iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099379

UUCD1 version

UUC-PoT-01366

Ensembl Protein ID

POPTR_0006s26180.1

UniProt Accession

A9PE71; A9PE71_POPTR

Genbank Protein ID

ABK94674.1; EEE93103.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

EF146617; CM000342

Gene Name

POPTRDRAFT_654056; POPTR_0006s26180g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s26180	POPTR_0006s26180.1	POPTR_0006s26180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.10e-07	31.5	191	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++C+e +   ++ + vlpCgH++h++Cl+ +         +  CPlC
   Q: 191  CPVCFEFLfesRYDVTVLPCGHTIHESCLKEM-----RDHYQYACPLC 233
           ******99454333889************777.....3455788**** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAEVDIKSFD PQEFRLFQQM GSCSQHFNED FIFSEESMNV ETPQILDKGL MEYGCLHYRR 60
RCRIRAPCCN EVFDCRHCHN EAKNNINVDQ KHRHDMPRHE VKQVICSLCG TEQEVQQVCI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGTGTGATG TATTGCTTTT ACCATAGGTT GCCATGTCCA GAGTAACTGG ACTTTGGTTC 60
TGGGACTTCT TCAAGGAATC GAGTGATCAT GCAATGCTAT TCTTACTAAT GGCTGAAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0006s26180g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000273	Aegilops tauschii	75.96	1.00e-82	299.00
IUUC-Atr-003010	Amborella trichopoda	77.78	2.00e-126	444.00
IUUC-Apl-003676	Anas platyrhynchos	50.34	3.00e-35	140.00
IUUC-Aly-005866	Arabidopsis lyrata	76.30	7.00e-128	449.00
IUUC-Ath-006644	Arabidopsis thaliana	73.90	1.00e-126	445.00
IUUC-Bdi-014740	Brachypodium distachyon	74.81	3.00e-109	387.00
IUUC-Bol-016218	Brassica oleracea	84.65	1.00e-129	455.00
IUUC-Bra-017289	Brassica rapa	83.86	7.00e-128	449.00
IUUC-Fal-036768	Ficedula albicollis	47.03	1.00e-52	199.00
IUUC-Gga-040156	Gallus gallus	48.96	7.00e-63	233.00
IUUC-Gma-044115	Glycine max	73.79	2.00e-134	471.00
IUUC-Hvu-047668	Hordeum vulgare	67.00	3.00e-110	390.00
IUUC-Mtr-058223	Medicago truncatula	75.48	7.00e-123	432.00
IUUC-Mga-059512	Meleagris gallopavo	50.86	1.00e-31	127.00
IUUC-Mdo-062157	Monodelphis domestica	47.68	5.00e-55	206.00
IUUC-Mac-064690	Musa acuminata	75.10	1.00e-105	375.00
IUUC-Mlu-067798	Myotis lucifugus	43.90	8.00e-53	199.00
IUUC-Oba-075768	Oryza barthii	73.28	3.00e-117	414.00
IUUC-Obr-076899	Oryza brachyantha	76.38	1.00e-109	388.00
IUUC-Ogu-078233	Oryza glumaepatula	73.28	2.00e-116	412.00
IUUC-Oin-079289	Oryza indica	70.52	3.00e-112	397.00
IUUC-Ome-081323	Oryza meridionalis	73.28	2.00e-117	414.00
IUUC-Oni-082322	Oryza nivara	73.28	9.00e-117	413.00
IUUC-Opu-083185	Oryza punctata	73.76	5.00e-110	390.00
IUUC-Oru-085111	Oryza rufipogon	71.27	4.00e-115	407.00
IUUC-Osa-085701	Oryza sativa	73.28	3.00e-117	414.00
IUUC-Psi-093159	Pelodiscus sinensis	50.50	6.00e-55	206.00
IUUC-Ppa-095813	Physcomitrella patens	61.09	6.00e-106	376.00
IUUC-Sha-106745	Sarcophilus harrisii	47.01	8.00e-53	199.00
IUUC-Sit-110262	Setaria italica	73.76	1.00e-109	388.00
IUUC-Sly-111522	Solanum lycopersicum	77.34	1.00e-127	448.00
IUUC-Stu-112734	Solanum tuberosum	79.14	7.00e-130	456.00
IUUC-Sbi-113837	Sorghum bicolor	72.69	8.00e-110	389.00
IUUC-Tgu-116992	Taeniopygia guttata	49.59	3.00e-60	224.00
IUUC-Tca-121091	Theobroma cacao	78.06	3.00e-135	473.00
IUUC-Tae-125378	Triticum aestivum	76.59	6.00e-118	416.00
IUUC-Tur-126465	Triticum urartu	75.49	7.00e-118	416.00
IUUC-Vpa-130311	Vicugna pacos	45.49	8.00e-55	206.00
IUUC-Vvi-131084	Vitis vinifera	79.58	1.00e-129	454.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence