iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
CPLM	dbPAF	dbPTM	PHOSIDA
BioGRID
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
UBD/Alpha-Helix/GAT	GAT	15651983
UBD/Alpha-Helix/VHS	VHS	15651983

Classification

Family	E-value	Score	Start	End
UBD/Alpha-Helix/GAT	2.10e-19	68.3	193	296

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/GAT

   S: 19   DLreAnkLikelvkededkaekikkliseleevksnvkllnemlselspegeepednellqelyetckaarpkllklieeeedndellaellkanDelnqvl 120
            L  A++L ++     +++a +i+ +is  ++++s+v+l+n+++    p+g++++d+e++++++ +++a+r+k+l++++  ++++e+l++l++anDel+++l
   Q: 193  SLTSADRLYRIPQINMNKEAPRIRLIIS--DALASAVSLQNSLIG--LPKGKFSTDDEEATSKFIQARAIRRKVLRYLQL-VTEGEFLGSLIHANDELVAAL 289
           577888888888888899999*******..***************..*********************************.********************* PP
   S: 121  nkykqlk 127
           ++y++++
   Q: 290  TAYDDRS 296
           ***9875 PP

Organism

Saccharomyces cerevisiae

Functional Description
(View)

Essential for the organization of the actin cytoskeleton, fluid phase endocytosis and vesicle trafficking, together with YSC84.

Protein Sequence
(Fasta)

MGFLSDHPHT AITETIFRIV SSRDYTLEVE LAPLIQLIKA DHNDYNYTVN QEEAARALRK 60
KIKYGNRLQQ SRTLDLLDLF ISQGVKFTVM YNDDKLLQRL RGMATNSENS GSGEKYEPRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGTTTC TTTCGGATCA TCCGCATACA GCTATCACCG AGACGATCTT TCGAATTGTC 60
TCTTCAAGGG ACTATACGCT AGAAGTGGAG TTAGCTCCCT TGATTCAGCT TATCAAAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0254--Endocytosis
KW-1185--Reference proteome

Interpro

IPR008942--ENTH_VHS
IPR004152--GAT_dom

Gene Ontology

GO:0030479--C:actin cortical patch
GO:0005938--C:cell cortex
GO:0005737--C:cytoplasm
GO:0051666--P:actin cortical patch localization
GO:0030036--P:actin cytoskeleton organization
GO:0007015--P:actin filament organization
GO:0006897--P:endocytosis

KEGG

sce:YCL034W

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007791	Ashbya gossypii	48.64	6.00e-68	248.00
IUUC-Acl-008128	Aspergillus clavatus	27.44	3.00e-20	90.50
IUUC-Afl-008575	Aspergillus flavus	28.16	4.00e-22	96.70
IUUC-Afu-009036	Aspergillus fumigatus	26.71	4.00e-20	90.50
IUUC-Ani-009392	Aspergillus nidulans	28.57	6.00e-22	97.10
IUUC-Ang-009567	Aspergillus niger	37.08	4.00e-12	63.50
IUUC-Aor-009900	Aspergillus oryzae	28.16	4.00e-22	96.70
IUUC-Ate-010539	Aspergillus terreus	26.67	3.00e-18	84.00
IUUC-Bgr-012149	Blumeria graminis	26.73	8.00e-18	82.80
IUUC-Bci-013749	Botrytis cinerea	34.09	3.00e-10	57.80
IUUC-Cho-024984	Choloepus hoffmanni	25.26	9.10e-02	28.90
IUUC-Cgl-026633	Colletotrichum gloeosporioides	24.56	6.00e-18	83.20
IUUC-Cne-026776	Cryptococcus neoformans	31.18	2.00e-08	52.40
IUUC-Dno-029391	Dasypus novemcinctus	34.38	9.10e-01	26.60
IUUC-Dse-031173	Dothistroma septosporum	34.27	4.00e-11	60.50
IUUC-Fal-037581	Ficedula albicollis	29.35	5.00e-03	33.50
IUUC-Fox-037942	Fusarium oxysporum	34.83	2.00e-11	61.60
IUUC-Fso-038228	Fusarium solani	34.83	2.00e-11	61.20
IUUC-Ggr-039739	Gaeumannomyces graminis	34.38	1.00e-13	68.60
IUUC-Gga-040150	Gallus gallus	62.50	2.00e-02	31.60
IUUC-Gma-042877	Glycine max	33.85	9.30e-02	32.00
IUUC-Kpa-049090	Komagataella pastoris	34.15	6.00e-39	152.00
IUUC-Lma-053283	Leptosphaeria maculans	30.19	6.00e-17	80.10
IUUC-Mor-057240	Magnaporthe oryzae	32.32	6.00e-13	66.60
IUUC-Mpo-057338	Magnaporthe poae	34.38	2.00e-13	68.20
IUUC-Mla-059175	Melampsora laricipopulina	30.11	1.00e-08	52.40
IUUC-Mvi-060333	Microbotryum violaceum	33.75	2.00e-06	45.40
IUUC-Mdo-062820	Monodelphis domestica	40.00	1.50e-02	32.00
IUUC-Mlu-067863	Myotis lucifugus	33.87	7.00e-03	32.30
IUUC-Nfi-068572	Neosartorya fischeri	33.65	2.00e-11	61.60
IUUC-Ncr-068926	Neurospora crassa	35.19	1.00e-14	72.40
IUUC-Oan-073542	Ornithorhynchus anatinus	31.18	1.10e-02	32.00
IUUC-Oni-082193	Oryza nivara	29.41	1.20e-02	30.40
IUUC-Ola-086387	Oryzias latipes	24.73	3.30e-02	30.80
IUUC-Psi-093178	Pelodiscus sinensis	30.11	1.00e-03	35.00
IUUC-Pno-094962	Phaeosphaeria nodorum	32.58	3.00e-08	50.40
IUUC-Ppa-095207	Physcomitrella patens	40.91	6.80e-02	28.90
IUUC-Pfo-096364	Poecilia formosa	41.86	3.80e-02	31.20
IUUC-Ppe-101993	Prunus persica	42.86	1.50e-02	34.70
IUUC-Pgr-103290	Puccinia graminis	28.71	2.00e-07	48.10
IUUC-Ptt-103960	Puccinia triticina	29.41	5.00e-07	47.40
IUUC-Pte-104175	Pyrenophora teres	33.33	1.00e-08	51.60
IUUC-Pyt-104719	Pyrenophora triticirepentis	50.94	2.00e-08	51.20
IUUC-Sja-108002	Schizosaccharomyces japonicus	26.56	9.00e-15	72.00
IUUC-Spo-108164	Schizosaccharomyces pombe	27.09	2.00e-20	90.50
IUUC-Ssl-108515	Sclerotinia sclerotiorum	26.92	1.00e-20	92.00
IUUC-Sre-114944	Sporisorium reilianum	26.40	1.00e-16	79.30
IUUC-Tgu-116713	Taeniopygia guttata	28.26	9.00e-03	32.30
IUUC-Tre-122178	Trichoderma reesei	30.48	5.00e-22	96.30
IUUC-Tvi-122625	Trichoderma virens	38.39	4.00e-12	63.90
IUUC-Tme-126876	Tuber melanosporum	26.23	9.00e-19	85.90
IUUC-Uma-129468	Ustilago maydis	28.35	5.00e-17	80.50
IUUC-Vda-129940	Verticillium dahliae	31.52	8.00e-14	69.30
IUUC-Vpa-130250	Vicugna pacos	29.41	1.40e-02	31.60
IUUC-Yli-134380	Yarrowia lipolytica	37.34	4.00e-18	84.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence