iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__2548__AT5G25560.1	fgenesh2_kg.6__2548__AT5G25560.1	fgenesh2_kg.6__2548__AT5G25560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.60e-08	34.5	199	241

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iC+e +     d + vlpCgH++h++Cl+ +         +  CPlC
   Q: 199  CPICFEFLfesrND-VTVLPCGHTIHQKCLEEM-----RDHYQYACPLC 241
           ******88666444.999************777.....2445788**** PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGDVYFNHFA EQPQMFDQEK GEMSSNLHPH SINEDSESST LERVTAESLI NKVLGRGLME 60
HGCPHYRRRC CIRAPCCNEI FGCHHCHNEA KNNINVDQKQ RHDIPRHQVE QVICLLCGTE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGATTTTAT TCGTCGTCAG TTTCAATCGG AGATTTCTTG GTTCGGAGCT CGCGAGAATT 60
ATCGCCGGAG AATTTAGCGT CTCTGAAAAT TCTGATCGGT GAAGAATCGT CGGATCGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_489414

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000273	Aegilops tauschii	75.41	6.00e-83	300.00
IUUC-Atr-003010	Amborella trichopoda	74.17	5.00e-122	429.00
IUUC-Apl-003676	Anas platyrhynchos	51.03	2.00e-36	144.00
IUUC-Ath-006644	Arabidopsis thaliana	91.82	1.00e-165	574.00
IUUC-Bdi-014740	Brachypodium distachyon	74.90	1.00e-103	368.00
IUUC-Bol-016218	Brassica oleracea	85.06	4.00e-147	513.00
IUUC-Bra-017289	Brassica rapa	84.74	6.00e-149	519.00
IUUC-Gma-043631	Glycine max	72.12	3.00e-129	453.00
IUUC-Hvu-047668	Hordeum vulgare	74.40	5.00e-105	373.00
IUUC-Mtr-058223	Medicago truncatula	70.27	4.00e-113	400.00
IUUC-Mga-059512	Meleagris gallopavo	51.72	1.00e-32	130.00
IUUC-Mdo-062157	Monodelphis domestica	47.08	2.00e-55	207.00
IUUC-Mac-064690	Musa acuminata	69.92	7.00e-102	362.00
IUUC-Oba-075768	Oryza barthii	66.67	3.00e-114	404.00
IUUC-Obr-076899	Oryza brachyantha	67.36	3.00e-106	377.00
IUUC-Ogu-078233	Oryza glumaepatula	66.67	2.00e-113	401.00
IUUC-Oin-079289	Oryza indica	64.63	1.00e-109	389.00
IUUC-Olo-080423	Oryza longistaminata	57.55	2.00e-84	305.00
IUUC-Ome-081323	Oryza meridionalis	66.67	3.00e-114	404.00
IUUC-Oni-082322	Oryza nivara	67.01	3.00e-114	404.00
IUUC-Opu-083185	Oryza punctata	66.67	5.00e-107	380.00
IUUC-Oru-085111	Oryza rufipogon	64.97	5.00e-112	396.00
IUUC-Osa-085701	Oryza sativa	66.67	5.00e-114	402.00
IUUC-Psi-093159	Pelodiscus sinensis	48.78	1.00e-54	205.00
IUUC-Ppa-095813	Physcomitrella patens	59.32	3.00e-101	360.00
IUUC-Pop-099379	Populus trichocarpa	76.30	5.00e-135	473.00
IUUC-Smo-108873	Selaginella moellendorffii	65.46	6.00e-102	362.00
IUUC-Sit-110262	Setaria italica	74.90	1.00e-106	378.00
IUUC-Sly-111522	Solanum lycopersicum	76.10	5.00e-124	436.00
IUUC-Stu-112734	Solanum tuberosum	69.35	9.00e-126	442.00
IUUC-Sbi-113837	Sorghum bicolor	73.60	3.00e-106	377.00
IUUC-Tca-121091	Theobroma cacao	72.67	1.00e-125	441.00
IUUC-Tae-125454	Triticum aestivum	73.31	2.00e-113	401.00
IUUC-Tur-126465	Triticum urartu	73.60	3.00e-113	400.00
IUUC-Vvi-131084	Vitis vinifera	83.27	8.00e-124	435.00
IUUC-Xtr-132909	Xenopus tropicalis	46.72	1.00e-61	229.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence