iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iC+e +     d + vlpCgH++h++Cl+ +         +  CPlC
   Q: 209  CPICFEFLfesrND-VTVLPCGHTIHQKCLEEM-----RDHYQYACPLC 251
           ******88666444.999************777.....2445788**** PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGDVYFNHFA QQLQMSDQEK GEMSRHSHPH SINEESESST LERVAAESLT NKVLDRGLME 60
YGCPHYRRRC CIRAPCCNEI FGCHHCHYEA KNNINVDQKQ RHDIPRHQVE QLTRPLSSSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATCTCCTC ACCTGCAAGA GAAAAAAAAA ACTTTCATTT TATTCGTCGT CAGTTTCATC 60
TTGTTGCTTC GGAGCGAGCG AGAATTATCG TCGGAGAATT TATCGTCTCT CTCTCTGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000273	Aegilops tauschii	73.91	1.00e-82	299.00
IUUC-Atr-003010	Amborella trichopoda	72.39	1.00e-119	421.00
IUUC-Apl-003676	Anas platyrhynchos	51.03	2.00e-36	144.00
IUUC-Aly-005866	Arabidopsis lyrata	91.82	1.00e-165	574.00
IUUC-Bdi-014740	Brachypodium distachyon	71.37	4.00e-103	367.00
IUUC-Bol-016218	Brassica oleracea	81.45	6.00e-143	499.00
IUUC-Bra-017289	Brassica rapa	82.08	8.00e-147	511.00
IUUC-Ete-032847	Echinops telfairi	52.13	2.00e-25	108.00
IUUC-Gma-043631	Glycine max	74.48	5.00e-126	442.00
IUUC-Hvu-047668	Hordeum vulgare	61.27	1.00e-102	365.00
IUUC-Mtr-058223	Medicago truncatula	68.03	1.00e-111	394.00
IUUC-Mga-059512	Meleagris gallopavo	51.72	1.00e-32	130.00
IUUC-Mac-064690	Musa acuminata	67.28	3.00e-98	350.00
IUUC-Oba-075768	Oryza barthii	61.81	3.00e-111	394.00
IUUC-Obr-076899	Oryza brachyantha	67.26	2.00e-103	367.00
IUUC-Ogu-078233	Oryza glumaepatula	61.81	2.00e-110	392.00
IUUC-Oin-079289	Oryza indica	59.68	3.00e-106	377.00
IUUC-Olo-080423	Oryza longistaminata	51.47	1.00e-81	296.00
IUUC-Ome-081323	Oryza meridionalis	61.81	1.00e-111	395.00
IUUC-Oni-082322	Oryza nivara	62.21	2.00e-111	394.00
IUUC-Opu-083185	Oryza punctata	62.38	9.00e-105	372.00
IUUC-Oru-085111	Oryza rufipogon	60.13	2.00e-109	387.00
IUUC-Osa-085701	Oryza sativa	61.81	3.00e-111	394.00
IUUC-Psi-093159	Pelodiscus sinensis	48.99	3.00e-53	200.00
IUUC-Pop-099379	Populus trichocarpa	73.90	5.00e-134	469.00
IUUC-Sit-110262	Setaria italica	70.72	5.00e-104	369.00
IUUC-Sly-111522	Solanum lycopersicum	73.05	6.00e-122	429.00
IUUC-Stu-112734	Solanum tuberosum	75.74	1.00e-123	435.00
IUUC-Sbi-113837	Sorghum bicolor	69.20	2.00e-103	367.00
IUUC-Tca-121091	Theobroma cacao	69.78	6.00e-124	436.00
IUUC-Tae-125789	Triticum aestivum	69.96	2.00e-111	394.00
IUUC-Tur-126465	Triticum urartu	60.44	5.00e-111	393.00
IUUC-Vvi-131084	Vitis vinifera	77.66	3.00e-121	427.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence