iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114806

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G236400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g027800	Sb10g027800.1	Sb10g027800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.00e-40	139.9	215	547

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsgyeqqDaq 93
           +Gl+N+  t ++N ++Q+L+ +++lr+++l   +e+ ++     +k +l++ + +l +++w   + k++vsp+e+l+a+ k++ + f+   q D  
   Q: 215  VGLNNIKETDFVNVTIQSLMRVTPLRNFFLI--PENYQH-----RKSPLVHRFGELTRKIWhaRNFKGQVSPHEFLQAVMKASDKrFQIGVQSDPV 303
           6******************************..666655.....578**************999999**********998888777********** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlk........................sqikclecdnvs.s 164
           Ef+++ll++l+ +l                        ++ kkkn+s+i+d Fqg+l+                         +++  + + v+ +
   Q: 304  EFMSWLLNTLHAKL------------------------KSSKKKNRSIIHDCFQGELEvvkevhrkhimekredgdepngeaGSVVGTADGIVTeT 375
           **************........................4577888888888888888877766666666666666666666655555555555546 PP
   S: 165  reepfldlslpvpgkeetkke.........slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekink 251
           ++ pfl l l++p     k            l ++L++f  e   e           + + a+ + ++++lP++Lilh+ Rf  ++++ + ek+ +
   Q: 376  SKVPFLMLGLDLPPPPLFKDAmekniipqvPLFNILKKFDGETVTE---------VVRPSIARMRYRVTRLPKYLILHMRRF--TKNNFFVEKNPT 460
           6778888888888444222223333344445555555555444444.........23333488899****************..88889******* PP
   S: 252  kvefple.Ldlspfctspeekqke..kkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYkr 337
            v+fp + L+l+ +   p+ k+++  + kY+Lia +vH G++++G Y ++v+ ++++ W+++ D +Vte+  + v     s+ Y+ +Y++
   Q: 461  LVNFPVKnLELKDYIPLPKPKENHklRSKYDLIANIVHDGKPGEGCYRVFVQRKSEEaWYEMQDLHVTETLPQMVAL---SETYMQIYEQ 547
           *****999****987665444433349************************9977778*******************...9*******97 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGADEQPSPT RKRDREEEGE DLSDGGAAEK RPRAEGASLL GLATYEDEDE DEAARGHANG 60
RRAVEPDEEE DDDEEDDVRR APERRPRQAE LRRDCPYLDT VNRQVLDFDF EKFCSISLSN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGCAG ACGAGCAGCC ATCCCCGACG CGGAAACGCG ACCGCGAGGA AGAAGGAGAG 60
GACCTCTCCG ATGGGGGCGC CGCCGAGAAG CGGCCGCGCG CAGAGGGCGC GTCCCTGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0000245--P:spliceosomal complex assembly

KEGG

sbi:SORBI_10g027800

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000483	Aegilops tauschii	90.63	0.00e+00	830.00
IUUC-Aml-001846	Ailuropoda melanoleuca	54.72	2.00e-137	481.00
IUUC-Atr-002758	Amborella trichopoda	82.87	0.00e+00	785.00
IUUC-Apl-003336	Anas platyrhynchos	46.65	1.00e-65	243.00
IUUC-Aca-004846	Anolis carolinensis	54.13	2.00e-131	461.00
IUUC-Aly-005683	Arabidopsis lyrata	77.16	0.00e+00	675.00
IUUC-Ath-007661	Arabidopsis thaliana	76.45	0.00e+00	685.00
IUUC-Ago-007802	Ashbya gossypii	32.61	2.00e-58	219.00
IUUC-Acl-008304	Aspergillus clavatus	48.59	4.00e-96	344.00
IUUC-Afl-008735	Aspergillus flavus	52.90	1.00e-44	173.00
IUUC-Afu-009100	Aspergillus fumigatus	46.39	1.00e-91	330.00
IUUC-Ani-009138	Aspergillus nidulans	47.42	4.00e-97	347.00
IUUC-Ang-009661	Aspergillus niger	43.71	4.00e-97	347.00
IUUC-Aor-010235	Aspergillus oryzae	43.53	1.00e-81	296.00
IUUC-Ate-010346	Aspergillus terreus	38.00	3.00e-72	265.00
IUUC-Ame-011688	Astyanax mexicanus	53.03	1.00e-135	475.00
IUUC-Bgr-011998	Blumeria graminis	46.62	3.00e-106	378.00
IUUC-Bta-013407	Bos taurus	53.61	5.00e-137	480.00
IUUC-Bci-013977	Botrytis cinerea	46.68	8.00e-107	380.00
IUUC-Bdi-014361	Brachypodium distachyon	92.44	0.00e+00	843.00
IUUC-Bol-016317	Brassica oleracea	76.45	0.00e+00	673.00
IUUC-Bra-017952	Brassica rapa	76.66	0.00e+00	675.00
IUUC-Cel-018491	Caenorhabditis elegans	48.93	5.00e-120	424.00
IUUC-Cja-019134	Callithrix jacchus	54.72	2.00e-137	481.00
IUUC-Cfa-020098	Canis familiaris	54.72	3.00e-137	481.00
IUUC-Cpo-021595	Cavia porcellus	53.61	4.00e-137	480.00
IUUC-Cre-022886	Chlamydomonas reinhardtii	62.10	2.00e-41	159.00
IUUC-Csa-024121	Chlorocebus sabaeus	54.72	3.00e-137	481.00
IUUC-Cho-025057	Choloepus hoffmanni	48.02	1.00e-47	183.00
IUUC-Cin-025473	Ciona intestinalis	52.33	2.00e-40	158.00
IUUC-Csv-025815	Ciona savignyi	61.00	7.00e-87	313.00
IUUC-Cgl-026416	Colletotrichum gloeosporioides	44.07	2.00e-106	379.00
IUUC-Cne-026802	Cryptococcus neoformans	44.51	1.00e-103	369.00
IUUC-Dre-027870	Danio rerio	53.65	3.00e-134	471.00
IUUC-Dno-029655	Dasypus novemcinctus	53.61	4.00e-137	480.00
IUUC-Dor-030762	Dipodomys ordii	53.61	3.00e-137	481.00
IUUC-Dse-031441	Dothistroma septosporum	45.30	2.00e-101	362.00
IUUC-Dme-032101	Drosophila melanogaster	51.94	7.00e-131	459.00
IUUC-Ete-032841	Echinops telfairi	51.72	2.00e-127	448.00
IUUC-Eca-033463	Equus caballus	53.61	4.00e-137	480.00
IUUC-Eeu-034438	Erinaceus europaeus	52.17	2.00e-72	266.00
IUUC-Fca-035774	Felis catus	54.72	3.00e-137	481.00
IUUC-Fal-036988	Ficedula albicollis	54.58	3.00e-140	490.00
IUUC-Fox-037895	Fusarium oxysporum	44.89	1.00e-107	382.00
IUUC-Fso-038450	Fusarium solani	46.98	1.00e-109	389.00
IUUC-Gmo-038874	Gadus morhua	53.50	3.00e-133	467.00
IUUC-Ggr-040115	Gaeumannomyces graminis	41.91	2.00e-100	358.00
IUUC-Gac-041650	Gasterosteus aculeatus	53.67	5.00e-134	470.00
IUUC-Gma-043697	Glycine max	85.01	0.00e+00	791.00
IUUC-Ggo-044707	Gorilla gorilla	50.86	3.00e-120	424.00
IUUC-Hsa-046041	Homo sapiens	54.72	3.00e-137	481.00
IUUC-Hvu-047816	Hordeum vulgare	83.18	0.00e+00	825.00
IUUC-Itr-048945	Ictidomys tridecemlineatus	56.46	6.00e-98	349.00
IUUC-Lch-050419	Latimeria chalumnae	54.72	1.00e-140	492.00
IUUC-Lpe-051593	Leersia perrieri	83.13	0.00e+00	890.00
IUUC-Loc-052930	Lepisosteus oculatus	54.51	8.00e-137	479.00
IUUC-Lma-053256	Leptosphaeria maculans	46.17	3.00e-107	381.00
IUUC-Laf-053555	Loxodonta africana	53.94	1.00e-136	479.00
IUUC-Mcc-055630	Macaca mulatta	54.72	3.00e-137	481.00
IUUC-Meu-056579	Macropus eugenii	47.40	3.00e-68	252.00
IUUC-Mor-057078	Magnaporthe oryzae	44.54	2.00e-101	362.00
IUUC-Mpo-057607	Magnaporthe poae	37.24	9.00e-78	283.00
IUUC-Mtr-058644	Medicago truncatula	82.19	0.00e+00	756.00
IUUC-Mla-059120	Melampsora laricipopulina	42.52	4.00e-101	361.00
IUUC-Mvi-060429	Microbotryum violaceum	53.50	3.00e-74	271.00
IUUC-Mmr-061313	Microcebus murinus	53.61	2.00e-137	481.00
IUUC-Mdo-062801	Monodelphis domestica	54.94	2.00e-137	481.00
IUUC-Mmu-064424	Mus musculus	53.61	3.00e-140	491.00
IUUC-Mac-064694	Musa acuminata	76.35	0.00e+00	803.00
IUUC-Mpu-065980	Mustela putorius furo	51.89	7.00e-113	399.00
IUUC-Mlu-067007	Myotis lucifugus	53.61	2.00e-137	481.00
IUUC-Nfi-068274	Neosartorya fischeri	46.39	5.00e-92	330.00
IUUC-Ncr-068829	Neurospora crassa	45.81	5.00e-107	380.00
IUUC-Nle-069171	Nomascus leucogenys	54.72	7.00e-137	479.00
IUUC-Opr-070494	Ochotona princeps	48.28	5.00e-112	397.00
IUUC-Ont-072290	Oreochromis niloticus	55.15	5.00e-139	486.00
IUUC-Oan-073099	Ornithorhynchus anatinus	54.91	3.00e-137	481.00
IUUC-Ocu-074642	Oryctolagus cuniculus	53.61	4.00e-137	480.00
IUUC-Oba-075886	Oryza barthii	92.52	0.00e+00	877.00
IUUC-Obr-076220	Oryza brachyantha	92.14	0.00e+00	875.00
IUUC-Ogl-077682	Oryza glaberrima	85.25	0.00e+00	885.00
IUUC-Ogu-078492	Oryza glumaepatula	84.29	0.00e+00	884.00
IUUC-Oin-079956	Oryza indica	84.52	0.00e+00	883.00
IUUC-Olo-080239	Oryza longistaminata	79.33	0.00e+00	729.00
IUUC-Ome-081573	Oryza meridionalis	85.51	0.00e+00	886.00
IUUC-Oni-082975	Oryza nivara	84.52	0.00e+00	883.00
IUUC-Opu-083724	Oryza punctata	85.51	0.00e+00	910.00
IUUC-Oru-084566	Oryza rufipogon	84.49	0.00e+00	884.00
IUUC-Osa-086008	Oryza sativa	84.85	0.00e+00	894.00
IUUC-Ola-086967	Oryzias latipes	53.88	3.00e-135	474.00
IUUC-Olu-087614	Ostreococcus lucimarinus	48.93	1.00e-108	385.00
IUUC-Oga-088047	Otolemur garnettii	47.88	2.00e-79	288.00
IUUC-Oar-089393	Ovis aries	54.72	3.00e-137	481.00
IUUC-Ptr-090561	Pan troglodytes	54.72	3.00e-137	481.00
IUUC-Pan-091812	Papio anubis	53.61	2.00e-137	481.00
IUUC-Psi-093507	Pelodiscus sinensis	48.99	2.00e-67	248.00
IUUC-Pno-095104	Phaeosphaeria nodorum	45.51	1.00e-102	366.00
IUUC-Ppa-095995	Physcomitrella patens	81.47	0.00e+00	760.00
IUUC-Pfo-096754	Poecilia formosa	54.06	1.00e-135	475.00
IUUC-Pab-098053	Pongo abelii	54.72	3.00e-137	481.00
IUUC-Pop-099230	Populus trichocarpa	73.25	0.00e+00	781.00
IUUC-Pca-100407	Procavia capensis	48.07	2.00e-111	395.00
IUUC-Ppe-101699	Prunus persica	79.17	0.00e+00	770.00
IUUC-Pva-103159	Pteropus vampyrus	53.43	2.00e-128	452.00
IUUC-Pgr-103433	Puccinia graminis	44.51	3.00e-103	368.00
IUUC-Ptt-103701	Puccinia triticina	40.53	2.00e-87	315.00
IUUC-Pte-104281	Pyrenophora teres	40.85	2.00e-109	389.00
IUUC-Pyt-104714	Pyrenophora triticirepentis	40.65	4.00e-108	384.00
IUUC-Rno-105531	Rattus norvegicus	50.00	4.00e-141	494.00
IUUC-Sce-106368	Saccharomyces cerevisiae	29.32	9.00e-42	163.00
IUUC-Sha-107093	Sarcophilus harrisii	54.94	4.00e-137	480.00
IUUC-Sja-108004	Schizosaccharomyces japonicus	44.69	6.00e-108	383.00
IUUC-Spo-108018	Schizosaccharomyces pombe	44.32	2.00e-102	365.00
IUUC-Ssl-108460	Sclerotinia sclerotiorum	44.14	2.00e-97	348.00
IUUC-Smo-108892	Selaginella moellendorffii	79.05	0.00e+00	728.00
IUUC-Sit-110782	Setaria italica	91.65	0.00e+00	985.00
IUUC-Sly-111308	Solanum lycopersicum	84.26	0.00e+00	793.00
IUUC-Stu-112447	Solanum tuberosum	84.04	0.00e+00	796.00
IUUC-Sar-113352	Sorex araneus	52.21	8.00e-100	357.00
IUUC-Sre-115059	Sporisorium reilianum	40.12	3.00e-96	345.00
IUUC-Ssc-115677	Sus scrofa	54.60	4.00e-98	350.00
IUUC-Tru-118478	Takifugu rubripes	53.67	3.00e-137	481.00
IUUC-Tsy-119082	Tarsius syrichta	48.83	2.00e-90	325.00
IUUC-Tni-120419	Tetraodon nigroviridis	52.49	3.00e-132	464.00
IUUC-Tca-121294	Theobroma cacao	83.69	0.00e+00	777.00
IUUC-Tre-121962	Trichoderma reesei	47.52	2.00e-108	385.00
IUUC-Tvi-122280	Trichoderma virens	45.29	1.00e-106	379.00
IUUC-Tae-124442	Triticum aestivum	85.56	0.00e+00	917.00
IUUC-Tur-126551	Triticum urartu	92.44	0.00e+00	863.00
IUUC-Tme-126959	Tuber melanosporum	45.79	9.00e-104	369.00
IUUC-Tbe-127737	Tupaia belangeri	54.19	1.00e-130	459.00
IUUC-Ttr-129211	Tursiops truncatus	60.63	2.00e-88	318.00
IUUC-Uma-129591	Ustilago maydis	40.04	8.00e-95	340.00
IUUC-Vda-129674	Verticillium dahliae	44.58	3.00e-101	361.00
IUUC-Vpa-130793	Vicugna pacos	49.56	2.00e-118	419.00
IUUC-Xtr-132430	Xenopus tropicalis	53.52	3.00e-133	468.00
IUUC-Xma-133515	Xiphophorus maculatus	54.53	6.00e-136	476.00
IUUC-Yli-134488	Yarrowia lipolytica	39.91	3.00e-81	295.00
IUUC-Zma-134748	Zea mays	94.20	0.00e+00	996.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence