iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099495

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_557309; POPTR_0009s11310g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s11310	POPTR_0009s11310.1	POPTR_0009s11310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.90e-08	33.8	157	199

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f+d   +++lp C H+fh dC+  w       + +++CPlCr
   Q: 157  CAVCLLEFEDDeyVRTLPvCSHAFHVDCIDIW------LRSHANCPLCR 199
           ****99994444499999**************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MIKTTPSPSP SPHHHHTWAP SPTPTISSTP RATAPSYQSS PPSPSPTSKL PVDFSPTLIA 60
MVVVVAAAFL TITYSRLISR SLLRVIRRWR RWRRRRRRRY PPSSNGGLDS PPPLFDSPEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCACAAAA CAAAGAAACA ACACTCACAC ACACAAAAAC TCAAAGCACC AGCACCATTA 60
ACACCTCCTT CCACCACCAC TACCACCATG ATCAAAACCA CACCATCCCC TTCTCCCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0009s11310g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002525	Amborella trichopoda	45.71	2.00e-59	222.00
IUUC-Aly-005738	Arabidopsis lyrata	47.96	4.00e-64	238.00
IUUC-Ath-006761	Arabidopsis thaliana	45.62	3.00e-64	238.00
IUUC-Afu-008977	Aspergillus fumigatus	40.96	1.00e-10	60.50
IUUC-Bdi-014398	Brachypodium distachyon	40.08	2.00e-29	123.00
IUUC-Bol-015520	Brassica oleracea	47.37	1.00e-62	233.00
IUUC-Bra-017477	Brassica rapa	47.68	2.00e-62	232.00
IUUC-Gma-043732	Glycine max	67.45	4.00e-103	367.00
IUUC-Lpe-051662	Leersia perrieri	37.50	8.00e-27	114.00
IUUC-Mtr-058344	Medicago truncatula	56.99	3.00e-83	301.00
IUUC-Mac-065095	Musa acuminata	58.82	5.00e-27	114.00
IUUC-Ogu-077985	Oryza glumaepatula	34.84	1.00e-25	110.00
IUUC-Oin-079093	Oryza indica	37.13	5.00e-23	101.00
IUUC-Opu-083940	Oryza punctata	36.80	5.00e-29	121.00
IUUC-Oru-084986	Oryza rufipogon	34.33	5.00e-18	84.70
IUUC-Ppe-101726	Prunus persica	64.34	2.00e-101	362.00
IUUC-Pgr-103645	Puccinia graminis	39.33	1.00e-14	73.20
IUUC-Sit-109801	Setaria italica	37.72	1.00e-30	127.00
IUUC-Sly-111253	Solanum lycopersicum	64.26	8.00e-91	326.00
IUUC-Stu-112012	Solanum tuberosum	63.55	5.00e-91	327.00
IUUC-Sbi-114003	Sorghum bicolor	35.89	2.00e-30	126.00
IUUC-Tca-120931	Theobroma cacao	66.41	3.00e-105	374.00
IUUC-Tae-123501	Triticum aestivum	39.65	3.00e-27	115.00
IUUC-Vvi-131492	Vitis vinifera	63.50	4.00e-95	341.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence