iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088479

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03035532

Gene Name

WDR38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000008507.2	ENSOGAT00000008512.2	ENSOGAP00000007621.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-47	157.1	190	223
UBD/Beta-Prp	7.70e-66	222.3	16	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           gH++ ++cl++  s +ll+sGs+D+ti++W + t 
   Q: 190  GHSGNISCLCYsaS-GLLASGSWDKTIHIWKPMTS 223
           8**********754.***************75544 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgh 93
           ++g h + +++ +fspd++ l+t+s+dg +  w++++g ll++l gh+++v+ ++fspdg +++++s Drt+++wd+   kc+++lkgh
   Q: 16   FFGWHRGEVNSSAFSPDSQTLLTASEDGYVYGWETRSGRLLWRLGGHTGPVKFCRFSPDGHLFASTSCDRTVRLWDVARAKCLRVLKGH 104
           56778899999****************************************************************************** PP
   S: 94   edsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg 169
           ++sv ++sfsp++  l+sG++d+ + +w++++g  l+  l+gh ++v++  ++p++n+l++Gs D+t+rlWdl+  
   Q: 105  QRSVETVSFSPDSRQLASGGWDKHVLLWEVQSGRMLR-RLAGHCDSVQSSDFSPSTNCLATGSWDSTIRLWDLRAS 179
           ************************************9.**********************************9875 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MNSKAPGTLA VGRVKFFGWH RGEVNSSAFS PDSQTLLTAS EDGYVYGWET RSGRLLWRLG 60
GHTGPVKFCR FSPDGHLFAS TSCDRTVRLW DVARAKCLRV LKGHQRSVET VSFSPDSRQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACAGCA AGGCCCCAGG GACCCTGGCC GTGGGGAGGG TGAAATTCTT CGGCTGGCAT 60
CGTGGGGAGG TGAGGCCCAG AAGGCACTAC TCCCACTCTA GGCTTTGGGT CTAGAGTGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0002244--P:hematopoietic progenitor cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001664	Ailuropoda melanoleuca	81.36	4.00e-141	493.00
IUUC-Aor-010042	Aspergillus oryzae	39.93	3.00e-55	208.00
IUUC-Ame-010858	Astyanax mexicanus	47.80	2.00e-75	275.00
IUUC-Bta-012352	Bos taurus	80.34	2.00e-140	491.00
IUUC-Cja-019585	Callithrix jacchus	82.99	7.00e-144	503.00
IUUC-Cfa-020062	Canis familiaris	77.04	4.00e-117	414.00
IUUC-Csa-023528	Chlorocebus sabaeus	85.08	2.00e-146	511.00
IUUC-Cin-025426	Ciona intestinalis	35.99	3.00e-54	204.00
IUUC-Dre-027740	Danio rerio	50.51	1.00e-48	186.00
IUUC-Dno-030012	Dasypus novemcinctus	67.98	7.00e-126	443.00
IUUC-Dor-030536	Dipodomys ordii	63.57	2.00e-101	362.00
IUUC-Ete-032871	Echinops telfairi	75.32	2.00e-97	348.00
IUUC-Eca-033729	Equus caballus	84.41	2.00e-146	511.00
IUUC-Eeu-034740	Erinaceus europaeus	77.97	2.00e-135	474.00
IUUC-Fca-036514	Felis catus	82.37	1.00e-143	502.00
IUUC-Ggo-044793	Gorilla gorilla	81.36	5.00e-141	493.00
IUUC-Hsa-046414	Homo sapiens	83.45	9.00e-144	502.00
IUUC-Itr-048798	Ictidomys tridecemlineatus	78.64	2.00e-128	451.00
IUUC-Lch-049905	Latimeria chalumnae	51.39	3.00e-86	311.00
IUUC-Loc-052101	Lepisosteus oculatus	51.77	2.00e-82	298.00
IUUC-Laf-053443	Loxodonta africana	75.08	4.00e-131	460.00
IUUC-Mcc-055346	Macaca mulatta	84.75	2.00e-146	511.00
IUUC-Meu-056531	Macropus eugenii	62.66	1.00e-78	285.00
IUUC-Mmr-061721	Microcebus murinus	85.76	4.00e-149	520.00
IUUC-Mdo-062379	Monodelphis domestica	61.11	1.00e-103	369.00
IUUC-Mmu-064175	Mus musculus	73.90	3.00e-128	450.00
IUUC-Mpu-066361	Mustela putorius furo	81.69	6.00e-143	499.00
IUUC-Mlu-067300	Myotis lucifugus	61.20	2.00e-91	328.00
IUUC-Nle-070150	Nomascus leucogenys	84.12	6.00e-145	506.00
IUUC-Opr-071060	Ochotona princeps	71.19	3.00e-108	384.00
IUUC-Ocu-074101	Oryctolagus cuniculus	80.68	2.00e-136	478.00
IUUC-Oar-089608	Ovis aries	81.29	7.00e-141	493.00
IUUC-Ptr-091521	Pan troglodytes	84.41	1.00e-146	512.00
IUUC-Pan-092092	Papio anubis	84.75	2.00e-146	511.00
IUUC-Pab-098454	Pongo abelii	85.42	1.00e-147	515.00
IUUC-Pca-100981	Procavia capensis	81.36	1.00e-142	498.00
IUUC-Pva-102491	Pteropus vampyrus	82.71	1.00e-144	505.00
IUUC-Rno-105417	Rattus norvegicus	76.92	2.00e-123	434.00
IUUC-Sha-107649	Sarcophilus harrisii	62.72	9.00e-106	376.00
IUUC-Sar-113110	Sorex araneus	63.61	7.00e-81	293.00
IUUC-Ssc-116197	Sus scrofa	79.32	1.00e-138	485.00
IUUC-Tbe-127734	Tupaia belangeri	81.71	9.00e-77	280.00
IUUC-Ttr-128709	Tursiops truncatus	78.04	2.00e-133	468.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence