iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f+d+  ++++p C H+fha+C+  w       s + +CP+Cr
   Q: 129  CAICLNEFEDEetLRLMPpCSHAFHASCIDVW------LSSRSTCPVCR 171
           ********66555888888*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MMTIGKSPIL LHHHVIFLLL LVLQVSGQHQ PRTTAPPYIA QRPNQVPAVI IAMLMFTLLF 60
SMLACCVCYK YTNTSPHGTS SDTEEGGHGE VAFTRRTSRG LGKDVINSFP SFLYSQVKGL 120

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Nucleotide Sequence
(Fasta)

TGGAGTTCAA GAGATGATCC ACAATTATAA CATAGCCAAA AAGAAAAGCT TCTTCACATG 60
ATGACAATCG GGAAGAGTCC GATCTTGCTA CATCATCATG TTATCTTCCT ATTGTTGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0732--Signal
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT1G35330

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005482	Arabidopsis lyrata	87.80	1.00e-163	567.00
IUUC-Ang-009734	Aspergillus niger	47.06	2.00e-12	66.60
IUUC-Aor-010134	Aspergillus oryzae	37.86	1.00e-12	67.00
IUUC-Bol-015889	Brassica oleracea	68.57	2.00e-126	444.00
IUUC-Bra-017520	Brassica rapa	68.08	2.00e-119	421.00
IUUC-Nfi-068514	Neosartorya fischeri	53.45	3.00e-12	65.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence