570.1
GLYMA02G46570	GLYMA02G46570.6	GLYMA02G46570.6
GLYMA02G46570	GLYMA02G46570.7	GLYMA02G46570.7
GLYMA02G46570	GLYMA02G46570.8	GLYMA02G46570.8
GLYMA02G46570	GLYMA02G46570.9	GLYMA02G46570.9
GLYMA02G46570	GLYMA02G46570.10	GLYMA02G46570.10
GLYMA02G46570	GLYMA02G46570.11	GLYMA02G46570.11
GLYMA02G46570	GLYMA02G46570.12	GLYMA02G46570.12
GLYMA02G46570	GLYMA02G46570.13	GLYMA02G46570.13
GLYMA02G46570	GLYMA02G46570.14	GLYMA02G46570.14
GLYMA02G46570	GLYMA02G46570.15	GLYMA02G46570.15
GLYMA02G46570	GLYMA02G46570.16	GLYMA02G46570.16

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.40e-08	36.4	291	355

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedek....slveCek..CrewfHpaClkls...........veeelpnsekwiCp 49
           + C  Cg+ g+++k    ++++C    C++ +Hp+C+               e++  ++ ++iCp
   Q: 291  HQCFACGKLGSSDKvkgaEVIKCVSatCDRFYHPHCVAKLlpqlakpvaedLERNIADRVPFICP 355
           56***********88899*****9999**********8777788888877777777788888887 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MKRSRSSSED EAETEAEVQS LSVSNYHIVD DEDNPVSFAV LPIHWSDSEN SEAANKGKVF 60
IDGDTDNGLK KIFMQVTAWR FDLSNVRLEI SLLSKDGRWI KLQKPRKGFQ NKIRTVLITL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGAAGAAG AAGATAGTGA CGTGAAGATC GCAGCGCCAA AATTTTAGAT TGTTTAAATC 60
AAATCTAAAA CAAGGGTTTA AATCAAACTC ACCATAGCAA ACACTCCTCA CTTCTGCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR022702--Cytosine_MeTrfase1_RFD
IPR029063--SAM-dependent_MTases
IPR001965--Znf_PHD
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF12047--DNMT1-RFD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

gmx:100806429

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000732	Aegilops tauschii	30.37	1.00e-24	106.00
IUUC-Atr-002482	Amborella trichopoda	51.39	0.00e+00	677.00
IUUC-Aly-006105	Arabidopsis lyrata	48.89	0.00e+00	796.00
IUUC-Ath-007426	Arabidopsis thaliana	49.11	0.00e+00	803.00
IUUC-Bdi-014781	Brachypodium distachyon	48.10	6.00e-58	219.00
IUUC-Bol-016001	Brassica oleracea	47.65	0.00e+00	789.00
IUUC-Bra-017864	Brassica rapa	47.47	0.00e+00	780.00
IUUC-Cre-022844	Chlamydomonas reinhardtii	36.92	2.60e-01	28.90
IUUC-Cho-024405	Choloepus hoffmanni	29.01	1.00e-09	58.50
IUUC-Cgl-026395	Colletotrichum gloeosporioides	31.43	3.60e-01	30.00
IUUC-Dno-030020	Dasypus novemcinctus	27.70	1.00e-13	72.40
IUUC-Lpe-051201	Leersia perrieri	46.15	1.00e-50	194.00
IUUC-Loc-052581	Lepisosteus oculatus	28.30	4.00e-14	71.60
IUUC-Oan-072724	Ornithorhynchus anatinus	30.19	2.00e-12	68.20
IUUC-Oba-075813	Oryza barthii	40.06	5.00e-178	619.00
IUUC-Obr-076122	Oryza brachyantha	48.54	2.00e-35	142.00
IUUC-Ogl-077641	Oryza glaberrima	49.10	2.00e-53	202.00
IUUC-Ogu-078898	Oryza glumaepatula	50.45	1.00e-53	203.00
IUUC-Oin-079557	Oryza indica	49.55	2.00e-53	202.00
IUUC-Olo-080581	Oryza longistaminata	31.38	2.00e-37	149.00
IUUC-Ome-081770	Oryza meridionalis	49.55	2.00e-53	202.00
IUUC-Oni-082657	Oryza nivara	49.55	2.00e-53	202.00
IUUC-Opu-083479	Oryza punctata	33.90	4.00e-41	161.00
IUUC-Oru-084464	Oryza rufipogon	50.45	8.00e-54	204.00
IUUC-Osa-085353	Oryza sativa	49.55	2.00e-53	202.00
IUUC-Sly-111281	Solanum lycopersicum	43.75	2.00e-140	492.00
IUUC-Stu-112457	Solanum tuberosum	59.86	3.00e-51	194.00
IUUC-Sbi-114581	Sorghum bicolor	44.31	4.00e-34	138.00
IUUC-Tae-125914	Triticum aestivum	33.47	3.00e-30	125.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence