iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131555

Ensembl Protein ID

VIT_12s0028g03140.t01

UniProt Accession

E0CTI3; E0CTI3_VITVI

Genbank Protein ID

CBI21898.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595235

Gene Name

VIT_12s0028g03140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_12s0028g03140	VIT_12s0028g03140.t01	VIT_12s0028g03140.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-24	84.0	107	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++ v++l   +d ++lvs++ D+t+++W++
   Q: 107  GHQGAVRGLTAsTDgRILVSCGTDCTVRLWNV 138
           8*******988888899**************7 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MKVKVISRST DEFTRERSQD LQRVFRNFDP NLRKQEKAVE YVRALNAAKL DKVFARPFIG 60
AMDGHIDSIS CMAKNPNYLK GIFSGSMDGD IRLWDIASRR TVCQFPGHQG AVRGLTASTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCGTCTCT CACCCTAGGG TTTTTCACAG ACCATGAGAA GCTACAGAGG AAGTCCAGAC 60
AAACGTAATT GCGATTGAGC GTTCTCTTCT TTCTCCATCT GGGGTTCTCC CTATTTAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

vvi:100260774

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	46.46	1.00e-127	449.00
IUUC-Atr-002799	Amborella trichopoda	79.20	0.00e+00	761.00
IUUC-Apl-003675	Anas platyrhynchos	46.10	3.00e-122	431.00
IUUC-Aca-004792	Anolis carolinensis	47.79	4.00e-132	463.00
IUUC-Aly-005998	Arabidopsis lyrata	81.86	0.00e+00	798.00
IUUC-Ath-007526	Arabidopsis thaliana	80.31	0.00e+00	785.00
IUUC-Ago-007774	Ashbya gossypii	45.49	8.00e-117	412.00
IUUC-Acl-008024	Aspergillus clavatus	44.30	2.00e-110	391.00
IUUC-Afu-008930	Aspergillus fumigatus	43.04	2.00e-105	375.00
IUUC-Ani-009370	Aspergillus nidulans	43.49	5.00e-108	383.00
IUUC-Ang-009827	Aspergillus niger	45.77	7.00e-109	386.00
IUUC-Aor-010060	Aspergillus oryzae	42.58	2.00e-101	361.00
IUUC-Ate-010434	Aspergillus terreus	47.28	3.00e-95	340.00
IUUC-Ame-011967	Astyanax mexicanus	46.85	2.00e-122	431.00
IUUC-Bgr-011989	Blumeria graminis	43.81	2.00e-105	375.00
IUUC-Bta-013291	Bos taurus	35.04	3.00e-79	288.00
IUUC-Bci-013868	Botrytis cinerea	42.43	5.00e-103	367.00
IUUC-Bdi-014343	Brachypodium distachyon	78.10	0.00e+00	743.00
IUUC-Bol-015740	Brassica oleracea	78.32	0.00e+00	729.00
IUUC-Bra-016689	Brassica rapa	78.10	0.00e+00	723.00
IUUC-Cel-018536	Caenorhabditis elegans	37.62	2.00e-92	332.00
IUUC-Cja-018779	Callithrix jacchus	46.90	2.00e-130	457.00
IUUC-Cfa-020105	Canis familiaris	47.57	2.00e-132	464.00
IUUC-Cpo-021538	Cavia porcellus	46.90	8.00e-127	446.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	65.64	3.00e-64	236.00
IUUC-Csa-023492	Chlorocebus sabaeus	47.12	7.00e-131	459.00
IUUC-Cho-024497	Choloepus hoffmanni	42.62	5.00e-74	270.00
IUUC-Cin-025524	Ciona intestinalis	48.44	4.00e-132	463.00
IUUC-Csv-026197	Ciona savignyi	47.66	7.00e-130	456.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	42.14	1.00e-95	342.00
IUUC-Cne-026840	Cryptococcus neoformans	33.20	1.00e-69	257.00
IUUC-Cme-027111	Cyanidioschyzon merolae	35.19	2.00e-75	275.00
IUUC-Dre-027471	Danio rerio	48.28	6.00e-128	449.00
IUUC-Dno-029790	Dasypus novemcinctus	47.21	2.00e-102	365.00
IUUC-Dor-030971	Dipodomys ordii	37.39	2.00e-91	329.00
