iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090719

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03091228

Gene Name

RNF113B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000005987.3	ENSPTRT00000010995.3	ENSPTRP00000010180.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	99.07	5.00e-171	597.00	IUUC-Hsa-046222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MAAPPSPGRT ADQADQVCTF LFKKPGRKGA AGLRKRPACD PEHGESSSSG DEGDTVAQPP 60
RVAPRPRGLH SWQKAAHGDR RGEEAAPESL GVVYRSTRSA KPVGPEDMGA TADFEQDTEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCACGGCCG TTGGGCGCCT GAGACTCAAA CATGGCAGCG CCACCTTCTC CAGGAAGGAC 60
GGCCGACCAA GCAGACCAGG TATGCACCTT CCTCTTCAAA AAGCCTGGAC GGAAAGGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00642--zf-CCCH

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0005684--C:U2-type spliceosomal complex
GO:0008270--F:zinc ion binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0034247--P:snoRNA splicing

KEGG

ptr:467306

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003145	Amborella trichopoda	39.68	8.00e-53	200.00
IUUC-Ate-010508	Aspergillus terreus	41.85	5.00e-41	161.00
IUUC-Bol-016607	Brassica oleracea	40.63	2.00e-55	209.00
IUUC-Bra-017747	Brassica rapa	40.31	5.00e-56	211.00
IUUC-Cja-019764	Callithrix jacchus	88.68	9.00e-154	535.00
IUUC-Csa-023933	Chlorocebus sabaeus	92.79	4.00e-152	530.00
IUUC-Ggo-044612	Gorilla gorilla	98.45	2.00e-163	568.00
IUUC-Hsa-046222	Homo sapiens	99.07	2.00e-172	597.00
IUUC-Mla-058921	Melampsora laricipopulina	42.46	8.00e-36	142.00
IUUC-Nle-069057	Nomascus leucogenys	94.10	4.00e-163	566.00
IUUC-Pab-098171	Pongo abelii	96.24	1.00e-161	562.00
IUUC-Ptt-103893	Puccinia triticina	28.71	2.00e-30	125.00
IUUC-Sly-111790	Solanum lycopersicum	51.57	4.00e-44	170.00
IUUC-Uma-129339	Ustilago maydis	46.20	2.00e-48	186.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence