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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Spo-108336
UUCD1 version UUC-ScP-00214
Ensembl Protein ID SPBC13E7.02.1:pep
UniProt Accession Q9P6R8; CWC24_SCHPO
Genbank Protein ID CAB89877.1
Protein Name Pre-mRNA-splicing factor cwf24; Complexed with cdc5 protein 24
Genbank Nucleotide ID CU329671
Gene Name cwf24; SPBC13E7.02
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPBC13E7.02 SPBC13E7.02.1 SPBC13E7.02.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexHINTMentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 39.33 1.00e-32 139.00 IUUC-Hsa-047000
E3 activity/RING/RING 41.96 4.00e-29 125.00 IUUC-Osa-086166
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description


     Belongs to the 40S cdc5-associated complex (or cwf complex), a spliceosome sub-complex reminiscent of a late-stage spliceosome composed of the U2, U5 and U6 snRNAs and at least brr2, cdc5, cwf2/prp3, cwf3/syf1, cwf4/syf3, cwf5/ecm2, spp42/cwf6, cwf7/spf27, cwf8, cwf9, cwf10, cwf11, cwf12, prp45/cwf13, cwf14, cwf15, cwf16, cwf17, cwf18, cwf19, cwf20, cwf21, cwf22, cwf23, cwf24, cwf25, cwf26, cyp7/cwf27, cwf28, cwf29/ist3, lea1, msl1, prp5/cwf1, prp10, prp12/sap130, prp17, prp22, sap61, sap62, sap114, sap145, slu7, smb1, smd1, smd3, smf1, smg1 and syf2.
 Belongs to the 40S cdc5-associated complex (or cwf complex), a spliceosome sub-complex reminiscent of a late-stage spliceosome composed of the U2, U5 and U6 snRNAs and at least brr2, cdc5, cwf2/prp3, cwf3/syf1, cwf4/syf3, cwf5/ecm2, spp42/cwf6, cwf7/spf27, cwf8, cwf9, cwf10, cwf11, cwf12, prp45/cwf13, cwf14, cwf15, cwf16, cwf17, cwf18, cwf19, cwf20, cwf21, cwf22, cwf23, cwf24, cwf25, cwf26, cyp7/cwf27, cwf28, cwf29/ist3, lea1, msl1, prp5/cwf1, prp10, prp12/sap130, prp17, prp22, sap61, sap62, sap114, sap145, slu7, smb1, smd1, smd3, smf1, smg1 and syf2.
Protein Sequence
(Fasta)
MEQKNLNINQ ASGSKINTEL AVPIFQSRRR HRPRQGLKRK KGFKRDDDSG GSSESSNEDM 60
RDNIPIVSGR KKTVRLNRLQ RESEQFENSA LKDINVEYQS NLSATGESVN TTTVSAINED 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108336|E3,RING|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACTAAAGCCC AGATTCGGTG GCCACGTATT TAGCTTAGCA GCTTTCTAAA ATTTATATAT 60
TTGCATTTCA CTACAAACTT CTTCTATTTT TGTTGTTTTA TTTTATTTAT TTAAGGGGAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108336|E3,RING|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0507--mRNA processing
KW-0508--mRNA splicing
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0747--Spliceosome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR016181--Acyl_CoA_acyltransferase
IPR000182--GNAT_dom
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51186--GNAT
PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00583--Acetyltransf_1
PF00642--zf-CCCH
SMART

SM00184--RING
SM00356--ZnF_C3H1
Gene Ontology

GO:0005634--C:nucleus
GO:0005684--C:U2-type spliceosomal complex
GO:0003677--F:DNA binding
GO:0008080--F:N-acetyltransferase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0016567--P:protein ubiquitination
GO:0016074--P:snoRNA metabolic process
GO:0034247--P:snoRNA splicing
KEGG spo:SPBC13E7.02
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000118 Aegilops tauschii 39.62 4.00e-36 143.00
IUUC-Aml-002002 Ailuropoda melanoleuca 38.25 5.00e-35 139.00
IUUC-Atr-003145 Amborella trichopoda 33.48 3.00e-30 123.00
IUUC-Apl-003440 Anas platyrhynchos 36.65 7.00e-36 142.00
IUUC-Aca-004421 Anolis carolinensis 34.39 3.00e-37 146.00
IUUC-Aly-006121 Arabidopsis lyrata 38.51 8.00e-36 142.00
IUUC-Ath-007493 Arabidopsis thaliana 31.54 3.00e-35 140.00
IUUC-Ago-007731 Ashbya gossypii 47.20 4.00e-36 142.00
IUUC-Acl-008186 Aspergillus clavatus 43.37 5.00e-46 176.00
IUUC-Afl-008484 Aspergillus flavus 43.09 5.00e-42 162.00
IUUC-Afu-008971 Aspergillus fumigatus 41.47 7.00e-48 182.00
IUUC-Ani-009499 Aspergillus nidulans 47.43 5.00e-47 179.00
IUUC-Ang-009717 Aspergillus niger 43.14 1.00e-47 181.00
IUUC-Aor-009898 Aspergillus oryzae 42.00 1.00e-41 161.00
IUUC-Ate-010508 Aspergillus terreus 42.78 7.00e-44 169.00
IUUC-Ame-011925 Astyanax mexicanus 36.71 6.00e-38 149.00
IUUC-Bgr-012259 Blumeria graminis 50.68 5.00e-43 166.00
IUUC-Bta-012490 Bos taurus 39.34 7.00e-36 142.00
IUUC-Bci-013882 Botrytis cinerea 42.62 1.00e-44 171.00
IUUC-Bdi-014084 Brachypodium distachyon 38.99 2.00e-35 140.00
IUUC-Bol-016607 Brassica oleracea 32.40 3.00e-35 140.00
IUUC-Bra-017747 Brassica rapa 31.60 4.00e-35 139.00
IUUC-Cel-018698 Caenorhabditis elegans 30.18 3.00e-27 114.00
IUUC-Cja-019434 Callithrix jacchus 38.76 5.00e-35 139.00
IUUC-Cfa-020902 Canis familiaris 38.25 4.00e-35 139.00
IUUC-Cre-022885 Chlamydomonas reinhardtii 42.86 6.00e-33 132.00
IUUC-Csa-023933 Chlorocebus sabaeus 31.71 4.00e-34 136.00
IUUC-Cho-024587 Choloepus hoffmanni 41.80 4.00e-23 99.80
IUUC-Cin-025328 Ciona intestinalis 44.83 1.00e-35 141.00
IUUC-Csv-026148 Ciona savignyi 45.99 1.00e-35 141.00
IUUC-Cgl-026700 Colletotrichum gloeosporioides 51.41 8.00e-42 162.00
IUUC-Cne-026816 Cryptococcus neoformans 45.81 2.00e-37 147.00
IUUC-Dre-027744 Danio rerio 36.32 4.00e-37 146.00
IUUC-Dse-031155 Dothistroma septosporum 52.73 4.00e-47 179.00
IUUC-Dme-031788 Drosophila melanogaster 37.70 3.00e-34 137.00
IUUC-Ete-033013 Echinops telfairi 39.88 2.00e-35 140.00
IUUC-Eca-033460 Equus caballus 38.25 3.00e-35 140.00
IUUC-Fca-035525 Felis catus 38.55 3.00e-35 140.00
IUUC-Fal-037206 Ficedula albicollis 34.82 1.00e-35 141.00
IUUC-Fox-037959 Fusarium oxysporum 39.80 2.00e-41 160.00
IUUC-Fso-038348 Fusarium solani 35.69 2.00e-42 163.00
IUUC-Gmo-038718 Gadus morhua 36.71 3.00e-35 140.00
IUUC-Ggr-040114 Gaeumannomyces graminis 41.50 5.00e-45 172.00
IUUC-Gga-041037 Gallus gallus 35.27 7.00e-36 142.00
IUUC-Gac-042103 Gasterosteus aculeatus 34.20 3.00e-36 143.00
IUUC-Gma-043581 Glycine max 31.98 4.00e-38 149.00
IUUC-Ggo-044906 Gorilla gorilla 38.76 7.00e-35 139.00
IUUC-Hsa-047000 Homo sapiens 38.76 7.00e-35 139.00
IUUC-Hvu-047578 Hordeum vulgare 32.20 3.00e-18 81.60
IUUC-Itr-048102 Ictidomys tridecemlineatus 37.85 4.00e-35 139.00
IUUC-Kpa-049320 Komagataella pastoris 54.55 3.00e-46 176.00
IUUC-Lch-050488 Latimeria chalumnae 34.19 7.00e-37 145.00
IUUC-Lpe-051156 Leersia perrieri 38.36 2.00e-28 117.00
IUUC-Loc-052670 Lepisosteus oculatus 33.46 1.00e-37 148.00
IUUC-Lma-053326 Leptosphaeria maculans 40.33 1.00e-47 181.00
IUUC-Laf-053570 Loxodonta africana 39.33 3.00e-35 140.00
IUUC-Mcc-055375 Macaca mulatta 38.76 6.00e-35 139.00
IUUC-Meu-056191 Macropus eugenii 39.05 5.00e-35 139.00
IUUC-Mor-057193 Magnaporthe oryzae 43.30 3.00e-44 170.00
IUUC-Mpo-057603 Magnaporthe poae 43.85 1.00e-45 174.00
IUUC-Mtr-058182 Medicago truncatula 36.13 2.00e-39 154.00
IUUC-Mla-058921 Melampsora laricipopulina 38.20 2.00e-32 129.00
IUUC-Mga-059281 Meleagris gallopavo 36.21 3.00e-36 143.00
IUUC-Mvi-060317 Microbotryum violaceum 43.97 2.00e-32 131.00
IUUC-Mmr-061744 Microcebus murinus 39.29 1.00e-34 137.00
IUUC-Mmu-063426 Mus musculus 34.22 6.00e-36 142.00
IUUC-Mac-065265 Musa acuminata 32.00 1.00e-30 124.00
IUUC-Mpu-066867 Mustela putorius furo 39.34 4.00e-36 142.00
IUUC-Mlu-067828 Myotis lucifugus 33.21 3.00e-35 140.00
IUUC-Nfi-068575 Neosartorya fischeri 40.00 1.00e-43 168.00
IUUC-Ncr-068828 Neurospora crassa 46.88 1.00e-39 155.00
IUUC-Nle-069137 Nomascus leucogenys 38.76 5.00e-35 139.00
IUUC-Ont-071497 Oreochromis niloticus 39.78 7.00e-36 142.00
IUUC-Oan-073182 Ornithorhynchus anatinus 38.33 4.00e-35 139.00
IUUC-Ocu-073949 Oryctolagus cuniculus 39.34 1.00e-35 141.00
IUUC-Oba-075693 Oryza barthii 39.86 1.00e-28 118.00
IUUC-Obr-076128 Oryza brachyantha 40.00 2.00e-28 117.00
IUUC-Ogl-077323 Oryza glaberrima 39.86 1.00e-28 118.00
IUUC-Ogu-078766 Oryza glumaepatula 39.86 1.00e-28 118.00
IUUC-Oin-080054 Oryza indica 39.86 1.00e-28 118.00
IUUC-Olo-080325 Oryza longistaminata 42.15 1.00e-25 108.00
IUUC-Ome-081331 Oryza meridionalis 40.56 5.00e-29 119.00
IUUC-Oni-082786 Oryza nivara 39.86 9.00e-29 118.00
IUUC-Opu-083855 Oryza punctata 39.86 1.00e-28 118.00
IUUC-Oru-084304 Oryza rufipogon 39.86 1.00e-28 118.00
IUUC-Osa-086166 Oryza sativa 40.56 1.00e-28 118.00
IUUC-Ola-086368 Oryzias latipes 51.20 9.00e-37 145.00
IUUC-Olu-087624 Ostreococcus lucimarinus 41.29 1.00e-32 130.00
IUUC-Oga-088080 Otolemur garnettii 34.96 4.00e-37 146.00
IUUC-Oar-089934 Ovis aries 38.59 1.00e-35 141.00
IUUC-Ptr-090827 Pan troglodytes 38.76 6.00e-35 139.00
IUUC-Pan-092245 Papio anubis 38.76 6.00e-35 139.00
IUUC-Psi-093790 Pelodiscus sinensis 33.08 8.00e-36 141.00
IUUC-Pma-094326 Petromyzon marinus 33.70 2.00e-38 150.00
IUUC-Pno-095057 Phaeosphaeria nodorum 52.98 5.00e-48 182.00
IUUC-Ppa-095690 Physcomitrella patens 33.47 6.00e-36 142.00
IUUC-Pfo-097026 Poecilia formosa 34.67 2.00e-36 144.00
IUUC-Pab-098689 Pongo abelii 38.76 7.00e-35 139.00
IUUC-Pca-100687 Procavia capensis 40.11 5.00e-35 139.00
IUUC-Ppe-101155 Prunus persica 35.50 2.00e-37 147.00
IUUC-Pgr-103440 Puccinia graminis 50.38 7.00e-38 149.00
IUUC-Ptt-103893 Puccinia triticina 28.67 5.00e-24 102.00
IUUC-Pte-104377 Pyrenophora teres 43.95 4.00e-48 182.00
IUUC-Pyt-104731 Pyrenophora triticirepentis 43.50 1.00e-47 181.00
IUUC-Rno-105967 Rattus norvegicus 37.16 6.00e-34 135.00
IUUC-Sce-106215 Saccharomyces cerevisiae 45.00 9.00e-37 144.00
IUUC-Sha-107587 Sarcophilus harrisii 39.64 3.00e-33 133.00
IUUC-Sja-107955 Schizosaccharomyces japonicus 45.11 2.00e-111 394.00
IUUC-Smo-108930 Selaginella moellendorffii 48.23 9.00e-39 152.00
IUUC-Sit-110234 Setaria italica 37.50 9.00e-31 125.00
IUUC-Sly-111790 Solanum lycopersicum 42.47 5.00e-35 138.00
IUUC-Stu-111994 Solanum tuberosum 36.71 8.00e-38 149.00
IUUC-Sar-113374 Sorex araneus 39.25 5.00e-36 142.00
IUUC-Sbi-114766 Sorghum bicolor 38.36 7.00e-33 132.00
IUUC-Sre-115021 Sporisorium reilianum 38.30 5.00e-38 149.00
IUUC-Ssc-115474 Sus scrofa 38.80 7.00e-36 142.00
IUUC-Tgu-116649 Taeniopygia guttata 34.23 2.00e-35 140.00
IUUC-Tru-117701 Takifugu rubripes 39.56 7.00e-37 145.00
IUUC-Tni-120607 Tetraodon nigroviridis 33.69 6.00e-37 145.00
IUUC-Tca-121278 Theobroma cacao 38.41 1.00e-28 118.00
IUUC-Tre-122006 Trichoderma reesei 40.88 1.00e-38 151.00
IUUC-Tvi-122670 Trichoderma virens 41.99 2.00e-42 164.00
IUUC-Tae-122716 Triticum aestivum 39.62 8.00e-36 142.00
IUUC-Tur-126208 Triticum urartu 39.62 9.00e-36 142.00
IUUC-Tme-126908 Tuber melanosporum 50.31 4.00e-42 163.00
IUUC-Tbe-127394 Tupaia belangeri 38.25 6.00e-35 139.00
IUUC-Uma-129339 Ustilago maydis 44.44 2.00e-40 157.00
IUUC-Vda-129895 Verticillium dahliae 43.72 6.00e-45 172.00
IUUC-Vpa-130519 Vicugna pacos 33.33 7.00e-35 138.00
IUUC-Vvi-131382 Vitis vinifera 33.07 6.00e-32 129.00
IUUC-Xtr-131923 Xenopus tropicalis 34.59 4.00e-37 146.00
IUUC-Xma-133705 Xiphophorus maculatus 34.51 7.00e-38 149.00
IUUC-Yli-134518 Yarrowia lipolytica 42.95 9.00e-37 144.00
IUUC-Zma-135029 Zea mays 40.85 6.00e-30 122.00
Created Date 25-Jun-2017

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