IUUC-Dse-031563	Dothistroma septosporum	43.61	1.00e-104	372.00
IUUC-Dme-032161	Drosophila melanogaster	45.37	6.00e-118	416.00
IUUC-Ete-033127	Echinops telfairi	44.93	2.00e-119	422.00
IUUC-Eca-033531	Equus caballus	46.40	5.00e-122	430.00
IUUC-Eeu-034663	Erinaceus europaeus	42.73	4.00e-108	384.00
IUUC-Fca-036258	Felis catus	47.35	1.00e-131	461.00
IUUC-Fal-037456	Ficedula albicollis	47.35	1.00e-126	445.00
IUUC-Fox-038025	Fusarium oxysporum	41.23	6.00e-97	347.00
IUUC-Fso-038344	Fusarium solani	41.06	3.00e-92	330.00
IUUC-Gmo-039643	Gadus morhua	46.68	3.00e-127	447.00
IUUC-Ggr-039816	Gaeumannomyces graminis	42.56	8.00e-97	346.00
IUUC-Gga-040143	Gallus gallus	48.01	7.00e-129	452.00
IUUC-Gac-041665	Gasterosteus aculeatus	48.05	5.00e-131	460.00
IUUC-Gma-043073	Glycine max	82.74	0.00e+00	795.00
IUUC-Ggo-045058	Gorilla gorilla	46.90	3.00e-130	457.00
IUUC-Hsa-046843	Homo sapiens	46.68	1.00e-129	455.00
IUUC-Hvu-047654	Hordeum vulgare	75.08	4.00e-127	446.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	46.68	5.00e-130	456.00
IUUC-Kpa-049232	Komagataella pastoris	42.01	3.00e-117	414.00
IUUC-Lch-050542	Latimeria chalumnae	45.26	7.00e-131	459.00
IUUC-Lpe-051622	Leersia perrieri	80.53	0.00e+00	764.00
IUUC-Loc-052674	Lepisosteus oculatus	47.03	4.00e-133	467.00
IUUC-Lma-053108	Leptosphaeria maculans	42.83	1.00e-103	369.00
IUUC-Laf-053385	Loxodonta africana	46.24	8.00e-127	446.00
IUUC-Mcc-055151	Macaca mulatta	47.12	1.00e-130	458.00
IUUC-Meu-056230	Macropus eugenii	40.74	3.00e-52	198.00
IUUC-Mor-057013	Magnaporthe oryzae	40.73	2.00e-93	335.00
IUUC-Mpo-057530	Magnaporthe poae	42.79	2.00e-97	348.00
IUUC-Mtr-058187	Medicago truncatula	81.19	0.00e+00	768.00
IUUC-Mla-058964	Melampsora laricipopulina	36.68	2.00e-87	315.00
IUUC-Mga-059712	Meleagris gallopavo	46.99	1.00e-120	425.00
IUUC-Mvi-060370	Microbotryum violaceum	42.06	8.00e-73	266.00
IUUC-Mmr-061340	Microcebus murinus	44.69	1.00e-120	426.00
IUUC-Mdo-062978	Monodelphis domestica	47.12	3.00e-130	457.00
IUUC-Mmu-063439	Mus musculus	47.12	3.00e-132	464.00
IUUC-Mac-065129	Musa acuminata	82.08	0.00e+00	804.00
IUUC-Mpu-066548	Mustela putorius furo	42.20	2.00e-96	345.00
IUUC-Mlu-067660	Myotis lucifugus	46.46	8.00e-130	456.00
IUUC-Nfi-068455	Neosartorya fischeri	44.44	1.00e-108	385.00
IUUC-Ncr-068848	Neurospora crassa	41.36	6.00e-99	353.00
IUUC-Nle-069923	Nomascus leucogenys	46.90	5.00e-130	457.00
IUUC-Opr-070279	Ochotona princeps	41.98	5.00e-37	147.00
IUUC-Ont-072234	Oreochromis niloticus	47.32	9.00e-133	466.00
IUUC-Oan-073713	Ornithorhynchus anatinus	39.60	9.00e-44	168.00
IUUC-Ocu-073782	Oryctolagus cuniculus	47.12	5.00e-131	460.00
IUUC-Oba-075161	Oryza barthii	80.75	0.00e+00	769.00
IUUC-Obr-076868	Oryza brachyantha	80.53	0.00e+00	767.00
IUUC-Ogl-077062	Oryza glaberrima	80.75	0.00e+00	769.00
IUUC-Ogu-078308	Oryza glumaepatula	80.75	0.00e+00	768.00
IUUC-Oin-079378	Oryza indica	80.75	0.00e+00	768.00
IUUC-Olo-080638	Oryza longistaminata	77.65	0.00e+00	728.00
IUUC-Oni-082368	Oryza nivara	80.75	0.00e+00	768.00
IUUC-Opu-083628	Oryza punctata	80.75	0.00e+00	768.00
IUUC-Oru-085226	Oryza rufipogon	80.53	0.00e+00	766.00
IUUC-Osa-085368	Oryza sativa	76.38	2.00e-129	454.00
IUUC-Ola-086836	Oryzias latipes	46.68	3.00e-131	461.00
IUUC-Olu-087755	Ostreococcus lucimarinus	56.29	2.00e-150	525.00
IUUC-Oga-088170	Otolemur garnettii	46.90	7.00e-131	459.00
IUUC-Oar-089388	Ovis aries	47.12	3.00e-131	461.00
IUUC-Ptr-090494	Pan troglodytes	46.90	6.00e-130	456.00
IUUC-Pan-091697	Papio anubis	47.12	9.00e-131	459.00
IUUC-Psi-093916	Pelodiscus sinensis	46.46	5.00e-124	436.00
IUUC-Pno-095004	Phaeosphaeria nodorum	41.28	4.00e-96	343.00
IUUC-Ppa-095514	Physcomitrella patens	67.26	0.00e+00	673.00
IUUC-Pfo-097432	Poecilia formosa	49.20	3.00e-130	457.00
IUUC-Pab-098423	Pongo abelii	47.12	7.00e-131	459.00
IUUC-Pop-099649	Populus trichocarpa	88.05	0.00e+00	842.00
IUUC-Pca-100365	Procavia capensis	45.35	1.00e-121	429.00
IUUC-Ppe-101379	Prunus persica	81.51	0.00e+00	778.00
IUUC-Pva-102845	Pteropus vampyrus	47.79	1.00e-128	452.00
IUUC-Pgr-103469	Puccinia graminis	37.61	3.00e-66	245.00
IUUC-Ptt-103980	Puccinia triticina	37.13	1.00e-64	239.00
IUUC-Pte-104111	Pyrenophora teres	42.60	5.00e-99	353.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	42.38	3.00e-99	354.00
IUUC-Rno-105082	Rattus norvegicus	47.12	2.00e-131	461.00
IUUC-Sce-106340	Saccharomyces cerevisiae	43.38	5.00e-113	400.00
IUUC-Sha-106584	Sarcophilus harrisii	46.90	6.00e-130	456.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	44.99	8.00e-106	376.00
IUUC-Spo-108046	Schizosaccharomyces pombe	45.88	3.00e-112	397.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	42.20	3.00e-102	364.00
IUUC-Smo-109548	Selaginella moellendorffii	65.71	0.00e+00	654.00
IUUC-Sit-110242	Setaria italica	78.76	0.00e+00	747.00
IUUC-Sly-111762	Solanum lycopersicum	82.30	0.00e+00	781.00
IUUC-Stu-112156	Solanum tuberosum	82.74	0.00e+00	785.00
IUUC-Sbi-114104	Sorghum bicolor	78.10	0.00e+00	743.00
IUUC-Sre-114951	Sporisorium reilianum	40.92	2.00e-107	381.00
IUUC-Ssc-115510	Sus scrofa	47.12	1.00e-130	458.00
IUUC-Tgu-117234	Taeniopygia guttata	47.09	3.00e-118	417.00
IUUC-Tru-117986	Takifugu rubripes	46.27	2.00e-126	445.00
IUUC-Tsy-119252	Tarsius syrichta	46.90	5.00e-120	423.00
IUUC-Tni-119785	Tetraodon nigroviridis	48.36	6.00e-125	440.00
IUUC-Tca-121222	Theobroma cacao	88.05	0.00e+00	811.00
IUUC-Tre-122243	Trichoderma reesei	40.50	7.00e-96	343.00
IUUC-Tvi-122293	Trichoderma virens	41.82	4.00e-97	347.00
IUUC-Tae-125191	Triticum aestivum	76.55	0.00e+00	727.00
IUUC-Tur-126098	Triticum urartu	73.33	0.00e+00	665.00
IUUC-Tme-127200	Tuber melanosporum	48.90	1.00e-125	442.00
IUUC-Tbe-127568	Tupaia belangeri	42.92	2.00e-56	212.00
IUUC-Ttr-129185	Tursiops truncatus	42.26	3.00e-108	385.00
IUUC-Uma-129353	Ustilago maydis	41.75	9.00e-108	382.00
IUUC-Vda-129768	Verticillium dahliae	41.23	4.00e-93	333.00
IUUC-Vpa-130572	Vicugna pacos	47.12	1.00e-129	456.00
IUUC-Xtr-132263	Xenopus tropicalis	46.90	9.00e-106	375.00
IUUC-Xma-133925	Xiphophorus maculatus	49.20	4.00e-130	457.00
IUUC-Yli-134384	Yarrowia lipolytica	45.75	3.00e-114	404.00
IUUC-Zma-135616	Zea mays	77.88	0.00e+00	739.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence