iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g033040	Sb03g033040.1	Sb03g033040.1
Sb03g033040	Sb03g033040.6	Sb03g033040.6
Sb03g033040	Sb03g033040.7	Sb03g033040.7

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-07	31.2	197	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iC+e +     d + vlpCgH++h +Cl+ +     ++  +f CPlC
   Q: 197  CPICFEYLfestND-VSVLPCGHTIHVKCLKEM-----EEHCQFACPLC 239
           ******99666444.999************888.....689999***** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGALDLHLEF ASAQHGQAKL NVEEYAKGSL LSDGNYNTEK INGSNPDEYE KFQKGIMQYG 60
CPHYRRRCRI RAPCCNEVFD CRHCHNETKN SIKIDKMKRH ELPRHEVQQV VCSLCGTEQE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATCGCAGT CACTGCTCTG AAGTCCGAAC CCCTTCATAC CCATCGTCTC GTCTCCGATT 60
TCCCCAAATT CAGGCCGCAG GCGCTACAGG ATCCAGGCAC CACGCGGTCG GCGGCTGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000273	Aegilops tauschii	62.61	5.00e-107	379.00
IUUC-Atr-003010	Amborella trichopoda	67.24	5.00e-117	413.00
IUUC-Aly-005866	Arabidopsis lyrata	73.31	2.00e-106	377.00
IUUC-Ath-006644	Arabidopsis thaliana	69.20	1.00e-103	368.00
IUUC-Bdi-014740	Brachypodium distachyon	83.17	4.00e-141	493.00
IUUC-Bol-016218	Brassica oleracea	72.51	5.00e-112	396.00
IUUC-Bra-017289	Brassica rapa	71.31	2.00e-109	387.00
IUUC-Gma-043434	Glycine max	76.59	6.00e-117	412.00
IUUC-Hvu-047668	Hordeum vulgare	81.46	8.00e-139	485.00
IUUC-Mtr-058223	Medicago truncatula	68.92	1.00e-107	381.00
IUUC-Mac-064690	Musa acuminata	69.10	9.00e-105	372.00
IUUC-Oba-075768	Oryza barthii	86.09	2.00e-158	550.00
IUUC-Obr-076899	Oryza brachyantha	84.11	4.00e-145	506.00
IUUC-Ogu-078233	Oryza glumaepatula	86.09	8.00e-158	549.00
IUUC-Oin-079289	Oryza indica	83.28	3.00e-151	526.00
IUUC-Olo-080423	Oryza longistaminata	69.65	2.00e-122	432.00
IUUC-Ome-081323	Oryza meridionalis	86.42	5.00e-159	552.00
IUUC-Oni-082322	Oryza nivara	85.76	3.00e-157	547.00
IUUC-Opu-083185	Oryza punctata	86.09	1.00e-149	521.00
IUUC-Oru-085111	Oryza rufipogon	84.09	7.00e-156	542.00
IUUC-Osa-085701	Oryza sativa	86.09	3.00e-158	550.00
IUUC-Ppa-095813	Physcomitrella patens	63.16	5.00e-97	346.00
IUUC-Pop-099379	Populus trichocarpa	72.43	2.00e-117	414.00
IUUC-Smo-108873	Selaginella moellendorffii	64.92	1.00e-100	358.00
IUUC-Sit-110262	Setaria italica	92.72	7.00e-160	555.00
IUUC-Sly-111522	Solanum lycopersicum	64.21	3.00e-113	400.00
IUUC-Stu-112734	Solanum tuberosum	64.38	6.00e-115	405.00
IUUC-Tca-121091	Theobroma cacao	65.54	2.00e-107	380.00
IUUC-Tae-125454	Triticum aestivum	85.45	2.00e-142	497.00
IUUC-Tur-126465	Triticum urartu	82.12	5.00e-148	515.00
IUUC-Tbe-127598	Tupaia belangeri	44.44	9.00e-20	89.40
IUUC-Vvi-131084	Vitis vinifera	77.73	4.00e-114	403.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence