iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000030017.5	ENSRNOT00000088529.1	ENSRNOP00000068845.1
ENSRNOG00000030017.5	ENSRNOT00000064255.1	ENSRNOP00000063005.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	76.42	0.00e+00	2107.00	IUUC-Hsa-046895
UBD/Alpha-Helix/UBA	76.42	0.00e+00	2107.00	IUUC-Hsa-046895

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MPHEEIPNST QPQGQDWLPG QHVSADRDIP AGQETAGDSE AGKCLSSPSC DHGPSTSAEA 60
CVLAATRWGP ALLHIDRHQI PAVEPSAQAL ELQGLGVDVY DQAVLEEGVL QQVDSAMHEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTATCACAG ATCTAGGGCG CATGCGCTAA GGTCTGTCTC TACGCTTTGT CGCGGCCGTG 60
GCGACGAAGA TTTCGTCTGG GCGGCCGCGT GGTCCTGGGT GAGTGTTCGG CAGCGGGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0005829--C:cytosol
GO:0005794--C:Golgi apparatus
GO:0005730--C:nucleolus
GO:0008023--C:transcription elongation factor complex
GO:0005524--F:ATP binding
GO:0003682--F:chromatin binding
GO:0003677--F:DNA binding
GO:0008094--F:DNA-dependent ATPase activity
GO:0030296--F:protein tyrosine kinase activator activity
GO:0007256--P:activation of JNKK activity
GO:0007257--P:activation of JUN kinase activity
GO:0006284--P:base-excision repair
GO:0008630--P:intrinsic apoptotic signaling pathway in response to DNA damage
GO:0035264--P:multicellular organism growth
GO:0045494--P:photoreceptor cell maintenance
GO:0032786--P:positive regulation of DNA-templated transcription, elongation
GO:0006290--P:pyrimidine dimer repair
GO:0010332--P:response to gamma radiation
GO:0000303--P:response to superoxide
GO:0009636--P:response to toxic substance
GO:0010224--P:response to UV-B
GO:0010165--P:response to X-ray
GO:0006362--P:transcription elongation from RNA polymerase I promoter
GO:0006283--P:transcription-coupled nucleotide-excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000518	Aegilops tauschii	52.48	0.00e+00	634.00
IUUC-Aml-002021	Ailuropoda melanoleuca	75.52	0.00e+00	2073.00
IUUC-Atr-002868	Amborella trichopoda	52.46	6.00e-180	625.00
IUUC-Apl-003989	Anas platyrhynchos	71.23	0.00e+00	1432.00
IUUC-Aca-004609	Anolis carolinensis	59.61	0.00e+00	1538.00
IUUC-Aly-005912	Arabidopsis lyrata	51.10	0.00e+00	628.00
IUUC-Ath-006812	Arabidopsis thaliana	51.37	4.00e-180	625.00
IUUC-Ago-007719	Ashbya gossypii	52.90	6.00e-177	614.00
IUUC-Acl-008050	Aspergillus clavatus	54.24	3.00e-175	609.00
IUUC-Afl-008677	Aspergillus flavus	55.13	2.00e-166	580.00
IUUC-Afu-008975	Aspergillus fumigatus	54.06	1.00e-175	610.00
IUUC-Ani-009464	Aspergillus nidulans	54.27	4.00e-175	608.00
IUUC-Ang-009516	Aspergillus niger	54.24	1.00e-164	574.00
IUUC-Aor-010057	Aspergillus oryzae	50.62	8.00e-169	587.00
IUUC-Ate-010307	Aspergillus terreus	54.90	5.00e-165	575.00
IUUC-Ame-011055	Astyanax mexicanus	62.66	0.00e+00	1219.00
IUUC-Bgr-012211	Blumeria graminis	51.94	1.00e-163	571.00
IUUC-Bta-012761	Bos taurus	71.11	0.00e+00	1873.00
IUUC-Bci-013603	Botrytis cinerea	54.14	2.00e-178	620.00
IUUC-Bdi-014031	Brachypodium distachyon	52.30	0.00e+00	629.00
IUUC-Bol-015096	Brassica oleracea	52.23	0.00e+00	635.00
IUUC-Bra-017583	Brassica rapa	52.55	0.00e+00	629.00
IUUC-Cel-018275	Caenorhabditis elegans	36.73	4.00e-106	379.00
IUUC-Cja-019733	Callithrix jacchus	79.40	0.00e+00	1590.00
IUUC-Cfa-020631	Canis familiaris	74.25	0.00e+00	2039.00
IUUC-Cpo-022218	Cavia porcellus	72.98	0.00e+00	1430.00
IUUC-Cre-022710	Chlamydomonas reinhardtii	50.09	2.00e-152	534.00
IUUC-Csa-023723	Chlorocebus sabaeus	76.90	0.00e+00	2075.00
IUUC-Cho-024312	Choloepus hoffmanni	71.53	0.00e+00	912.00
IUUC-Cin-025376	Ciona intestinalis	68.10	0.00e+00	781.00
IUUC-Cgl-026654	Colletotrichum gloeosporioides	51.53	3.00e-162	566.00
IUUC-Cme-027109	Cyanidioschyzon merolae	51.43	5.00e-155	541.00
IUUC-Dre-028672	Danio rerio	63.59	0.00e+00	1181.00
IUUC-Dno-028893	Dasypus novemcinctus	73.75	0.00e+00	1930.00
IUUC-Dor-031114	Dipodomys ordii	68.28	0.00e+00	1773.00
IUUC-Dse-031225	Dothistroma septosporum	53.26	3.00e-180	626.00
IUUC-Ete-032713	Echinops telfairi	67.48	0.00e+00	866.00
IUUC-Eca-034071	Equus caballus	75.05	0.00e+00	2023.00
IUUC-Eeu-034781	Erinaceus europaeus	75.83	0.00e+00	1590.00
IUUC-Fca-036561	Felis catus	74.41	0.00e+00	2035.00
IUUC-Fal-037343	Ficedula albicollis	61.05	0.00e+00	1608.00
IUUC-Fox-037667	Fusarium oxysporum	52.01	1.00e-155	544.00
IUUC-Fso-038331	Fusarium solani	52.69	1.00e-159	557.00
IUUC-Gmo-039132	Gadus morhua	64.74	0.00e+00	1167.00
IUUC-Gga-040376	Gallus gallus	74.85	0.00e+00	1425.00
IUUC-Gac-042326	Gasterosteus aculeatus	60.66	0.00e+00	1131.00
IUUC-Gma-043401	Glycine max	50.70	1.00e-178	620.00
IUUC-Ggo-044844	Gorilla gorilla	77.69	0.00e+00	2107.00
IUUC-Hsa-046895	Homo sapiens	77.42	0.00e+00	2096.00
IUUC-Itr-048071	Ictidomys tridecemlineatus	78.21	0.00e+00	2156.00
IUUC-Kpa-049261	Komagataella pastoris	48.23	0.00e+00	654.00
IUUC-Lch-049934	Latimeria chalumnae	58.22	0.00e+00	1305.00
IUUC-Lpe-051249	Leersia perrieri	47.86	5.00e-147	515.00
IUUC-Loc-052591	Lepisosteus oculatus	61.15	0.00e+00	1502.00
IUUC-Lma-053210	Leptosphaeria maculans	51.92	1.00e-166	581.00
IUUC-Laf-054403	Loxodonta africana	75.33	0.00e+00	2001.00
IUUC-Mcc-054876	Macaca mulatta	77.33	0.00e+00	2109.00
IUUC-Meu-056545	Macropus eugenii	68.80	4.00e-149	522.00
IUUC-Mor-057145	Magnaporthe oryzae	51.14	2.00e-170	593.00
IUUC-Mpo-057493	Magnaporthe poae	51.41	5.00e-166	578.00
IUUC-Mtr-057734	Medicago truncatula	50.26	2.00e-177	616.00
IUUC-Mga-059402	Meleagris gallopavo	72.14	0.00e+00	1436.00
IUUC-Mmr-061791	Microcebus murinus	77.17	0.00e+00	2133.00
IUUC-Mdo-062148	Monodelphis domestica	65.49	0.00e+00	1776.00
IUUC-Mmu-063238	Mus musculus	88.74	0.00e+00	2504.00
IUUC-Mac-064440	Musa acuminata	51.60	6.00e-172	598.00
IUUC-Mpu-066112	Mustela putorius furo	75.45	0.00e+00	2064.00
IUUC-Mlu-067057	Myotis lucifugus	73.69	0.00e+00	2029.00
IUUC-Nfi-068617	Neosartorya fischeri	54.06	2.00e-175	610.00
IUUC-Ncr-068920	Neurospora crassa	45.99	2.00e-170	593.00
IUUC-Nle-069992	Nomascus leucogenys	77.34	0.00e+00	2074.00
IUUC-Opr-070929	Ochotona princeps	71.69	0.00e+00	1649.00
IUUC-Ont-071740	Oreochromis niloticus	62.77	0.00e+00	1214.00
IUUC-Oan-073380	Ornithorhynchus anatinus	65.50	0.00e+00	807.00
IUUC-Ocu-074143	Oryctolagus cuniculus	72.23	0.00e+00	1878.00
IUUC-Oba-075626	Oryza barthii	51.11	2.00e-177	616.00
IUUC-Obr-076240	Oryza brachyantha	51.30	0.00e+00	629.00
IUUC-Ogl-077187	Oryza glaberrima	51.11	1.00e-177	617.00
IUUC-Ogu-078629	Oryza glumaepatula	48.54	3.00e-142	499.00
IUUC-Oin-079268	Oryza indica	50.94	6.00e-178	618.00
IUUC-Olo-080567	Oryza longistaminata	48.34	2.00e-142	500.00
IUUC-Oni-082122	Oryza nivara	51.28	8.00e-178	617.00
IUUC-Opu-083477	Oryza punctata	51.38	0.00e+00	633.00
IUUC-Oru-084783	Oryza rufipogon	51.28	6.00e-178	618.00
IUUC-Osa-086206	Oryza sativa	51.28	9.00e-177	613.00
IUUC-Oga-088414	Otolemur garnettii	74.70	0.00e+00	2033.00
IUUC-Oar-089697	Ovis aries	74.20	0.00e+00	2029.00
IUUC-Ptr-090856	Pan troglodytes	77.54	0.00e+00	2110.00
IUUC-Pan-092521	Papio anubis	77.24	0.00e+00	2100.00
IUUC-Psi-093037	Pelodiscus sinensis	63.39	0.00e+00	1508.00
IUUC-Pma-094456	Petromyzon marinus	66.95	0.00e+00	815.00
IUUC-Pno-094861	Phaeosphaeria nodorum	51.41	2.00e-167	583.00
IUUC-Ppa-095711	Physcomitrella patens	50.00	3.00e-180	625.00
IUUC-Pfo-096223	Poecilia formosa	61.76	0.00e+00	1217.00
IUUC-Pab-098595	Pongo abelii	77.48	0.00e+00	2091.00
IUUC-Pop-099531	Populus trichocarpa	50.51	2.00e-180	626.00
IUUC-Pca-100770	Procavia capensis	70.67	0.00e+00	681.00
IUUC-Ppe-101528	Prunus persica	47.25	3.00e-180	626.00
IUUC-Pva-102247	Pteropus vampyrus	71.11	0.00e+00	1077.00
IUUC-Pte-104217	Pyrenophora teres	53.47	6.00e-170	592.00
IUUC-Pyt-104797	Pyrenophora triticirepentis	52.64	1.00e-171	597.00
IUUC-Sce-106234	Saccharomyces cerevisiae	52.30	3.00e-176	612.00
IUUC-Sha-106622	Sarcophilus harrisii	63.62	0.00e+00	1678.00
IUUC-Sja-107874	Schizosaccharomyces japonicus	53.89	0.00e+00	641.00
IUUC-Spo-108021	Schizosaccharomyces pombe	49.56	0.00e+00	649.00
IUUC-Ssl-108500	Sclerotinia sclerotiorum	54.32	5.00e-177	615.00
IUUC-Smo-109132	Selaginella moellendorffii	50.81	1.00e-172	600.00
IUUC-Sit-110066	Setaria italica	50.25	0.00e+00	630.00
IUUC-Sly-111833	Solanum lycopersicum	52.06	0.00e+00	635.00
IUUC-Stu-112189	Solanum tuberosum	50.91	0.00e+00	633.00
IUUC-Sar-113511	Sorex araneus	65.69	0.00e+00	1455.00
IUUC-Sbi-114606	Sorghum bicolor	51.95	0.00e+00	630.00
IUUC-Ssc-116374	Sus scrofa	76.36	0.00e+00	2118.00
IUUC-Tgu-117153	Taeniopygia guttata	58.13	0.00e+00	1493.00
IUUC-Tru-118178	Takifugu rubripes	62.10	0.00e+00	1219.00
IUUC-Tsy-119524	Tarsius syrichta	75.97	0.00e+00	2086.00
IUUC-Tni-120546	Tetraodon nigroviridis	65.37	0.00e+00	1193.00
IUUC-Tca-121065	Theobroma cacao	49.75	3.00e-179	622.00
IUUC-Tre-121868	Trichoderma reesei	51.87	8.00e-159	554.00
IUUC-Tvi-122455	Trichoderma virens	51.32	2.00e-156	546.00
IUUC-Tae-123249	Triticum aestivum	46.66	0.00e+00	638.00
IUUC-Tur-126107	Triticum urartu	46.51	0.00e+00	635.00
IUUC-Tbe-127967	Tupaia belangeri	74.79	0.00e+00	1016.00
IUUC-Ttr-128768	Tursiops truncatus	75.05	0.00e+00	2100.00
IUUC-Vda-129884	Verticillium dahliae	49.52	5.00e-172	598.00
IUUC-Vpa-130521	Vicugna pacos	77.34	0.00e+00	1022.00
IUUC-Vvi-130838	Vitis vinifera	50.51	8.00e-179	621.00
IUUC-Xtr-132056	Xenopus tropicalis	56.19	0.00e+00	1061.00
IUUC-Xma-133113	Xiphophorus maculatus	61.25	0.00e+00	1208.00
IUUC-Yli-134344	Yarrowia lipolytica	54.82	0.00e+00	632.00
IUUC-Zma-134837	Zea mays	50.51	8.00e-179	621.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence