iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131364

UUCD1 version

UUC-ViV-00819

Ensembl Protein ID

VIT_07s0129g00590.t01

UniProt Accession

F6HSV9; F6HSV9_VITVI

Genbank Protein ID

CCB57769.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN596246

Gene Name

VIT_07s0129g00590

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_07s0129g00590	VIT_07s0129g00590.t01	VIT_07s0129g00590.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.20e-31	106.6	275	347

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM+dPv+++sG+ty+r+ I+kwl+ g + cP+trq+l++++l+Pn+t+++li +wce+n++
   Q: 275  IPADFCCPLSLELMTDPVIVASGQTYERAFIRKWLDLGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNV 347
           8********************************************************************9986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGLVCGCSKD CIPMVRFVPQ DQQCEKDYFG VYVEKWRRLM EISLLKRLLN KISSFFLLSS 60
HDNIDSEPVR KYYQKIEEIL KLLKPILSTI IDSEIASDEL LNKAFEELGR SVDDLQELFE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTCTTG TTTGTGGATG TTCAAAAGAC TGCATTCCTA TGGTTCGATT TGTTCCTCAG 60
GATCAGCAAT GTGAGAAAGA TTACTTTGGT GTCTGAATTT CAGGTTTATG TTGAGAAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000760	Aegilops tauschii	48.65	0.00e+00	656.00
IUUC-Atr-002793	Amborella trichopoda	57.09	0.00e+00	860.00
IUUC-Aly-006261	Arabidopsis lyrata	59.73	0.00e+00	891.00
IUUC-Ath-006925	Arabidopsis thaliana	59.24	0.00e+00	887.00
IUUC-Bdi-014197	Brachypodium distachyon	52.33	0.00e+00	706.00
IUUC-Bol-015762	Brassica oleracea	56.06	0.00e+00	805.00
IUUC-Gma-044275	Glycine max	66.83	0.00e+00	1040.00
IUUC-Hvu-047089	Hordeum vulgare	52.61	0.00e+00	738.00
IUUC-Lpe-051326	Leersia perrieri	53.36	0.00e+00	710.00
IUUC-Mtr-057910	Medicago truncatula	66.67	0.00e+00	1012.00
IUUC-Mac-064791	Musa acuminata	76.66	2.00e-132	464.00
IUUC-Oba-075484	Oryza barthii	54.60	0.00e+00	681.00
IUUC-Obr-076317	Oryza brachyantha	53.70	0.00e+00	677.00
IUUC-Ogl-077857	Oryza glaberrima	54.64	0.00e+00	680.00
IUUC-Ogu-078826	Oryza glumaepatula	54.05	0.00e+00	678.00
IUUC-Oin-079538	Oryza indica	53.85	0.00e+00	680.00
IUUC-Olo-080425	Oryza longistaminata	53.67	0.00e+00	664.00
IUUC-Ome-081524	Oryza meridionalis	53.91	0.00e+00	678.00
IUUC-Oni-082077	Oryza nivara	54.05	0.00e+00	676.00
IUUC-Opu-083165	Oryza punctata	54.01	0.00e+00	688.00
IUUC-Oru-085180	Oryza rufipogon	53.58	0.00e+00	693.00
IUUC-Osa-085315	Oryza sativa	54.14	0.00e+00	688.00
IUUC-Ppa-095860	Physcomitrella patens	66.87	5.00e-112	397.00
IUUC-Pop-099220	Populus trichocarpa	71.91	0.00e+00	823.00
IUUC-Ptt-103922	Puccinia triticina	32.14	3.00e-09	55.10
IUUC-Smo-108813	Selaginella moellendorffii	61.13	1.00e-84	306.00
IUUC-Sit-110349	Setaria italica	54.02	0.00e+00	726.00
IUUC-Sly-111082	Solanum lycopersicum	65.57	0.00e+00	970.00
IUUC-Stu-112751	Solanum tuberosum	65.64	0.00e+00	986.00
IUUC-Sbi-114085	Sorghum bicolor	53.08	0.00e+00	713.00
IUUC-Tca-121129	Theobroma cacao	73.33	0.00e+00	1160.00
IUUC-Tae-125641	Triticum aestivum	51.49	0.00e+00	721.00
IUUC-Tur-126525	Triticum urartu	46.08	0.00e+00	636.00
IUUC-Xtr-132376	Xenopus tropicalis	26.72	1.00e-10	62.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence