iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007382

UUCD1 version

UUC-ArT-01254

Ensembl Protein ID

AT4G10160.1

UniProt Accession

Q9SN27; Q4TU18; ATL59_ARATH

Genbank Protein ID

AAY57604.1; CAB39768.1; CAB78139.1; AEE82849.1; AAM67448.1

Protein Name

E3 ubiquitin-protein ligase ATL59; RING-H2 finger protein ATL59; RING-type E3 ubiquitin transferase ATL59

Genbank Nucleotide ID

DQ059118; AF096373; AL161516; CP002687; AY122915

Gene Name

ATL59; At4g10160; F28M11.80; T9A4.20

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G10160	AT4G10160.1	AT4G10160.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein-protein Interaction
Mentha
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	16339806

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	8.40e-07	30.3	97	139

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl d+  ++ +  +p CgH+fh +C+  w         + +CPlCr
   Q: 97   CSVCLGDYqaEEKLQQMPsCGHTFHMECIDLW------LTSHTTCPLCR 139
           9*******65332555558*************......**********8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8, UBC10, UBC11, and UBC34 in vitro.

Protein Sequence
(Fasta)

MSFIDPRTYI PSNSTESQIL KFTFIVCVPI CVILIVLLVL YIMRRNSNTN VDWSSLGGFV 60
PTNNNLSTAE LGLSKDIREM LPIVIYKESF TVNDTQCSVC LGDYQAEEKL QQMPSCGHTF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTATTCTT TTTTTCAGAC AAGTGACAAG GAAGACAGAA AGTGAAATAA GTCTTGTCTC 60
TTTTTTTTTT TTTGGTGTGG AATATTGGTT GAGTTTGAGT GACGATGTCT TTCATCGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0016567--P:protein ubiquitination

KEGG

ath:AT4G10160

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aor-010095	Aspergillus oryzae	54.17	5.00e-13	67.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence