iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__2997__AT4G10150.1	fgenesh2_kg.6__2997__AT4G10150.1	fgenesh2_kg.6__2997__AT4G10150.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.00e-07	30.8	111	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl d+  ++ +  +p CgH+fh +C+ +w         + +CPlCr
   Q: 111  CSVCLADYqaEEKLQQMPaCGHTFHMECIDRW------LTSHTTCPLCR 153
           9*******65333556669*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSYSDPNQNP IPETYAPSNS TESEKLKLYQ AFIFSVPICF TFIVLFVLYV IYLRRNSTTN 60
VDWSSLGMRG GIFVPTNNNL STAELGLSKD VREMLPIVIY KESFTVKDSQ CSVCLADYQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTACA GTGACCCAAA CCAAAACCCA ATTCCAGAAA CTTACGCTCC ATCGAACTCA 60
ACTGAATCCG AGAAACTGAA ACTTTACCAA GCTTTTATCT TCTCTGTTCC AATCTGTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_489863

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007076	Arabidopsis thaliana	91.14	5.00e-127	445.00
IUUC-Aor-010095	Aspergillus oryzae	53.33	2.00e-12	65.10
IUUC-Bdi-014087	Brachypodium distachyon	44.23	1.00e-38	152.00
IUUC-Bol-016221	Brassica oleracea	59.72	3.00e-64	237.00
IUUC-Bra-017017	Brassica rapa	72.34	5.00e-58	215.00
IUUC-Gma-043458	Glycine max	56.20	9.00e-37	145.00
IUUC-Lpe-051002	Leersia perrieri	41.59	1.00e-38	152.00
IUUC-Mtr-058067	Medicago truncatula	57.82	3.00e-41	160.00
IUUC-Mvi-060267	Microbotryum violaceum	33.66	3.00e-11	63.50
IUUC-Mac-065514	Musa acuminata	39.21	5.00e-36	143.00
IUUC-Oba-075393	Oryza barthii	41.35	3.00e-39	154.00
IUUC-Obr-076149	Oryza brachyantha	45.21	2.00e-38	151.00
IUUC-Ogl-077140	Oryza glaberrima	41.35	3.00e-39	154.00
IUUC-Ogu-078926	Oryza glumaepatula	41.35	3.00e-39	154.00
IUUC-Oin-080003	Oryza indica	43.83	8.00e-33	132.00
IUUC-Ome-081399	Oryza meridionalis	39.92	2.00e-38	151.00
IUUC-Oni-082750	Oryza nivara	41.35	4.00e-39	153.00
IUUC-Opu-083446	Oryza punctata	39.41	2.00e-38	151.00
IUUC-Oru-084873	Oryza rufipogon	41.35	3.00e-39	154.00
IUUC-Osa-085898	Oryza sativa	41.35	3.00e-39	154.00
IUUC-Pop-099279	Populus trichocarpa	48.12	5.00e-27	113.00
IUUC-Ppe-101232	Prunus persica	43.82	1.00e-37	148.00
IUUC-Pyt-104807	Pyrenophora triticirepentis	48.98	8.00e-11	61.20
IUUC-Smo-109214	Selaginella moellendorffii	44.78	1.00e-25	109.00
IUUC-Sit-110610	Setaria italica	50.30	3.00e-38	150.00
IUUC-Sly-111610	Solanum lycopersicum	59.38	2.00e-44	171.00
IUUC-Stu-112875	Solanum tuberosum	58.12	5.00e-43	167.00
IUUC-Sbi-114101	Sorghum bicolor	50.91	1.00e-39	155.00
IUUC-Tca-121298	Theobroma cacao	56.50	2.00e-45	175.00
IUUC-Tae-124847	Triticum aestivum	52.63	2.00e-37	148.00
IUUC-Tur-126109	Triticum urartu	51.97	4.00e-37	147.00
IUUC-Vvi-131331	Vitis vinifera	47.50	1.00e-44	172.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence