iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121775

Ensembl Protein ID

EOY24645

UniProt Accession

A0A061G457; A0A061G457_THECC

Genbank Protein ID

EOY24645.1

Protein Name

Zinc finger, C3HC4 type (RING finger) family protein isoform 1

Genbank Nucleotide ID

CM001881

Gene Name

TCM_016194

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_016194	EOY24646	EOY24646
TCM_016194	EOY24645	EOY24645

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-08	34.8	328	369

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg  ++ lpCgH+fh  C+ kw       + +++CPlC+
   Q: 328  CCICLSPYDDGveLRELPCGHHFHCACVDKW------LYINATCPLCK 369
           ********9994455699*************......**********7 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MASTTPTNRS SSDDIIDTTP FLSSSSSVSR DESTTRRSVR RQSLREAARF LRRASSRRMM 60
REPSMLVRET AAEQLEERQS DWAYSKPVVI LDIIWNFAFV AVAVGVLVWS RDERPNMPLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTCCCAAA GATGGCTTCG ACAACTCCAA CGAACCGATC CTCCTCCGAT GACATCATCG 60
ACACGACGCC GTTTCTCTCA TCATCAAGCA GCGTGTCACG GGACGAGTCC ACCACGCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

tcc:TCM_016194

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000315	Aegilops tauschii	63.81	2.00e-82	297.00
IUUC-Atr-002539	Amborella trichopoda	65.39	1.00e-108	385.00
IUUC-Aly-005465	Arabidopsis lyrata	72.94	2.00e-109	387.00
IUUC-Ath-006687	Arabidopsis thaliana	70.00	5.00e-134	469.00
IUUC-Bdi-014788	Brachypodium distachyon	56.74	6.00e-107	379.00
IUUC-Bol-015362	Brassica oleracea	69.17	9.00e-125	439.00
IUUC-Bra-017528	Brassica rapa	63.43	3.00e-117	414.00
IUUC-Gma-043207	Glycine max	74.48	3.00e-124	437.00
IUUC-Hvu-047150	Hordeum vulgare	63.16	1.00e-106	378.00
IUUC-Lpe-051532	Leersia perrieri	65.67	4.00e-99	353.00
IUUC-Mtr-058719	Medicago truncatula	69.92	7.00e-117	412.00
IUUC-Mac-064732	Musa acuminata	63.71	3.00e-116	410.00
IUUC-Oba-075346	Oryza barthii	65.48	2.00e-105	374.00
IUUC-Obr-076817	Oryza brachyantha	64.75	3.00e-82	297.00
IUUC-Ogl-077385	Oryza glaberrima	65.48	2.00e-105	374.00
IUUC-Ogu-078850	Oryza glumaepatula	65.48	3.00e-105	374.00
IUUC-Oin-079121	Oryza indica	64.44	2.00e-96	344.00
IUUC-Olo-080611	Oryza longistaminata	65.64	1.00e-86	314.00
IUUC-Ome-081780	Oryza meridionalis	65.92	6.00e-109	388.00
IUUC-Oni-082330	Oryza nivara	65.48	2.00e-105	374.00
IUUC-Opu-083495	Oryza punctata	66.07	7.00e-100	356.00
IUUC-Oru-084814	Oryza rufipogon	66.37	9.00e-106	375.00
IUUC-Osa-085284	Oryza sativa	66.37	9.00e-106	375.00
IUUC-Ppa-095516	Physcomitrella patens	59.65	3.00e-97	347.00
IUUC-Pop-099381	Populus trichocarpa	77.15	2.00e-119	421.00
IUUC-Ppe-102030	Prunus persica	76.56	8.00e-136	475.00
IUUC-Smo-108796	Selaginella moellendorffii	61.92	6.00e-101	359.00
IUUC-Sit-110742	Setaria italica	65.81	2.00e-107	381.00
IUUC-Sbi-114737	Sorghum bicolor	65.37	2.00e-105	374.00
IUUC-Tae-124948	Triticum aestivum	62.03	5.00e-108	383.00
IUUC-Tur-126321	Triticum urartu	62.58	6.00e-107	380.00
IUUC-Vda-129814	Verticillium dahliae	55.10	2.00e-10	60.10
IUUC-Vvi-131280	Vitis vinifera	78.07	8.00e-122	429.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence