iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104427

Ensembl Protein ID

EDU46537

UniProt Accession

B2W2Q1; B2W2Q1_PYRTR

Genbank Protein ID

EDU46537.1

Protein Name

Histone deacetylase 4

Genbank Nucleotide ID

DS231617

Gene Name

PTRG_03699

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_03699	EDU46537	EDU46537

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/ZnF/ZnF_UBP	44.12	1.00e-80	299.00	IUUC-Hsa-046904

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MEDEDYTMGD DSIIVSTEPN GDHAPNTVVP SDIFGNSKGL MFTKHEQLPF HSPSKAPSLL 60
QPSAQKSSPG PHRTTKSPSA WSDKMSMSRP TPVRRTSPQV RIPPKPTSSA LAYATSKTGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGACG AAGACTACAC CATGGGAGAT GACTCAATCA TCGTCTCAAC AGAGCCCAAC 60
GGTGATCACG CACCGAATAC CGTTGTTCCA TCGGATATTT TTGGCAATAG CAAAGGACTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR019154--Arb2_domain
IPR000286--His_deacetylse
IPR023801--His_deacetylse_dom
IPR017321--Hist_deAcase_II_yeast

Pfam

PF09757--Arb2
PF00850--Hist_deacetyl

PRINTS

PR01270--HDASUPER

Gene Ontology

GO:0000781--C:chromosome, telomeric region
GO:0031934--C:mating-type region heterochromatin
GO:0031618--C:nuclear pericentric heterochromatin
GO:1990707--C:nuclear subtelomeric heterochromatin
GO:0030874--C:nucleolar chromatin
GO:0033553--C:rDNA heterochromatin
GO:0070824--C:SHREC complex
GO:0031078--F:histone deacetylase activity (H3-K14 specific)
GO:0030702--P:chromatin silencing at centromere
GO:0000183--P:chromatin silencing at rDNA
GO:0030466--P:chromatin silencing at silent mating-type cassette
GO:0006348--P:chromatin silencing at telomere
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0016584--P:nucleosome positioning

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000749	Aegilops tauschii	39.70	3.00e-68	251.00
IUUC-Aml-002087	Ailuropoda melanoleuca	43.58	8.00e-82	297.00
IUUC-Atr-002745	Amborella trichopoda	39.41	7.00e-75	273.00
IUUC-Apl-003250	Anas platyrhynchos	38.80	2.00e-71	262.00
IUUC-Aca-004303	Anolis carolinensis	44.39	2.00e-92	332.00
IUUC-Aly-006432	Arabidopsis lyrata	41.49	3.00e-75	274.00
IUUC-Ath-007355	Arabidopsis thaliana	41.32	5.00e-80	290.00
IUUC-Ago-007972	Ashbya gossypii	43.19	5.00e-141	493.00
IUUC-Acl-008187	Aspergillus clavatus	50.91	3.00e-173	600.00
IUUC-Afl-008399	Aspergillus flavus	52.06	1.00e-120	424.00
IUUC-Afu-008954	Aspergillus fumigatus	54.29	4.00e-113	400.00
IUUC-Ani-009142	Aspergillus nidulans	50.00	1.00e-157	548.00
IUUC-Ang-009522	Aspergillus niger	41.27	2.00e-124	437.00
IUUC-Aor-010069	Aspergillus oryzae	50.34	5.00e-162	562.00
IUUC-Ate-010291	Aspergillus terreus	46.31	4.00e-151	526.00
IUUC-Ame-010780	Astyanax mexicanus	45.38	2.00e-84	305.00
IUUC-Bgr-012073	Blumeria graminis	30.00	1.80e-01	27.30
IUUC-Bta-013052	Bos taurus	40.64	2.00e-75	276.00
IUUC-Bci-013789	Botrytis cinerea	45.37	2.00e-145	508.00
IUUC-Bdi-014007	Brachypodium distachyon	43.05	1.00e-80	292.00
IUUC-Bol-015468	Brassica oleracea	43.47	7.00e-81	293.00
IUUC-Bra-016680	Brassica rapa	43.20	1.00e-80	292.00
IUUC-Cel-018220	Caenorhabditis elegans	41.00	3.00e-73	268.00
IUUC-Cja-019473	Callithrix jacchus	43.32	7.00e-81	294.00
IUUC-Cfa-020263	Canis familiaris	43.85	9.00e-82	296.00
IUUC-Cpo-021691	Cavia porcellus	43.09	4.00e-83	301.00
IUUC-Cre-022561	Chlamydomonas reinhardtii	50.66	4.00e-53	199.00
IUUC-Csa-024223	Chlorocebus sabaeus	44.12	2.00e-82	299.00
IUUC-Csv-026359	Ciona savignyi	43.02	2.00e-57	213.00
IUUC-Cgl-026709	Colletotrichum gloeosporioides	47.11	3.00e-150	523.00
IUUC-Cne-026978	Cryptococcus neoformans	39.80	2.00e-115	407.00
IUUC-Dre-028820	Danio rerio	43.97	3.00e-86	311.00
IUUC-Dno-029160	Dasypus novemcinctus	43.01	7.00e-81	294.00
IUUC-Dor-030859	Dipodomys ordii	43.72	2.00e-87	315.00
IUUC-Dse-031186	Dothistroma septosporum	47.96	3.00e-173	600.00
IUUC-Dme-031963	Drosophila melanogaster	41.48	3.00e-84	305.00
IUUC-Ete-032279	Echinops telfairi	36.67	9.00e-63	233.00
IUUC-Eca-033842	Equus caballus	43.64	4.00e-81	295.00
IUUC-Eeu-034487	Erinaceus europaeus	47.33	1.00e-59	223.00
IUUC-Fca-036430	Felis catus	43.38	4.00e-82	298.00
IUUC-Fox-038067	Fusarium oxysporum	46.40	3.00e-150	523.00
IUUC-Fso-038263	Fusarium solani	44.87	3.00e-163	566.00
IUUC-Gmo-038473	Gadus morhua	38.74	2.00e-67	249.00
IUUC-Ggr-040062	Gaeumannomyces graminis	44.95	3.00e-148	517.00
IUUC-Gga-040501	Gallus gallus	39.90	3.00e-71	261.00
IUUC-Gac-042335	Gasterosteus aculeatus	39.80	3.00e-72	265.00
IUUC-Gma-043738	Glycine max	41.33	1.00e-74	272.00
IUUC-Ggo-045022	Gorilla gorilla	44.12	2.00e-82	299.00
IUUC-Hsa-046904	Homo sapiens	44.12	2.00e-82	298.00
IUUC-Hvu-047285	Hordeum vulgare	43.79	1.00e-76	278.00
IUUC-Itr-048484	Ictidomys tridecemlineatus	43.52	1.00e-88	320.00
IUUC-Kpa-049281	Komagataella pastoris	40.27	1.00e-144	505.00
IUUC-Lch-050330	Latimeria chalumnae	46.44	2.00e-82	298.00
IUUC-Lpe-051214	Leersia perrieri	39.79	2.00e-77	281.00
IUUC-Loc-052231	Lepisosteus oculatus	40.00	2.00e-71	262.00
IUUC-Lma-053263	Leptosphaeria maculans	74.79	0.00e+00	1063.00
IUUC-Laf-053386	Loxodonta africana	42.12	4.00e-80	291.00
IUUC-Mcc-055530	Macaca mulatta	44.12	2.00e-82	299.00
IUUC-Meu-056442	Macropus eugenii	44.39	7.00e-82	296.00
IUUC-Mor-057095	Magnaporthe oryzae	46.58	2.00e-162	564.00
IUUC-Mpo-057389	Magnaporthe poae	46.42	2.00e-152	530.00
IUUC-Mtr-058463	Medicago truncatula	41.44	1.00e-80	292.00
IUUC-Mla-059143	Melampsora laricipopulina	36.10	9.00e-95	339.00
IUUC-Mmr-060637	Microcebus murinus	44.12	9.00e-76	277.00
IUUC-Mdo-062198	Monodelphis domestica	41.71	3.00e-82	298.00
IUUC-Mmu-063346	Mus musculus	44.65	4.00e-83	301.00
IUUC-Mac-064630	Musa acuminata	41.76	5.00e-80	290.00
IUUC-Mpu-065884	Mustela putorius furo	43.11	4.00e-82	298.00
IUUC-Mlu-068117	Myotis lucifugus	41.34	8.00e-80	290.00
IUUC-Nfi-068404	Neosartorya fischeri	51.57	7.00e-175	605.00
IUUC-Ncr-068672	Neurospora crassa	46.25	1.00e-161	561.00
IUUC-Nle-069868	Nomascus leucogenys	37.88	1.00e-75	275.00
IUUC-Opr-071074	Ochotona princeps	43.20	4.00e-88	317.00
IUUC-Ont-072246	Oreochromis niloticus	44.49	2.00e-89	322.00
IUUC-Oan-073275	Ornithorhynchus anatinus	38.30	4.00e-74	271.00
IUUC-Ocu-074627	Oryctolagus cuniculus	43.47	2.00e-87	316.00
IUUC-Oba-075489	Oryza barthii	41.93	1.00e-76	279.00
IUUC-Obr-076150	Oryza brachyantha	42.82	1.00e-79	289.00
IUUC-Ogl-077437	Oryza glaberrima	40.63	6.00e-79	286.00
IUUC-Ogu-078370	Oryza glumaepatula	40.37	2.00e-78	285.00
IUUC-Oin-079210	Oryza indica	40.43	2.00e-78	285.00
IUUC-Olo-080971	Oryza longistaminata	47.74	1.00e-69	255.00
IUUC-Oni-082031	Oryza nivara	40.43	3.00e-78	284.00
IUUC-Opu-083471	Oryza punctata	41.64	1.00e-76	279.00
IUUC-Oru-084755	Oryza rufipogon	40.37	2.00e-78	285.00
IUUC-Osa-085447	Oryza sativa	40.37	2.00e-78	285.00
IUUC-Ola-087031	Oryzias latipes	38.62	2.00e-74	272.00
IUUC-Oga-089155	Otolemur garnettii	43.05	6.00e-76	277.00
IUUC-Oar-089620	Ovis aries	43.77	2.00e-77	282.00
IUUC-Ptr-090812	Pan troglodytes	38.52	2.00e-73	268.00
IUUC-Pan-092340	Papio anubis	44.12	2.00e-82	299.00
IUUC-Psi-093734	Pelodiscus sinensis	39.30	4.00e-71	261.00
IUUC-Pma-094386	Petromyzon marinus	45.33	8.00e-80	290.00
IUUC-Pno-095131	Phaeosphaeria nodorum	86.39	0.00e+00	635.00
IUUC-Ppa-095550	Physcomitrella patens	44.51	6.00e-80	290.00
IUUC-Pfo-096110	Poecilia formosa	43.80	3.00e-91	328.00
IUUC-Pab-098422	Pongo abelii	43.58	4.00e-75	275.00
IUUC-Pop-099174	Populus trichocarpa	37.50	2.00e-78	285.00
IUUC-Pca-100833	Procavia capensis	41.09	4.00e-76	278.00
IUUC-Ppe-101644	Prunus persica	42.30	1.00e-81	295.00
IUUC-Pva-102410	Pteropus vampyrus	42.86	1.00e-77	283.00
IUUC-Ptt-103841	Puccinia triticina	36.57	5.00e-98	350.00
IUUC-Pte-104383	Pyrenophora teres	94.76	0.00e+00	1367.00
IUUC-Rno-105131	Rattus norvegicus	44.92	1.00e-87	316.00
IUUC-Sce-106274	Saccharomyces cerevisiae	41.67	1.00e-131	461.00
IUUC-Sha-106661	Sarcophilus harrisii	44.38	4.00e-73	268.00
IUUC-Sja-107915	Schizosaccharomyces japonicus	46.06	7.00e-145	505.00
IUUC-Spo-108300	Schizosaccharomyces pombe	43.87	3.00e-142	497.00
IUUC-Smo-109615	Selaginella moellendorffii	43.16	1.00e-79	288.00
IUUC-Sit-110160	Setaria italica	40.79	7.00e-75	273.00
IUUC-Sly-111164	Solanum lycopersicum	40.37	2.00e-79	288.00
IUUC-Stu-112685	Solanum tuberosum	41.89	3.00e-69	254.00
IUUC-Sar-113692	Sorex araneus	36.28	5.00e-59	221.00
IUUC-Sbi-114301	Sorghum bicolor	40.58	9.00e-76	276.00
IUUC-Sre-115013	Sporisorium reilianum	36.70	1.00e-97	348.00
IUUC-Ssc-115724	Sus scrofa	38.68	7.00e-74	270.00
IUUC-Tgu-116605	Taeniopygia guttata	40.35	1.00e-72	265.00
IUUC-Tru-117614	Takifugu rubripes	47.52	2.00e-89	322.00
IUUC-Tsy-118807	Tarsius syrichta	41.60	2.00e-72	266.00
IUUC-Tni-119809	Tetraodon nigroviridis	46.84	9.00e-88	317.00
IUUC-Tca-121312	Theobroma cacao	42.34	9.00e-83	299.00
IUUC-Tre-121930	Trichoderma reesei	44.14	5.00e-160	556.00
IUUC-Tvi-122373	Trichoderma virens	43.27	4.00e-156	543.00
IUUC-Tae-123064	Triticum aestivum	37.47	4.00e-72	263.00
IUUC-Tme-127027	Tuber melanosporum	47.73	1.00e-96	345.00
IUUC-Tbe-127675	Tupaia belangeri	38.46	4.00e-24	105.00
IUUC-Ttr-128411	Tursiops truncatus	40.62	1.00e-76	279.00
IUUC-Uma-129408	Ustilago maydis	35.51	2.00e-87	315.00
IUUC-Vda-129994	Verticillium dahliae	46.74	4.00e-153	533.00
IUUC-Vpa-130525	Vicugna pacos	49.15	5.00e-13	68.20
IUUC-Vvi-131038	Vitis vinifera	41.65	5.00e-81	293.00
IUUC-Xtr-132618	Xenopus tropicalis	46.13	2.00e-90	325.00
IUUC-Xma-133730	Xiphophorus maculatus	42.38	1.00e-90	326.00
IUUC-Yli-134680	Yarrowia lipolytica	42.33	4.00e-139	486.00
IUUC-Zma-135110	Zea mays	39.84	1.00e-74	272.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence