iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114056

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G179800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g023140	Sb10g023140.1	Sb10g023140.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	38.87	1.00e-50	197.00	IUUC-Ath-006894

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGELIPGLPE EVARECLVRV GFDQLPVVRR ISRQWKSEVE SPDYHRQRRA EGLARPVLAL 60
VQAQPTAPPA DDAGPVADKH STAAAAGSGG GPANSYRMVL LDPVEGRWAP LPPLPGPSES 120

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Nucleotide Sequence
(Fasta)

CTCACATAAA CACATCAACA CACAAAGCAC AGCTCTCTGA GAAGCCACTC GTTTCCTGCT 60
CGAATCAAGC ACAGCTCTCT GCGTTTCGAT CGATACAGCA GAAACGGCCA CACGAATCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller
IPR006652--Kelch_1
IPR015943--WD40/YVTN_repeat-like_dom

Pfam

PF00646--F-box
PF01344--Kelch_1

SMART

SM00612--Kelch

Gene Ontology

GO:0005737--C:cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030162--P:regulation of proteolysis

KEGG

sbi:SORBI_10g023140

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002518	Amborella trichopoda	36.62	7.00e-64	236.00
IUUC-Aly-006080	Arabidopsis lyrata	38.76	1.00e-65	242.00
IUUC-Ath-006894	Arabidopsis thaliana	39.39	1.00e-65	242.00
IUUC-Afl-008600	Aspergillus flavus	38.24	1.00e-01	30.80
IUUC-Ate-010500	Aspergillus terreus	33.33	4.00e-11	61.60
IUUC-Bdi-014921	Brachypodium distachyon	79.12	3.00e-154	536.00
IUUC-Bol-015687	Brassica oleracea	38.60	2.00e-68	251.00
IUUC-Bra-016909	Brassica rapa	40.05	3.00e-70	258.00
IUUC-Gma-042989	Glycine max	43.12	3.00e-79	287.00
IUUC-Hvu-047097	Hordeum vulgare	79.12	4.00e-148	516.00
IUUC-Lpe-050853	Leersia perrieri	72.49	3.00e-131	460.00
IUUC-Mor-057181	Magnaporthe oryzae	30.51	1.00e-09	56.60
IUUC-Mtr-058274	Medicago truncatula	42.08	6.00e-70	256.00
IUUC-Mac-065270	Musa acuminata	47.56	2.00e-90	324.00
IUUC-Oba-075850	Oryza barthii	78.28	2.00e-63	234.00
IUUC-Obr-076711	Oryza brachyantha	75.80	4.00e-87	312.00
IUUC-Ogl-077502	Oryza glaberrima	76.86	2.00e-133	467.00
IUUC-Ogu-078360	Oryza glumaepatula	62.92	9.00e-105	372.00
IUUC-Oin-079816	Oryza indica	76.61	2.00e-132	464.00
IUUC-Ome-081176	Oryza meridionalis	76.67	3.00e-145	507.00
IUUC-Oni-082714	Oryza nivara	76.86	2.00e-133	467.00
IUUC-Opu-083272	Oryza punctata	76.41	1.00e-147	515.00
IUUC-Oru-084247	Oryza rufipogon	77.18	4.00e-139	486.00
IUUC-Osa-085360	Oryza sativa	76.86	2.00e-133	467.00
IUUC-Ppa-095543	Physcomitrella patens	33.59	6.00e-51	193.00
IUUC-Pop-099836	Populus trichocarpa	43.08	2.00e-76	278.00
IUUC-Ppe-101539	Prunus persica	40.36	2.00e-76	278.00
IUUC-Pyt-104553	Pyrenophora triticirepentis	22.97	6.00e-03	35.00
IUUC-Ssl-108512	Sclerotinia sclerotiorum	27.87	4.90e+00	25.80
IUUC-Smo-109140	Selaginella moellendorffii	40.00	1.00e-50	192.00
IUUC-Sit-110557	Setaria italica	60.93	2.00e-91	328.00
IUUC-Sly-110913	Solanum lycopersicum	41.82	3.00e-74	270.00
IUUC-Stu-112061	Solanum tuberosum	42.34	2.00e-74	271.00
IUUC-Tca-121805	Theobroma cacao	41.71	2.00e-73	268.00
IUUC-Tae-125904	Triticum aestivum	79.74	1.00e-142	498.00
IUUC-Vvi-130895	Vitis vinifera	44.30	5.00e-77	280.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence