iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057743

Ensembl Protein ID

AET04495

UniProt Accession

G7L9M1; A0A0C3Y5F2; G7L9M1_MEDTR

Genbank Protein ID

AET04495.2

Protein Name

Damaged DNA-binding protein 1A

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g089380

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g089380	AET04495	AET04495

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DDB1	0	1635.3	735	1089

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DDB1

   S: 782  elseleenevnfllvlDkntfelllaqdlrewEtavsllSqklkdDseeyyvvktalvlpeenelkkgrilvfsvedslklkLltvaekkvkgavidlv 880
           +  ++ee+e++f+++lD++tf +++ ++l+ +E+++ ++S+++ dD+++yy+v+ta+vlpeene++kgrilvfsve++   kL+ vaek++kgav+ l+
   Q: 735  NSASAEESEMHFVRLLDDQTFDFISVYPLDTYEYGCFIISCSFSDDNNVYYCVGTAYVLPEENEPTKGRILVFSVEEG---KLQLVAEKETKGAVYCLN 830
           556789************************************************************************...****************** PP
   S: 881  klNgkllaainseirlyewkvmgtdekelrkeCernntilaLtlktrkdfivVgDlmrsvtLllykdlegsfeEsardynlewmsaveilnddiflgae 979
           ++Ngkllaain++i+ly+w +++++++el++eC+++++ilaL+++tr+dfivVgDlm+s++Ll+yk++eg++eE+ardyn++wmsaveil+dd++lgae
   Q: 831  AFNGKLLAAINQKIQLYKWVLREDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEERARDYNANWMSAVEILDDDVYLGAE 929
           *************************************************************************************************** PP
   S: 980  ncgNlfvvkkdikagltdeerslleevgefrlgefvevfrfgtlvlqdvgerevnrssevifgtengeigvilrlrrellkflrnlestlkkvikrvak 1078
           n +Nlf+v+k+ ++g+tdeer +le+ ge++lgef+++fr+g+lv++ + +++v+++++vifgt ng+igvi++l++e++ fl++l+s+l+kvik+v++
   Q: 930  NSFNLFTVRKN-SEGATDEERGRLEVAGEYHLGEFINRFRHGSLVMRLP-DSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKVIKGVGG 1026
           ***********.***********************************98.************************************************* PP
   S: 1079 ieHssyRsFetekrterasgfvdgdLiesilDlsrdkavdilkvlyekrwnskkevsveeivKlveelkrlh 1150
           ++H+++RsF++ek+t +a++f+dgdLies+lDl r+k+ +i+k +         evsvee+ K+veel+rlh
   Q: 1027 LSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLKRSKMDEISKAM---------EVSVEELAKRVEELTRLH 1089
           *********************************************.........9***************98 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSIWNYVVTA HKPTNVTHSC VGNFTSPQDL NLILAKCTRI EIHLLTAQGL QSILDVPLYG 60
RIATLELFRP HGETQDFLFI ATERYKFCVL QWDTEKSELV TRSMGDVSDR IGRPTDNGQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAAAGGGT CAAATTCGAG GAGGGGGTTT GGGTTATATA GAAGTGAAAG TGAGAGAGTG 60
GCGTCGCAAC GCAACGGCCC AATCAGACCA CCCATCTCTC AATTAATCAA TCAATCGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-1185--Reference proteome

Interpro

IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0006281--P:DNA repair

KEGG

mtr:MTR_8g089380

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000120	Aegilops tauschii	79.10	0.00e+00	1843.00
IUUC-Aml-002096	Ailuropoda melanoleuca	51.53	0.00e+00	1174.00
IUUC-Atr-002742	Amborella trichopoda	85.95	0.00e+00	1920.00
IUUC-Apl-003624	Anas platyrhynchos	50.93	0.00e+00	1132.00
IUUC-Aca-005085	Anolis carolinensis	51.66	0.00e+00	1170.00
IUUC-Aly-005857	Arabidopsis lyrata	89.72	0.00e+00	2026.00
IUUC-Ath-006658	Arabidopsis thaliana	89.44	0.00e+00	2021.00
IUUC-Acl-008149	Aspergillus clavatus	29.93	5.00e-123	435.00
IUUC-Afl-008549	Aspergillus flavus	30.27	4.00e-123	435.00
IUUC-Afu-009076	Aspergillus fumigatus	30.30	4.00e-134	471.00
IUUC-Ani-009302	Aspergillus nidulans	28.47	1.00e-110	394.00
IUUC-Ang-009636	Aspergillus niger	29.30	8.00e-107	381.00
IUUC-Aor-010073	Aspergillus oryzae	30.35	5.00e-130	458.00
IUUC-Ate-010422	Aspergillus terreus	29.48	2.00e-124	439.00
IUUC-Ame-011643	Astyanax mexicanus	46.03	0.00e+00	984.00
IUUC-Bgr-012164	Blumeria graminis	29.11	3.00e-119	422.00
IUUC-Bta-012494	Bos taurus	51.53	0.00e+00	1174.00
IUUC-Bci-013957	Botrytis cinerea	29.57	1.00e-118	421.00
IUUC-Bdi-014186	Brachypodium distachyon	83.12	0.00e+00	1867.00
IUUC-Bol-015922	Brassica oleracea	89.07	0.00e+00	2007.00
IUUC-Bra-017300	Brassica rapa	88.89	0.00e+00	2000.00
IUUC-Cel-018239	Caenorhabditis elegans	33.75	2.00e-174	606.00
IUUC-Cja-019165	Callithrix jacchus	51.53	0.00e+00	1174.00
IUUC-Cfa-020406	Canis familiaris	51.53	0.00e+00	1174.00
IUUC-Cpo-022154	Cavia porcellus	51.53	0.00e+00	1174.00
IUUC-Cre-022557	Chlamydomonas reinhardtii	50.31	0.00e+00	1009.00
IUUC-Csa-024061	Chlorocebus sabaeus	51.53	0.00e+00	1174.00
IUUC-Cho-024554	Choloepus hoffmanni	46.80	3.00e-133	469.00
IUUC-Cin-025466	Ciona intestinalis	49.13	0.00e+00	1071.00
IUUC-Csv-026370	Ciona savignyi	48.22	0.00e+00	958.00
IUUC-Cgl-026595	Colletotrichum gloeosporioides	27.99	1.00e-112	400.00
IUUC-Cme-027342	Cyanidioschyzon merolae	30.40	1.00e-135	477.00
IUUC-Dre-027448	Danio rerio	51.43	3.00e-162	564.00
IUUC-Dno-029794	Dasypus novemcinctus	51.76	0.00e+00	1116.00
IUUC-Dor-030789	Dipodomys ordii	45.49	6.00e-120	424.00
IUUC-Dse-031491	Dothistroma septosporum	29.63	1.00e-126	447.00
IUUC-Dme-031940	Drosophila melanogaster	46.48	0.00e+00	982.00
IUUC-Ete-032913	Echinops telfairi	54.12	8.00e-80	291.00
IUUC-Eca-033777	Equus caballus	51.27	0.00e+00	1165.00
IUUC-Eeu-034900	Erinaceus europaeus	49.00	5.00e-164	571.00
IUUC-Fca-035869	Felis catus	51.53	0.00e+00	1174.00
IUUC-Fal-036777	Ficedula albicollis	51.22	0.00e+00	1159.00
IUUC-Fox-037954	Fusarium oxysporum	27.97	7.00e-122	431.00
IUUC-Fso-038292	Fusarium solani	27.64	1.00e-119	424.00
IUUC-Gmo-038815	Gadus morhua	46.28	1.00e-150	526.00
IUUC-Ggr-039907	Gaeumannomyces graminis	26.20	8.00e-110	391.00
IUUC-Gga-040995	Gallus gallus	51.35	0.00e+00	1168.00
IUUC-Gac-042390	Gasterosteus aculeatus	51.09	0.00e+00	1098.00
IUUC-Gma-042904	Glycine max	95.22	0.00e+00	2068.00
IUUC-Ggo-044891	Gorilla gorilla	51.39	0.00e+00	1170.00
IUUC-Hsa-046709	Homo sapiens	51.53	0.00e+00	1174.00
IUUC-Hvu-047504	Hordeum vulgare	82.66	0.00e+00	1870.00
IUUC-Itr-048678	Ictidomys tridecemlineatus	51.62	0.00e+00	1175.00
IUUC-Lch-050565	Latimeria chalumnae	51.18	0.00e+00	1162.00
IUUC-Lpe-051260	Leersia perrieri	83.76	0.00e+00	1875.00
IUUC-Loc-052091	Lepisosteus oculatus	46.88	0.00e+00	790.00
IUUC-Lma-053246	Leptosphaeria maculans	28.99	1.00e-127	450.00
IUUC-Laf-053502	Loxodonta africana	51.53	0.00e+00	1172.00
IUUC-Mcc-054802	Macaca mulatta	52.11	0.00e+00	1163.00
IUUC-Meu-056808	Macropus eugenii	53.13	0.00e+00	774.00
IUUC-Mor-057253	Magnaporthe oryzae	27.05	2.00e-103	370.00
IUUC-Mpo-057562	Magnaporthe poae	26.11	5.00e-106	378.00
IUUC-Mla-059154	Melampsora laricipopulina	26.31	2.00e-89	323.00
IUUC-Mga-059824	Meleagris gallopavo	50.88	0.00e+00	1085.00
IUUC-Mvi-060279	Microbotryum violaceum	29.06	2.00e-119	423.00
IUUC-Mmr-061215	Microcebus murinus	51.18	0.00e+00	1163.00
IUUC-Mdo-062028	Monodelphis domestica	49.28	0.00e+00	931.00
IUUC-Mmu-064327	Mus musculus	51.53	0.00e+00	1173.00
IUUC-Mac-065445	Musa acuminata	87.60	0.00e+00	1939.00
IUUC-Mpu-065814	Mustela putorius furo	49.87	0.00e+00	1111.00
IUUC-Mlu-067136	Myotis lucifugus	51.44	0.00e+00	1167.00
IUUC-Nfi-068355	Neosartorya fischeri	30.22	1.00e-128	454.00
IUUC-Ncr-068620	Neurospora crassa	28.44	3.00e-121	429.00
IUUC-Nle-069566	Nomascus leucogenys	52.02	0.00e+00	1155.00
IUUC-Opr-070915	Ochotona princeps	50.46	0.00e+00	876.00
IUUC-Ont-071753	Oreochromis niloticus	51.70	0.00e+00	1167.00
IUUC-Oan-073187	Ornithorhynchus anatinus	51.73	0.00e+00	1064.00
IUUC-Ocu-074619	Oryctolagus cuniculus	51.53	0.00e+00	1175.00
IUUC-Oba-075091	Oryza barthii	81.08	0.00e+00	1278.00
IUUC-Obr-076425	Oryza brachyantha	83.52	0.00e+00	1872.00
IUUC-Ogu-078794	Oryza glumaepatula	83.76	0.00e+00	1884.00
IUUC-Oin-079725	Oryza indica	82.57	0.00e+00	1845.00
IUUC-Olo-080842	Oryza longistaminata	80.97	0.00e+00	1707.00
IUUC-Ome-081818	Oryza meridionalis	83.76	0.00e+00	1880.00
IUUC-Oni-082879	Oryza nivara	83.21	0.00e+00	1861.00
IUUC-Opu-083361	Oryza punctata	82.90	0.00e+00	1876.00
IUUC-Oru-084781	Oryza rufipogon	83.76	0.00e+00	1883.00
IUUC-Osa-086293	Oryza sativa	83.76	0.00e+00	1883.00
IUUC-Ola-086881	Oryzias latipes	51.35	0.00e+00	1158.00
IUUC-Olu-087674	Ostreococcus lucimarinus	56.14	0.00e+00	1179.00
IUUC-Oga-089056	Otolemur garnettii	51.44	0.00e+00	1174.00
IUUC-Oar-089457	Ovis aries	52.11	0.00e+00	1162.00
IUUC-Ptr-091179	Pan troglodytes	51.46	0.00e+00	1154.00
IUUC-Pan-092019	Papio anubis	51.30	0.00e+00	1164.00
IUUC-Psi-093407	Pelodiscus sinensis	51.02	0.00e+00	1139.00
IUUC-Pma-094272	Petromyzon marinus	51.80	0.00e+00	1066.00
IUUC-Pno-094864	Phaeosphaeria nodorum	29.87	3.00e-134	472.00
IUUC-Ppa-095885	Physcomitrella patens	80.64	0.00e+00	1766.00
IUUC-Pfo-096083	Poecilia formosa	51.75	0.00e+00	1169.00
IUUC-Pab-098652	Pongo abelii	49.70	0.00e+00	1073.00
IUUC-Pop-099593	Populus trichocarpa	91.37	0.00e+00	1994.00
IUUC-Pca-100189	Procavia capensis	50.07	0.00e+00	660.00
IUUC-Ppe-101987	Prunus persica	91.18	0.00e+00	1973.00
IUUC-Pva-102605	Pteropus vampyrus	51.35	0.00e+00	1168.00
IUUC-Pgr-103659	Puccinia graminis	25.53	3.00e-69	256.00
IUUC-Ptt-103884	Puccinia triticina	22.58	1.00e-58	221.00
IUUC-Pte-104233	Pyrenophora teres	30.27	3.00e-136	479.00
IUUC-Pyt-104454	Pyrenophora triticirepentis	30.45	6.00e-133	468.00
IUUC-Rno-106004	Rattus norvegicus	51.62	0.00e+00	1176.00
IUUC-Sha-106726	Sarcophilus harrisii	50.23	0.00e+00	1051.00
IUUC-Sja-107864	Schizosaccharomyces japonicus	25.31	1.00e-90	327.00
IUUC-Spo-108029	Schizosaccharomyces pombe	26.89	2.00e-118	420.00
IUUC-Ssl-108441	Sclerotinia sclerotiorum	29.05	3.00e-111	395.00
IUUC-Smo-108862	Selaginella moellendorffii	80.00	0.00e+00	1826.00
IUUC-Sit-109735	Setaria italica	83.61	0.00e+00	1882.00
IUUC-Sly-111520	Solanum lycopersicum	89.32	0.00e+00	2001.00
IUUC-Sar-113606	Sorex araneus	51.65	2.00e-65	243.00
IUUC-Sbi-114539	Sorghum bicolor	81.15	0.00e+00	1848.00
IUUC-Sre-114936	Sporisorium reilianum	25.10	7.00e-71	262.00
IUUC-Ssc-116038	Sus scrofa	51.53	0.00e+00	1172.00
IUUC-Tgu-117512	Taeniopygia guttata	51.18	0.00e+00	1159.00
IUUC-Tru-117593	Takifugu rubripes	51.05	0.00e+00	1150.00
IUUC-Tsy-119513	Tarsius syrichta	49.52	3.00e-174	605.00
IUUC-Tni-120551	Tetraodon nigroviridis	47.87	0.00e+00	912.00
IUUC-Tca-121505	Theobroma cacao	92.75	0.00e+00	2011.00
IUUC-Tre-122136	Trichoderma reesei	27.88	2.00e-118	419.00
IUUC-Tvi-122512	Trichoderma virens	28.51	1.00e-125	443.00
IUUC-Tae-124186	Triticum aestivum	82.66	0.00e+00	1871.00
IUUC-Tur-126451	Triticum urartu	82.42	0.00e+00	1681.00
IUUC-Tme-127057	Tuber melanosporum	30.04	1.00e-122	433.00
IUUC-Ttr-128891	Tursiops truncatus	50.13	0.00e+00	739.00
IUUC-Uma-129583	Ustilago maydis	28.02	5.00e-70	259.00
IUUC-Vda-129870	Verticillium dahliae	26.05	5.00e-105	375.00
IUUC-Vpa-130117	Vicugna pacos	48.23	0.00e+00	874.00
IUUC-Vvi-131033	Vitis vinifera	91.92	0.00e+00	2051.00
IUUC-Xtr-131987	Xenopus tropicalis	50.91	0.00e+00	1137.00
IUUC-Xma-134117	Xiphophorus maculatus	50.83	0.00e+00	1136.00
IUUC-Zma-134758	Zea mays	83.67	0.00e+00	1883.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence