iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-131967

Ensembl Protein ID

ENSXETP00000043319.2

UniProt Accession

F6YUT8; F6YUT8_XENTR

Genbank Protein ID

ENSXETP00000043319

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAMC01143977

Gene Name

psmd4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000020049.2	ENSXETT00000043319.2	ENSXETP00000043319.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	1.60e-06	27.7	189	206
UBD/Alpha-Helix/UIM	4.4e-05	14.5	119	136

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEee 18
           +Ede+++ A+++Slq +e
   Q: 189  TEDEQIAYAMQMSLQGAE 206
           59*************998 PP

UBD/Alpha-Helix/UIM

   S: 3    deeLqlAlalSlqEeees 20
           d+eL+lAl++S++E++++
   Q: 119  DPELALALRVSMEEQRQR 136
           99*************985 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

LALKHRQGKN HKMRIIAFVG SPVEDNEKDL VKLAKRLKKE KVSVDIINFG EEENNTEKLT 60
AFINTLNGKD GTGSHLVTVP PGPSLADALI SSPILAGEGG AMLGLGASDF EFGVDPSADP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGGCACTGA AGCACCGCCA GGGCAAGAAC CACAAGATGA GGATAATCGC CTTTGTGGGG 60
AGTCCAGTGG AGGACAATGA GAAGGATGTG AGTATCGCTA CATTATTCCA CTCCCCTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027040--Proteasome_su_Rpn10
IPR003903--UIM_dom
IPR002035--VWF_A

PROSITE

PS50330--UIM

Pfam

PF02809--UIM

SMART

SM00726--UIM

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0008540--C:proteasome regulatory particle, base subcomplex
GO:0031593--F:polyubiquitin binding
GO:0043248--P:proteasome assembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001241	Ailuropoda melanoleuca	90.00	2.00e-113	401.00
IUUC-Atr-002938	Amborella trichopoda	38.41	5.00e-30	125.00
IUUC-Apl-003881	Anas platyrhynchos	95.97	2.00e-56	211.00
IUUC-Aca-004397	Anolis carolinensis	96.92	2.00e-61	228.00
IUUC-Aly-005564	Arabidopsis lyrata	38.99	2.00e-26	112.00
IUUC-Ath-007436	Arabidopsis thaliana	38.63	9.00e-26	110.00
IUUC-Ago-007858	Ashbya gossypii	51.11	2.00e-32	132.00
IUUC-Acl-008094	Aspergillus clavatus	45.59	6.00e-15	74.30
IUUC-Afl-008689	Aspergillus flavus	47.79	3.00e-16	78.60
IUUC-Afu-008959	Aspergillus fumigatus	47.01	3.00e-15	75.50
IUUC-Ani-009344	Aspergillus nidulans	44.60	9.00e-14	70.10
IUUC-Ang-009602	Aspergillus niger	46.32	7.00e-15	73.90
IUUC-Aor-009906	Aspergillus oryzae	47.79	5.00e-16	77.80
IUUC-Ate-010267	Aspergillus terreus	47.06	2.00e-15	76.30
IUUC-Ame-011018	Astyanax mexicanus	84.44	1.00e-114	405.00
IUUC-Bgr-012200	Blumeria graminis	49.64	3.00e-23	102.00
IUUC-Bta-013066	Bos taurus	91.11	1.00e-112	399.00
IUUC-Bci-013904	Botrytis cinerea	54.29	5.00e-24	104.00
IUUC-Bdi-014537	Brachypodium distachyon	36.55	5.00e-28	118.00
IUUC-Bol-015474	Brassica oleracea	47.83	2.00e-23	103.00
IUUC-Bra-018039	Brassica rapa	47.83	2.00e-23	103.00
IUUC-Cel-018187	Caenorhabditis elegans	39.08	5.00e-28	118.00
IUUC-Cja-019738	Callithrix jacchus	89.71	5.00e-113	400.00
IUUC-Cfa-020362	Canis familiaris	90.37	1.00e-113	402.00
IUUC-Cpo-021297	Cavia porcellus	91.11	1.00e-112	400.00
IUUC-Cre-022783	Chlamydomonas reinhardtii	53.79	3.00e-21	95.10
IUUC-Cho-024800	Choloepus hoffmanni	83.64	6.00e-50	191.00
IUUC-Cin-025469	Ciona intestinalis	55.30	4.00e-51	195.00
IUUC-Csv-026297	Ciona savignyi	53.18	4.00e-61	228.00
IUUC-Cgl-026657	Colletotrichum gloeosporioides	48.57	7.00e-14	70.90
IUUC-Cne-027027	Cryptococcus neoformans	46.21	7.00e-25	107.00
IUUC-Cme-027212	Cyanidioschyzon merolae	43.33	1.00e-22	100.00
IUUC-Dre-027759	Danio rerio	82.96	4.00e-112	397.00
IUUC-Dno-029528	Dasypus novemcinctus	89.34	5.00e-113	400.00
IUUC-Dor-030255	Dipodomys ordii	89.34	4.00e-112	397.00
IUUC-Dse-031464	Dothistroma septosporum	48.59	6.00e-28	117.00
IUUC-Dme-032000	Drosophila melanogaster	70.23	5.00e-46	178.00
IUUC-Ete-032762	Echinops telfairi	89.34	2.00e-112	399.00
IUUC-Eca-034399	Equus caballus	91.11	7.00e-117	414.00
IUUC-Eeu-035072	Erinaceus europaeus	89.71	8.00e-112	396.00
IUUC-Fca-035993	Felis catus	88.97	2.00e-112	398.00
IUUC-Fal-037623	Ficedula albicollis	55.11	7.00e-66	244.00
IUUC-Fox-037746	Fusarium oxysporum	45.32	7.00e-25	107.00
IUUC-Fso-038431	Fusarium solani	49.64	2.00e-26	112.00
IUUC-Gmo-039290	Gadus morhua	80.67	5.00e-88	317.00
IUUC-Ggr-039821	Gaeumannomyces graminis	50.00	5.00e-19	88.20
IUUC-Gga-040288	Gallus gallus	91.85	1.00e-110	392.00
IUUC-Gac-042587	Gasterosteus aculeatus	83.64	2.00e-110	393.00
IUUC-Gma-044042	Glycine max	51.85	8.00e-26	110.00
IUUC-Ggo-044628	Gorilla gorilla	89.71	5.00e-113	400.00
IUUC-Hsa-045850	Homo sapiens	91.11	5.00e-117	414.00
IUUC-Hvu-047715	Hordeum vulgare	47.10	4.00e-25	108.00
IUUC-Itr-048388	Ictidomys tridecemlineatus	88.97	6.00e-112	397.00
IUUC-Kpa-049158	Komagataella pastoris	54.03	2.00e-23	102.00
IUUC-Lch-050472	Latimeria chalumnae	89.01	8.00e-110	391.00
IUUC-Lpe-051233	Leersia perrieri	46.38	1.00e-22	102.00
IUUC-Loc-052437	Lepisosteus oculatus	94.40	6.00e-66	245.00
IUUC-Lma-053295	Leptosphaeria maculans	52.41	1.00e-18	86.70
IUUC-Laf-053504	Loxodonta africana	89.34	2.00e-112	399.00
IUUC-Mcc-054877	Macaca mulatta	89.71	1.00e-112	399.00
IUUC-Meu-056114	Macropus eugenii	90.77	7.00e-116	410.00
IUUC-Mor-057212	Magnaporthe oryzae	43.57	5.00e-19	87.80
IUUC-Mpo-057587	Magnaporthe poae	51.04	2.00e-19	89.40
IUUC-Mtr-058520	Medicago truncatula	35.31	1.00e-30	127.00
IUUC-Mla-059105	Melampsora laricipopulina	38.78	5.20e-02	31.60
IUUC-Mga-059537	Meleagris gallopavo	89.26	3.00e-113	401.00
IUUC-Mvi-060277	Microbotryum violaceum	31.01	4.00e-13	68.90
IUUC-Mmr-061736	Microcebus murinus	90.37	1.00e-109	389.00
IUUC-Mdo-062403	Monodelphis domestica	90.74	6.00e-116	411.00
IUUC-Mmu-063937	Mus musculus	87.50	6.00e-105	374.00
IUUC-Mac-065456	Musa acuminata	37.06	4.00e-30	125.00
IUUC-Mpu-065901	Mustela putorius furo	90.00	4.00e-113	400.00
IUUC-Mlu-067994	Myotis lucifugus	91.48	8.00e-118	416.00
IUUC-Nfi-068540	Neosartorya fischeri	47.01	3.00e-15	75.50
IUUC-Ncr-068760	Neurospora crassa	51.77	2.00e-28	119.00
IUUC-Nle-069463	Nomascus leucogenys	89.71	7.00e-113	400.00
IUUC-Opr-070298	Ochotona princeps	90.07	3.00e-114	404.00
IUUC-Ont-072615	Oreochromis niloticus	84.76	8.00e-114	403.00
IUUC-Ocu-074141	Oryctolagus cuniculus	89.71	6.00e-114	403.00
IUUC-Oba-075955	Oryza barthii	46.38	2.00e-23	102.00
IUUC-Obr-076545	Oryza brachyantha	45.65	2.00e-21	97.10
IUUC-Ogl-077252	Oryza glaberrima	46.38	2.00e-23	102.00
IUUC-Ogu-078986	Oryza glumaepatula	46.38	2.00e-23	102.00
IUUC-Oin-080166	Oryza indica	46.38	3.00e-23	103.00
IUUC-Olo-080390	Oryza longistaminata	46.38	7.00e-23	103.00
IUUC-Ome-082015	Oryza meridionalis	46.38	2.00e-23	103.00
IUUC-Oni-082397	Oryza nivara	46.38	2.00e-23	102.00
IUUC-Opu-083674	Oryza punctata	46.38	2.00e-23	103.00
IUUC-Oru-085199	Oryza rufipogon	46.38	2.00e-23	102.00
IUUC-Osa-085911	Oryza sativa	46.38	2.00e-23	102.00
IUUC-Ola-087383	Oryzias latipes	83.64	2.00e-112	400.00
IUUC-Olu-087857	Ostreococcus lucimarinus	44.21	4.00e-15	74.70
IUUC-Oga-088882	Otolemur garnettii	89.63	8.00e-114	403.00
IUUC-Oar-089311	Ovis aries	91.48	2.00e-113	401.00
IUUC-Ptr-090931	Pan troglodytes	91.11	5.00e-117	414.00
IUUC-Pan-092286	Papio anubis	91.11	6.00e-117	414.00
IUUC-Psi-093908	Pelodiscus sinensis	84.50	3.00e-109	388.00
IUUC-Pma-094737	Petromyzon marinus	77.26	3.00e-93	335.00
IUUC-Pno-094807	Phaeosphaeria nodorum	50.35	3.00e-23	102.00
IUUC-Ppa-095749	Physcomitrella patens	44.22	5.00e-20	91.70
IUUC-Pfo-097212	Poecilia formosa	83.27	1.00e-112	399.00
IUUC-Pab-097708	Pongo abelii	91.11	1.00e-116	412.00
IUUC-Pop-099924	Populus trichocarpa	50.00	4.00e-24	105.00
IUUC-Pca-100722	Procavia capensis	97.58	8.00e-58	217.00
IUUC-Ppe-101877	Prunus persica	36.51	3.00e-37	149.00
IUUC-Pva-103185	Pteropus vampyrus	89.71	3.00e-113	401.00
IUUC-Pgr-103361	Puccinia graminis	36.30	3.00e-13	69.30
IUUC-Ptt-103848	Puccinia triticina	36.05	2.00e-11	62.80
IUUC-Pte-104114	Pyrenophora teres	50.00	9.00e-23	100.00
IUUC-Pyt-104662	Pyrenophora triticirepentis	50.00	8.00e-23	100.00
IUUC-Rno-104906	Rattus norvegicus	90.44	1.00e-116	412.00
IUUC-Sce-106427	Saccharomyces cerevisiae	49.65	5.00e-30	124.00
IUUC-Sha-106574	Sarcophilus harrisii	90.74	2.00e-115	408.00
IUUC-Sja-107706	Schizosaccharomyces japonicus	50.82	5.00e-21	94.40
IUUC-Spo-108378	Schizosaccharomyces pombe	46.67	3.00e-24	105.00
IUUC-Smo-109639	Selaginella moellendorffii	39.54	3.00e-29	122.00
IUUC-Sit-110284	Setaria italica	50.00	7.00e-23	101.00
IUUC-Sly-111246	Solanum lycopersicum	34.82	4.00e-28	118.00
IUUC-Stu-112695	Solanum tuberosum	33.23	4.00e-28	119.00
IUUC-Sar-113015	Sorex araneus	95.18	1.00e-42	167.00
IUUC-Sbi-114495	Sorghum bicolor	50.00	7.00e-23	101.00
IUUC-Sre-114891	Sporisorium reilianum	54.01	2.00e-28	119.00
IUUC-Ssc-116142	Sus scrofa	90.74	1.00e-116	412.00
IUUC-Tgu-116946	Taeniopygia guttata	87.78	4.00e-101	360.00
IUUC-Tru-118485	Takifugu rubripes	84.39	1.00e-114	407.00
IUUC-Tsy-119004	Tarsius syrichta	88.60	9.00e-112	396.00
IUUC-Tni-120074	Tetraodon nigroviridis	85.13	1.00e-114	405.00
IUUC-Tca-121251	Theobroma cacao	48.23	2.00e-25	109.00
IUUC-Tre-122168	Trichoderma reesei	52.94	6.00e-30	124.00
IUUC-Tvi-122655	Trichoderma virens	52.94	4.00e-25	108.00
IUUC-Tae-124568	Triticum aestivum	47.10	5.00e-25	108.00
IUUC-Tur-126420	Triticum urartu	47.10	6.00e-25	108.00
IUUC-Tme-126937	Tuber melanosporum	53.85	4.00e-27	115.00
IUUC-Tbe-128080	Tupaia belangeri	87.87	4.00e-110	390.00
IUUC-Ttr-128811	Tursiops truncatus	89.71	5.00e-113	400.00
IUUC-Uma-129436	Ustilago maydis	54.74	2.00e-29	123.00
IUUC-Vda-129920	Verticillium dahliae	48.97	3.00e-18	85.50
IUUC-Vpa-130762	Vicugna pacos	84.26	1.00e-49	190.00
IUUC-Vvi-130840	Vitis vinifera	47.18	6.00e-23	101.00
IUUC-Xma-134224	Xiphophorus maculatus	82.90	1.00e-111	396.00
IUUC-Yli-134643	Yarrowia lipolytica	57.86	3.00e-28	118.00
IUUC-Zma-135870	Zea mays	37.05	4.00e-27	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence